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Project measure / variable:   Bennett4   CHOL_post_HP

ID, description, units MPD:114755   CHOL_post_HP   plasma cholesterol amount, post-diet   [mg/dL]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure lipid profile
Ontology mappings

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  STRAIN COMPARISON PLOT
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Bennett4 - plasma cholesterol amount, post-diet HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means113.6   mg/dL
Median of the strain means111.7   mg/dL
SD of the strain means± 23.089
Coefficient of variation (CV)0.2033
Min–max range of strain means73.05   –   156.6   mg/dL
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 46585.2897 2218.3471 4.9169 < 0.0001
Residuals 78 35191.0233 451.167


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 118.0 6.7503   5 3.0188 0.0572 109.2, 126.0 0.19
CC002/Unc f 133.1 16.386   5 7.3279 0.1231 113.8, 155.1 0.85
CC004/TauUnc f 85.52 11.228   5 5.0211 0.1313 76.5, 104.4 -1.21
CC006/TauUnc f 156.6 35.064   4 17.532 0.2239 104.1, 176.7 1.86
CC008/GeniUnc f 81.52 19.108   4 9.5541 0.2344 70.8, 110.1 -1.39
CC011/Unc f 137.1 18.029   5 8.0627 0.1315 107.7, 156.3 1.02
CC012/GeniUnc f 108.9 11.578   5 5.1779 0.1063 98.1, 124.5 -0.2
CC019/TauUnc f 91.8 8.1554   5 3.6472 0.0888 80.7, 102.3 -0.94
CC024/GeniUnc f 73.05 9.5459   2   6.75 0.1307 66.3, 79.8 -1.75
CC027/GeniUnc f 133.6 20.762   5 9.285 0.1554 112.2, 167.7 0.87
CC028/GeniUnc f 99.44 18.855   4 9.4277 0.1896 81.15, 116.2 -0.61
CC030/GeniUnc f 153.1 5.2751   5 2.3591 0.0345 146.8, 159.9 1.71
CC032/GeniUnc f 98.64 20.162   5 9.0167 0.2044 64.8, 113.4 -0.65
CC035/Unc f 111.6 17.391   5 7.7775 0.1558 94.5, 141.0 -0.08
CC036/Unc f 126.0 32.429   4 16.214 0.2574 98.7, 165.0 0.54
CC037/TauUnc f 101.5 39.473   5 17.653 0.3888 78.0, 171.6 -0.52
CC040/TauUnc f 103.4 24.274   5 10.856 0.2348 71.1, 136.5 -0.44
CC041/TauUnc f 146.9 40.299   5 18.022 0.2744 86.4, 199.5 1.44
CC045/GeniUnc f 111.8 11.366   4 5.6832 0.1016 97.05, 124.7 -0.08
CC059/TauUnc f 119.2 11.645   5 5.2077 0.0977 108.0, 138.9 0.24
CC063/Unc f 91.4 9.8423   3 5.6824 0.1077 80.1, 98.1 -0.96
CC071/TauUnc f 116.0 18.382   5 8.2205 0.1585 97.5, 143.1 0.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 118.02 9.4991259072 136.9313069685 99.1086930315
CC002/Unc f 133.14 9.4991259072 152.0513069685 114.2286930315
CC004/TauUnc f 85.524 9.4991259072 104.4353069685 66.6126930315
CC006/TauUnc f 156.625 10.6203456276 177.7684839625 135.4815160375
CC008/GeniUnc f 81.525 10.6203456276 102.6684839625 60.3815160375
CC011/Unc f 137.1 9.4991259072 156.0113069685 118.1886930315
CC012/GeniUnc f 108.9 9.4991259072 127.8113069685 89.9886930315
CC019/TauUnc f 91.8 9.4991259072 110.7113069685 72.8886930315
CC024/GeniUnc f 73.05 15.0194368237 102.9514017756 43.1485982244
CC027/GeniUnc f 133.62 9.4991259072 152.5313069685 114.7086930315
CC028/GeniUnc f 99.4375 10.6203456276 120.5809839625 78.2940160375
CC030/GeniUnc f 153.08 9.4991259072 171.9913069685 134.1686930315
CC032/GeniUnc f 98.64 9.4991259072 117.5513069685 79.7286930315
CC035/Unc f 111.6 9.4991259072 130.5113069685 92.6886930315
CC036/Unc f 126.0 10.6203456276 147.1434839625 104.8565160375
CC037/TauUnc f 101.52 9.4991259072 120.4313069685 82.6086930315
CC040/TauUnc f 103.38 9.4991259072 122.2913069685 84.4686930315
CC041/TauUnc f 146.88 9.4991259072 165.7913069685 127.9686930315
CC045/GeniUnc f 111.8375 10.6203456276 132.9809839625 90.6940160375
CC059/TauUnc f 119.16 9.4991259072 138.0713069685 100.2486930315
CC063/Unc f 91.4 12.263318814 115.8143923147 66.9856076853
CC071/TauUnc f 115.98 9.4991259072 134.8913069685 97.0686930315




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA