Project measure / variable:   Bennett4   UREA_base_HFHS

ID, description, units MPD:114750   UREA_base_HFHS   plasma urea/BUN amount, baseline   [mmol/L]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Bennett4 - plasma urea/BUN amount, baseline HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means7.3601   mmol/L
Median of the strain means7.3595   mmol/L
SD of the strain means± 1.2836
Coefficient of variation (CV)0.1744
Min–max range of strain means4.794   –   10.475   mmol/L
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 146.3145 6.9674 3.074 0.0002
Residuals 79 179.0581 2.2666


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 6.809 1.6276   5 0.72789 0.239 4.89, 9.28 -0.43
CC002/Unc f 6.849 0.61166   5 0.27354 0.0893 6.3, 7.53 -0.4
CC004/TauUnc f 8.71 1.3624   5 0.60929 0.1564 7.05, 10.29 1.05
CC006/TauUnc f 7.86 0.5008   4 0.2504 0.0637 7.23, 8.43 0.39
CC008/GeniUnc f 6.7713 1.5619   4 0.78095 0.2307 5.445, 8.89 -0.46
CC011/Unc f 8.235 1.6599   5 0.74234 0.2016 5.49, 9.51 0.68
CC012/GeniUnc f 8.79 2.0432   5 0.91375 0.2324 6.63, 11.25 1.11
CC019/TauUnc f 7.698 1.6581   5 0.74154 0.2154 5.775, 9.48 0.26
CC024/GeniUnc f 6.3975 0.11667   2   0.0825 0.0182 6.315, 6.48 -0.75
CC027/GeniUnc f 7.021 1.6203   5 0.72461 0.2308 5.34, 9.705 -0.26
CC028/GeniUnc f 5.835 1.4887   4 0.74433 0.2551 4.23, 7.71 -1.19
CC030/GeniUnc f 7.989 1.0205   5 0.45639 0.1277 6.84, 9.435 0.49
CC032/GeniUnc f 8.16 2.0037   5 0.8961 0.2456 6.945, 11.7 0.62
CC035/Unc f 6.774 1.2766   5 0.5709 0.1885 5.31, 8.43 -0.46
CC036/Unc f 6.9802 0.9916   5 0.44346 0.1421 5.505, 8.25 -0.3
CC037/TauUnc f 7.7353 0.70642   5 0.31592 0.0913 7.02, 8.6167 0.29
CC040/TauUnc f 7.776 1.4499   5 0.6484 0.1865 5.94, 9.75 0.32
CC041/TauUnc f 5.109 1.5253   5 0.68212 0.2985 3.66, 7.665 -1.75
CC045/GeniUnc f 8.5875 1.5746   4 0.78731 0.1834 7.32, 10.77 0.96
CC059/TauUnc f 4.794 1.4194   5 0.6348 0.2961 3.0, 6.39 -2.0
CC063/Unc f 10.475 2.3885   3 1.379 0.228 7.89, 12.6 2.43
CC071/TauUnc f 6.567 2.1385   5 0.95639 0.3257 4.68, 10.05 -0.62


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 6.809 0.6732843012 8.1491388789 5.4688611211
CC002/Unc f 6.849 0.6732843012 8.1891388789 5.5088611211
CC004/TauUnc f 8.71 0.6732843012 10.0501388789 7.3698611211
CC006/TauUnc f 7.86 0.7527547329 9.3583208163 6.3616791837
CC008/GeniUnc f 6.77125 0.7527547329 8.2695708163 5.2729291837
CC011/Unc f 8.235 0.6732843012 9.5751388789 6.8948611211
CC012/GeniUnc f 8.79 0.6732843012 10.1301388789 7.4498611211
CC019/TauUnc f 7.698 0.6732843012 9.0381388789 6.3578611211
CC024/GeniUnc f 6.3975 1.0645559524 8.5164456192 4.2785543808
CC027/GeniUnc f 7.021 0.6732843012 8.3611388789 5.6808611211
CC028/GeniUnc f 5.835 0.7527547329 7.3333208163 4.3366791837
CC030/GeniUnc f 7.989 0.6732843012 9.3291388789 6.6488611211
CC032/GeniUnc f 8.16 0.6732843012 9.5001388789 6.8198611211
CC035/Unc f 6.774 0.6732843012 8.1141388789 5.4338611211
CC036/Unc f 6.9802 0.6732843012 8.3203388789 5.6400611211
CC037/TauUnc f 7.73534 0.6732843012 9.0754788789 6.3952011211
CC040/TauUnc f 7.776 0.6732843012 9.1161388789 6.4358611211
CC041/TauUnc f 5.109 0.6732843012 6.4491388789 3.7688611211
CC045/GeniUnc f 8.5875 0.7527547329 10.0858208163 7.0891791837
CC059/TauUnc f 4.794 0.6732843012 6.1341388789 3.4538611211
CC063/Unc f 10.475 0.8692062953 12.2051118532 8.7448881468
CC071/TauUnc f 6.567 0.6732843012 7.9071388789 5.2268611211




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA