Project measure / variable:   Bennett4   UREA_base_HP

ID, description, units MPD:114749   UREA_base_HP   plasma urea/BUN amount, baseline   [mmol/L]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Bennett4 - plasma urea/BUN amount, baseline HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means7.1604   mmol/L
Median of the strain means6.9261   mmol/L
SD of the strain means± 1.1769
Coefficient of variation (CV)0.1644
Min–max range of strain means5.202   –   9.828   mmol/L
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 134.5577 6.4075 2.9982 0.0002
Residuals 79 168.8339 2.1371


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 7.629 1.4352   5 0.64185 0.1881 6.135, 9.96 0.4
CC002/Unc f 6.754 1.3179   5 0.58939 0.1951 5.07, 8.19 -0.35
CC004/TauUnc f 7.5221 1.5523   5 0.6942 0.2064 6.1053, 9.32 0.31
CC006/TauUnc f 6.8475 1.0958   4 0.54791 0.16 5.67, 8.04 -0.27
CC008/GeniUnc f 6.82 1.1132   4 0.5566 0.1632 5.82, 8.28 -0.29
CC011/Unc f 8.016 1.6735   5 0.7484 0.2088 5.67, 10.38 0.73
CC012/GeniUnc f 9.828 2.7424   5 1.2264 0.279 6.75, 13.11 2.27
CC019/TauUnc f 6.492 1.3551   5 0.60601 0.2087 5.28, 8.07 -0.57
CC024/GeniUnc f 6.105 0.23335   2   0.165 0.0382 5.94, 6.27 -0.9
CC027/GeniUnc f 6.378 0.74838   5 0.33468 0.1173 5.04, 6.75 -0.66
CC028/GeniUnc f 5.7225 0.6647   4 0.33235 0.1162 5.22, 6.69 -1.22
CC030/GeniUnc f 8.854 1.1589   5 0.51827 0.1309 8.01, 10.83 1.44
CC032/GeniUnc f 7.836 2.2928   5 1.0254 0.2926 5.82, 11.52 0.57
CC035/Unc f 5.901 0.52087   5 0.23294 0.0883 5.1, 6.48 -1.07
CC036/Unc f 7.29 0.8869   5 0.39664 0.1217 6.39, 8.22 0.11
CC037/TauUnc f 8.154 0.65466   5 0.29277 0.0803 7.5, 9.21 0.84
CC040/TauUnc f 8.305 1.322   5 0.59123 0.1592 6.36, 9.54 0.97
CC041/TauUnc f 5.202 0.9771   5 0.43697 0.1878 3.87, 6.33 -1.66
CC045/GeniUnc f 7.0046 1.6588   4 0.82942 0.2368 5.1, 9.1482 -0.13
CC059/TauUnc f 5.799 1.7604   5 0.78729 0.3036 3.855, 8.58 -1.16
CC063/Unc f 8.77 1.9512   3 1.1265 0.2225 6.6, 10.38 1.37
CC071/TauUnc f 6.3 1.8039   5 0.80672 0.2863 5.16, 9.48 -0.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 7.629 0.6537795477 8.9303156381 6.3276843619
CC002/Unc f 6.754 0.6537795477 8.0553156381 5.4526843619
CC004/TauUnc f 7.52206 0.6537795477 8.8233756381 6.2207443619
CC006/TauUnc f 6.8475 0.7309477555 8.3024151135 5.3925848865
CC008/GeniUnc f 6.82 0.7309477555 8.2749151135 5.3650848865
CC011/Unc f 8.016 0.6537795477 9.3173156381 6.7146843619
CC012/GeniUnc f 9.828 0.6537795477 11.1293156381 8.5266843619
CC019/TauUnc f 6.492 0.6537795477 7.7933156381 5.1906843619
CC024/GeniUnc f 6.105 1.0337162292 8.1625606856 4.0474393144
CC027/GeniUnc f 6.378 0.6537795477 7.6793156381 5.0766843619
CC028/GeniUnc f 5.7225 0.7309477555 7.1774151135 4.2675848865
CC030/GeniUnc f 8.854 0.6537795477 10.1553156381 7.5526843619
CC032/GeniUnc f 7.836 0.6537795477 9.1373156381 6.5346843619
CC035/Unc f 5.901 0.6537795477 7.2023156381 4.5996843619
CC036/Unc f 7.29 0.6537795477 8.5913156381 5.9886843619
CC037/TauUnc f 8.154 0.6537795477 9.4553156381 6.8526843619
CC040/TauUnc f 8.305 0.6537795477 9.6063156381 7.0036843619
CC041/TauUnc f 5.202 0.6537795477 6.5033156381 3.9006843619
CC045/GeniUnc f 7.00455 0.7309477555 8.4594651135 5.5496348865
CC059/TauUnc f 5.799 0.6537795477 7.1003156381 4.4976843619
CC063/Unc f 8.77 0.8440257668 10.4499912649 7.0900087351
CC071/TauUnc f 6.3 0.6537795477 7.6013156381 4.9986843619




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA