Project measure / variable:   CSNA03   correct_cc_acq_Binghamton

ID, description, units MPD:112893   correct_cc_acq_Binghamton   total number of correct responses (successful response in central nose poke hole with subsequent response in correct flanking hole) (reversal learning assay), CC   [n]  acquisition  
Data set, strains CSNA03   CC w/par   18 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - total number of correct responses (successful response in central nose poke hole with subsequent response in correct flanking hole) (reversal learning assay), CC acquisition

CC006/TauUncJWSB/EiJCAST/EiJCC032/GeniUncJA/JCC025/GeniUncJPWK/PhJCC004/TauUncJNOD/ShiLtJ129S1/SvImJCC028/GeniUncJCC012/GeniUncJCC061/GeniUncJC57BL/6JNZO/HlLtJCC041/TauUncJCC002/UncJCC011/UncJ n 20406080100120140160femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains18 strains
Mean of the strain means43.185   n 52.64   n
Median of the strain means43.857   n 52.04   n
SD of the strain means± 12.68 ± 13.139
Coefficient of variation (CV)0.2936 0.2496
Min–max range of strain means25.333   –   67.67   n 30.333   –   83.33   n
Mean sample size per strain4.4   mice 4.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3412.4624 3412.4624 4.689 0.0324
strain 16 10138.5462 633.6591 0.8707 0.6037
sex:strain 16 9908.9199 619.3075 0.851 0.6259
Residuals 117 85147.2238 727.754


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 36 (36)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 42.714 14.716   7 5.5623 0.3445 26.0, 63.0 -0.04
129S1/SvImJ m 48.6 21.443   5 9.5896 0.4412 22.0, 74.0 -0.31
A/J f 48.5 30.807   6 12.577 0.6352 19.0, 106.0 0.42
A/J m 63.0 25.784   6 10.526 0.4093 39.0, 104.0 0.79
C57BL/6J f 47.167 27.607   6 11.271 0.5853 16.0, 97.0 0.31
C57BL/6J m 39.667 32.235   6 13.16 0.8126 16.0, 86.0 -0.99
CAST/EiJ f 48.286 20.122   7 7.6055 0.4167 18.0, 70.0 0.4
CAST/EiJ m 67.25 19.5   4 9.75 0.29 51.0, 95.0 1.11
CC002/UncJ f 35.667 13.317   3 7.6884 0.3734 21.0, 47.0 -0.59
CC002/UncJ m 33.0 18.385   2   13.0 0.5571 20.0, 46.0 -1.49
CC004/TauUncJ f 36.0 21.802   4 10.901 0.6056 20.0, 68.0 -0.57
CC004/TauUncJ m 65.0 47.12   7 17.81 0.7249 17.0, 163.0 0.94
CC006/TauUncJ f 67.67 39.804   3 22.981 0.5882 22.0, 95.0 1.93
CC006/TauUncJ m 53.67 13.503   3 7.796 0.2516 40.0, 67.0 0.08
CC011/UncJ f 25.333 9.2376   3 5.3333 0.3646 20.0, 36.0 -1.41
CC011/UncJ m 30.333 7.5719   3 4.3716 0.2496 25.0, 39.0 -1.7
CC012/GeniUncJ f 30.667 19.502   3 11.26 0.6359 17.0, 53.0 -0.99
CC012/GeniUncJ m 58.0 16.093   3 9.2916 0.2775 43.0, 75.0 0.41
CC025/GeniUncJ f 56.0 0.0   1   0.0 0.0 56.0, 56.0 1.01
CC025/GeniUncJ m 51.0 22.627   2   16.0 0.4437 35.0, 67.0 -0.12
CC028/GeniUncJ f 25.333 6.4291   3 3.7118 0.2538 18.0, 30.0 -1.41
CC028/GeniUncJ m 64.0 24.576   3 14.189 0.384 46.0, 92.0 0.86
CC032/GeniUncJ f 31.5 20.506   2   14.5 0.651 17.0, 46.0 -0.92
CC032/GeniUncJ m 83.33 29.366   3 16.954 0.3524 57.0, 115.0 2.34
CC041/TauUncJ f 31.833 15.613   6 6.374 0.4905 17.0, 60.0 -0.9
CC041/TauUncJ m 47.4 21.161   5 9.4636 0.4464 21.0, 72.0 -0.4
CC061/GeniUncJ f 46.333 34.948   3 20.177 0.7543 17.0, 85.0 0.25
CC061/GeniUncJ m 42.0 30.79   3 17.776 0.7331 16.0, 76.0 -0.81
NOD/ShiLtJ f 38.0 25.308   5 11.318 0.666 17.0, 68.0 -0.41
NOD/ShiLtJ m 56.2 44.628   5 19.958 0.7941 18.0, 129.0 0.27
NZO/HlLtJ f 45.0 14.095   7 5.3274 0.3132 32.0, 65.0 0.14
NZO/HlLtJ m 41.0 29.743   4 14.872 0.7254 16.0, 84.0 -0.89
PWK/PhJ f 54.33 35.562   6 14.518 0.6545 17.0, 112.0 0.88
PWK/PhJ m 52.33 36.8   6 15.024 0.7032 16.0, 111.0 -0.02
WSB/EiJ f 67.0 19.026   5 8.5088 0.284 47.0, 91.0 1.88
WSB/EiJ m 51.75 19.346   4 9.6728 0.3738 24.0, 69.0 -0.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 42.7142857143 10.1963162091 62.907555666 22.5210157625
129S1/SvImJ m 48.6 12.0644440374 72.4929992233 24.7070007767
A/J f 48.5 11.0132802384 70.3112244017 26.6887755983
A/J m 63.0 11.0132802384 84.8112244017 41.1887755983
C57BL/6J f 47.1666666667 11.0132802384 68.9778910684 25.3554422649
C57BL/6J m 39.6666666667 11.0132802384 61.4778910684 17.8554422649
CAST/EiJ f 48.2857142857 10.1963162091 68.4789842375 28.092444334
CAST/EiJ m 67.25 13.4884584891 93.9631852248 40.5368147752
CC002/UncJ f 35.6666666667 15.5751302793 66.5123960275 4.8209373058
CC002/UncJ m 33.0 19.0755609309 70.7781488391 -4.7781488391
CC004/TauUncJ f 36.0 13.4884584891 62.7131852248 9.2868147752
CC004/TauUncJ m 65.0 10.1963162091 85.1932699518 44.8067300482
CC006/TauUncJ f 67.6666666667 15.5751302793 98.5123960275 36.8209373058
CC006/TauUncJ m 53.6666666667 15.5751302793 84.5123960275 22.8209373058
CC011/UncJ f 25.3333333333 15.5751302793 56.1790626942 -5.5123960275
CC011/UncJ m 30.3333333333 15.5751302793 61.1790626942 -0.5123960275
CC012/GeniUncJ f 30.6666666667 15.5751302793 61.5123960275 -0.1790626942
CC012/GeniUncJ m 58.0 15.5751302793 88.8457293609 27.1542706391
CC028/GeniUncJ f 25.3333333333 15.5751302793 56.1790626942 -5.5123960275
CC028/GeniUncJ m 64.0 15.5751302793 94.8457293609 33.1542706391
CC032/GeniUncJ f 31.5 19.0755609309 69.2781488391 -6.2781488391
CC032/GeniUncJ m 83.3333333333 15.5751302793 114.1790626942 52.4876039725
CC041/TauUncJ f 31.8333333333 11.0132802384 53.6445577351 10.0221089316
CC041/TauUncJ m 47.4 12.0644440374 71.2929992233 23.5070007767
CC061/GeniUncJ f 46.3333333333 15.5751302793 77.1790626942 15.4876039725
CC061/GeniUncJ m 42.0 15.5751302793 72.8457293609 11.1542706391
NOD/ShiLtJ f 38.0 12.0644440374 61.8929992233 14.1070007767
NOD/ShiLtJ m 56.2 12.0644440374 80.0929992233 32.3070007767
NZO/HlLtJ f 45.0 10.1963162091 65.1932699518 24.8067300482
NZO/HlLtJ m 41.0 13.4884584891 67.7131852248 14.2868147752
PWK/PhJ f 54.3333333333 11.0132802384 76.1445577351 32.5221089316
PWK/PhJ m 52.3333333333 11.0132802384 74.1445577351 30.5221089316
WSB/EiJ f 67.0 12.0644440374 90.8929992233 43.1070007767
WSB/EiJ m 51.75 13.4884584891 78.4631852248 25.0368147752


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 45.6571428571 7.8980325741 61.2987825029 30.0155032114
A/J both 55.75 7.7875651397 71.1728646804 40.3271353196
C57BL/6J both 43.4166666667 7.7875651397 58.8395313471 27.9938019862
CAST/EiJ both 57.7678571429 8.4543387774 74.5112320729 41.0244822128
CC002/UncJ both 34.3333333333 12.3132216341 58.7190235507 9.947643116
CC004/TauUncJ both 50.5 8.4543387774 67.2433749301 33.7566250699
CC006/TauUncJ both 60.6666666667 11.0132802384 82.4778910684 38.8554422649
CC011/UncJ both 27.8333333333 11.0132802384 49.6445577351 6.0221089316
CC012/GeniUncJ both 44.3333333333 11.0132802384 66.1445577351 22.5221089316
CC028/GeniUncJ both 44.6666666667 11.0132802384 66.4778910684 22.8554422649
CC032/GeniUncJ both 57.4166666667 12.3132216341 81.802356884 33.0309764493
CC041/TauUncJ both 39.6166666667 8.1676672242 55.7923036076 23.4410297257
CC061/GeniUncJ both 44.1666666667 11.0132802384 65.9778910684 22.3554422649
NOD/ShiLtJ both 47.1 8.5308501901 63.9949017737 30.2050982263
NZO/HlLtJ both 43.0 8.4543387774 59.7433749301 26.2566250699
PWK/PhJ both 53.3333333333 7.7875651397 68.7561980138 37.9104686529
WSB/EiJ both 59.375 9.048333028 77.2947494174 41.4552505826




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA