Project measure / variable:   Schoonjans1   TUDCA_plasma_t60_HFD

ID, description, units MPD:112749   TUDCA_plasma_t60_HFD   plasma bile acid tauroursodeoxycholic acid amount, glucose kinetic test, at 20 wks of age, after 60 min   [ng/mL]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure biomarker quantification
Ontology mappings

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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means44.754   ng/mL
Median of the strain means38.067   ng/mL
SD of the strain means± 30.616
Coefficient of variation (CV)0.6841
Min–max range of strain means4.5698   –   132.8   ng/mL
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 144308.322 4123.0949 6.3098 < 0.0001
Residuals 121 79066.4961 653.4421


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 36 (36)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 12.316 1.9782   5 0.88469 0.1606 9.642, 14.612 -1.06
BXD100 m 17.671 10.084   9 3.3612 0.5706 1.936, 32.354 -0.88
BXD11 m 36.277 23.251   3 13.424 0.6409 18.112, 62.48 -0.28
BXD12 m 85.06 75.14   4 37.572 0.8834 25.422, 192.9 1.32
BXD27 m 46.023 20.212   5 9.0391 0.4392 31.746, 79.19 0.04
BXD32 m 14.673 5.9435   4 2.9717 0.4051 9.724, 22.934 -0.98
BXD34 m 41.072 12.226   4 6.1129 0.2977 25.478, 53.44 -0.12
BXD39 m 30.601 21.95   3 12.673 0.7173 16.934, 55.92 -0.46
BXD40 m 114.7 17.965   4 8.9827 0.1566 92.89, 131.7 2.28
BXD43 m 21.983 7.8805   5 3.5243 0.3585 16.274, 35.189 -0.74
BXD45 m 132.8 56.71   5 25.363 0.4269 72.58, 199.1 2.88
BXD48 m 65.78 21.322   5 9.5357 0.3242 40.138, 90.02 0.69
BXD48a m 83.91 26.424   4 13.212 0.3149 54.35, 110.7 1.28
BXD49 m 104.1 35.015   5 15.659 0.3363 62.25, 139.2 1.94
BXD51 m 42.633 25.458   3 14.698 0.5971 27.311, 72.02 -0.07
BXD53 m 49.304 20.909   5 9.3508 0.4241 25.332, 81.49 0.15
BXD55 m 32.511 6.7771   5 3.0308 0.2085 23.804, 39.824 -0.4
BXD6 m 27.846 24.678   5 11.036 0.8862 4.882, 56.1 -0.55
BXD62 m 43.585 11.385   4 5.6924 0.2612 30.848, 54.03 -0.04
BXD63 m 10.9 3.5798   5 1.6009 0.3284 7.572, 16.094 -1.11
BXD64 m 18.492 19.756   5 8.8352 1.0684 7.022, 53.49 -0.86
BXD66 m 30.382 5.0639   3 2.9237 0.1667 26.056, 35.952 -0.47
BXD67 m 4.5698 1.5376   5 0.68764 0.3365 2.812, 6.358 -1.31
BXD69 m 49.108 31.202   4 15.601 0.6354 21.79, 91.71 0.14
BXD73 m 27.639 12.029   3 6.9447 0.4352 15.784, 39.834 -0.56
BXD75 m 49.974 35.959   4 17.979 0.7196 24.064, 101.7 0.17
BXD77 m 36.619 34.077   5 15.239 0.9306 15.998, 96.68 -0.27
BXD79 m 29.548 18.988   5 8.4915 0.6426 12.896, 51.47 -0.5
BXD8 m 33.051 11.192   3 6.4614 0.3386 20.188, 40.556 -0.38
BXD81 m 47.15 22.757   5 10.177 0.4827 24.304, 85.18 0.08
BXD84 m 39.515 31.534   5 14.103 0.798 12.066, 93.75 -0.17
BXD87 m 24.98 11.348   4 5.6741 0.4543 16.328, 41.658 -0.65
BXD89 m 44.285 7.9052   5 3.5353 0.1785 34.248, 55.92 -0.02
BXD90 m 54.1 10.151   4 5.0753 0.1876 43.136, 63.9 0.31
C57BL/6J m 98.54 76.45   2   54.06 0.7758 44.482, 152.6 1.76
DBA/2J m 9.4612 9.2778   3 5.3566 0.9806 3.744, 20.166 -1.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 12.3164 11.4319037475 34.9488687757 -10.3160687757
BXD100 m 17.6711111111 8.5208379639 34.5403573382 0.8018648841
BXD11 m 36.2766666667 14.7585242765 65.4950582173 7.058275116
BXD12 m 85.059 12.7812569458 110.3628693406 59.7551306594
BXD27 m 46.0228 11.4319037475 68.6552687757 23.3903312243
BXD32 m 14.673 12.7812569458 39.9768693406 -10.6308693406
BXD34 m 41.072 12.7812569458 66.3758693406 15.7681306594
BXD39 m 30.6013333333 14.7585242765 59.819724884 1.3829417827
BXD40 m 114.6975 12.7812569458 140.0013693406 89.3936306594
BXD43 m 21.9834 11.4319037475 44.6158687757 -0.6490687757
BXD45 m 132.836 11.4319037475 155.4684687757 110.2035312243
BXD48 m 65.7764 11.4319037475 88.4088687757 43.1439312243
BXD48a m 83.9125 12.7812569458 109.2163693406 58.6086306594
BXD49 m 104.106 11.4319037475 126.7384687757 81.4735312243
BXD51 m 42.633 14.7585242765 71.8513915507 13.4146084493
BXD53 m 49.304 11.4319037475 71.9364687757 26.6715312243
BXD55 m 32.5108 11.4319037475 55.1432687757 9.8783312243
BXD6 m 27.8464 11.4319037475 50.4788687757 5.2139312243
BXD62 m 43.585 12.7812569458 68.8888693406 18.2811306594
BXD63 m 10.9004 11.4319037475 33.5328687757 -11.7320687757
BXD64 m 18.492 11.4319037475 41.1244687757 -4.1404687757
BXD66 m 30.382 14.7585242765 59.6003915507 1.1636084493
BXD67 m 4.56982 11.4319037475 27.2022887757 -18.0626487757
BXD69 m 49.108 12.7812569458 74.4118693406 23.8041306594
BXD73 m 27.6393333333 14.7585242765 56.857724884 -1.5790582173
BXD75 m 49.9735 12.7812569458 75.2773693406 24.6696306594
BXD77 m 36.6188 11.4319037475 59.2512687757 13.9863312243
BXD79 m 29.5484 11.4319037475 52.1808687757 6.9159312243
BXD8 m 33.0513333333 14.7585242765 62.269724884 3.8329417827
BXD81 m 47.1496 11.4319037475 69.7820687757 24.5171312243
BXD84 m 39.5148 11.4319037475 62.1472687757 16.8823312243
BXD87 m 24.9795 12.7812569458 50.2833693406 -0.3243693406
BXD89 m 44.2848 11.4319037475 66.9172687757 21.6523312243
BXD90 m 54.105 12.7812569458 79.4088693406 28.8011306594
C57BL/6J m 98.541 18.0754269169 134.326075202 62.755924798
DBA/2J m 9.4611666667 14.7585242765 38.6795582173 -19.757224884




  GWAS USING LINEAR MIXED MODELS

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