Project measure / variable:   CSNA03   period_do

ID, description, units MPD:112549   period_do   peak-to-peak interval, indicating amount of time it takes for one cycle of bioluminescence circadian rhythm, in fibroblast cultures, DO   [h]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-12wks
Procedure in vitro assay
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means24.093   h 24.116   h
Median of the strain means23.804   h 23.699   h
SD of the strain means± 1.2007 ± 0.94709
Coefficient of variation (CV)0.0498 0.0393
Min–max range of strain means23.051   –   27.13   h 23.117   –   26.315   h
Mean sample size per strain28.8   mice 23.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 55.2107 55.2107 4.8935 0.0275
strain 8 917.0876 114.6359 10.1605 < 0.0001
sex:strain 8 25.5623 3.1953 0.2832 0.9714
Residuals 451 5088.4153 11.2825


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 23.43 0.33438   10 0.10574 0.0143 22.682, 23.909 -0.55
129S1/SvImJ m 23.696 0.28409   9 0.0947 0.012 23.291, 24.084 -0.44
A/J f 24.325 0.49456   9 0.16485 0.0203 23.803, 25.529 0.19
A/J m 24.717 0.57486   10 0.18179 0.0233 24.042, 25.627 0.64
C57BL/6J f 24.07 0.26043   10 0.08236 0.0108 23.677, 24.478 -0.02
C57BL/6J m 23.608 0.35552   10 0.11243 0.0151 22.942, 24.003 -0.54
CAST/EiJ f 23.051 0.3744   10 0.11839 0.0162 22.263, 23.546 -0.87
CAST/EiJ m 23.117 0.2725   10 0.08617 0.0118 22.722, 23.695 -1.05
J:DO f 27.13 4.4089   184 0.32503 0.1625 22.475, 46.2 2.53
J:DO m 26.315 3.35   136 0.28726 0.1273 22.114, 43.396 2.32
NOD/ShiLtJ f 23.804 0.30918   9 0.10306 0.013 23.422, 24.393 -0.24
NOD/ShiLtJ m 24.032 0.31964   10 0.10108 0.0133 23.636, 24.729 -0.09
NZO/HlLtJ f 23.803 0.14394   8 0.05089 0.006 23.593, 24.096 -0.24
NZO/HlLtJ m 23.699 0.19854   7 0.07504 0.0084 23.377, 23.958 -0.44
PWK/PhJ f 23.84 0.20191   10 0.06385 0.0085 23.628, 24.284 -0.21
PWK/PhJ m 24.312 0.40052   10 0.12665 0.0165 23.82, 25.044 0.21
WSB/EiJ f 23.387 0.41155   9 0.13718 0.0176 22.647, 23.863 -0.59
WSB/EiJ m 23.544 0.29271   8 0.10349 0.0124 22.967, 23.962 -0.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 23.43 1.0621919494 25.5174598907 21.3425401093
129S1/SvImJ m 23.6957777778 1.1196486241 25.8961537041 21.4954018515
A/J f 24.3248888889 1.1196486241 26.5252648152 22.1245129626
A/J m 24.717 1.0621919494 26.8044598907 22.6295401093
C57BL/6J f 24.0704 1.0621919494 26.1578598907 21.9829401093
C57BL/6J m 23.6076 1.0621919494 25.6950598907 21.5201401093
CAST/EiJ f 23.0508 1.0621919494 25.1382598907 20.9633401093
CAST/EiJ m 23.1167 1.0621919494 25.2041598907 21.0292401093
J:DO f 27.1304021739 0.247624775 27.6170437702 26.6437605776
J:DO m 26.3154117647 0.2880272323 26.8814538019 25.7493697275
NOD/ShiLtJ f 23.8035555556 1.1196486241 26.0039314819 21.6031796292
NOD/ShiLtJ m 24.0324 1.0621919494 26.1198598907 21.9449401093
NZO/HlLtJ f 23.802625 1.187566702 26.136476108 21.468773892
NZO/HlLtJ m 23.6987142857 1.2695622065 26.1937060679 21.2037225035
PWK/PhJ f 23.8401 1.0621919494 25.9275598907 21.7526401093
PWK/PhJ m 24.3124 1.0621919494 26.3998598907 22.2249401093
WSB/EiJ f 23.387 1.1196486241 25.5873759263 21.1866240737
WSB/EiJ m 23.5445 1.187566702 25.878351108 21.210648892


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 23.5628888889 0.771664561 25.0793933409 22.0463844368
A/J both 24.5209444444 0.771664561 26.0374488965 23.0044399924
C57BL/6J both 23.839 0.7510831303 25.3150570442 22.3629429558
CAST/EiJ both 23.08375 0.7510831303 24.5598070442 21.6076929558
J:DO both 26.7229069693 0.1899195328 27.0961440358 26.3496699028
NOD/ShiLtJ both 23.9179777778 0.771664561 25.4344822298 22.4014733257
NZO/HlLtJ both 23.7506696429 0.8692098233 25.4588737428 22.042465543
PWK/PhJ both 24.07625 0.7510831303 25.5523070442 22.6001929558
WSB/EiJ both 23.46575 0.8160771583 25.0695357721 21.8619642279




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA