Project measure / variable:   Auwerx1   vo2_basal_CD

ID, description, units MPD:111308   vo2_basal_CD   basal oxygen consumption, prior to first treadmill training   [mL/kg/min]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   55 strains     sex: m     age: 23wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Auwerx1 - basal oxygen consumption, prior to first treadmill training CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested55 strains
Mean of the strain means77.01   mL/kg/min
Median of the strain means74.77   mL/kg/min
SD of the strain means± 12.727
Coefficient of variation (CV)0.1653
Min–max range of strain means54.09   –   108.6   mL/kg/min
Mean sample size per strain4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 54 34933.2474 646.912 6.4482 < 0.0001
Residuals 181 18158.6404 100.324


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 72.36 4.0278   5 1.8013 0.0557 66.3, 76.7 -0.37
BXD100 m 93.2 16.001   3 9.2381 0.1717 77.3, 109.3 1.27
BXD101 m 77.88 7.5008   4 3.7504 0.0963 72.2, 88.9 0.07
BXD11 m 100.8 17.268   2   12.21 0.1713 88.58, 113.0 1.87
BXD12 m 75.0 18.404   5 8.2306 0.2454 43.7, 89.6 -0.16
BXD16 m 54.09 3.9569   4 1.9785 0.0732 49.75, 59.3 -1.8
BXD2 m 72.04 5.0751   4 2.5376 0.0704 65.75, 77.58 -0.39
BXD27 m 70.46 7.8628   5 3.5163 0.1116 61.1, 81.5 -0.51
BXD32 m 83.5 13.631   5 6.0959 0.1632 68.2, 101.3 0.51
BXD34 m 80.2 8.6691   4 4.3346 0.1081 71.0, 91.8 0.25
BXD39 m 62.62 6.8123   5 3.0465 0.1088 52.3, 68.5 -1.13
BXD43 m 87.37 13.627   3 7.8675 0.156 72.3, 98.82 0.81
BXD44 m 78.02 14.025   9 4.675 0.1798 56.33, 98.5 0.08
BXD45 m 108.6 3.2197   4 1.6099 0.0296 106.7, 113.4 2.48
BXD48 m 56.61 4.8326   5 2.1612 0.0854 49.3, 62.5 -1.6
BXD48a m 71.04 6.7647   4 3.3823 0.0952 61.33, 76.41 -0.47
BXD49 m 66.73 8.4083   4 4.2042 0.126 59.3, 75.17 -0.81
BXD50 m 72.08 16.215   4 8.1075 0.225 52.3, 86.6 -0.39
BXD51 m 107.3 11.074   4 5.5372 0.1032 97.83, 123.3 2.38
BXD53 m 81.02 9.6761   5 4.3273 0.1194 70.4, 96.8 0.32
BXD55 m 89.89 6.1873   5 2.767 0.0688 81.6, 96.5 1.01
BXD56 m 73.67 24.085   3 13.905 0.3269 54.8, 100.8 -0.26
BXD6 m 80.37 5.1504   5 2.3033 0.0641 75.9, 88.1 0.26
BXD60 m 80.37 15.923   5 7.121 0.1981 61.83, 101.1 0.26
BXD61 m 91.83 5.8791   3 3.3943 0.064 85.58, 97.25 1.16
BXD62 m 81.75 4.3083   4 2.1542 0.0527 76.67, 86.17 0.37
BXD63 m 74.77 11.683   4 5.8413 0.1562 58.91, 86.17 -0.18
BXD64 m 75.57 9.75   4 4.875 0.129 67.4, 88.3 -0.11
BXD65 m 61.98 2.0895   4 1.0447 0.0337 59.8, 64.5 -1.18
BXD65a m 57.84 5.7055   5 2.5516 0.0986 51.9, 66.8 -1.51
BXD65b m 57.61 7.0278   4 3.5139 0.122 47.7, 63.75 -1.52
BXD66 m 65.84 8.2831   5 3.7043 0.1258 56.1, 76.17 -0.88
BXD67 m 71.34 11.05   5 4.9415 0.1549 56.0, 83.7 -0.45
BXD68 m 73.97 5.2172   3 3.0121 0.0705 69.83, 79.83 -0.24
BXD69 m 72.56 4.9475   5 2.2126 0.0682 65.9, 78.3 -0.35
BXD70 m 98.66 8.9267   4 4.4634 0.0905 86.5, 108.0 1.7
BXD71 m 72.53 3.7117   5 1.6599 0.0512 68.6, 76.1 -0.35
BXD73 m 79.54 3.7559   4 1.878 0.0472 74.0, 82.25 0.2
BXD73a m 67.44 4.361   4 2.1805 0.0647 62.67, 73.17 -0.75
BXD73b m 64.68 4.2608   5 1.9055 0.0659 59.5, 70.92 -0.97
BXD75 m 79.41 8.1461   5 3.643 0.1026 67.75, 89.33 0.19
BXD77 m 72.92 6.2452   5 2.7929 0.0856 65.3, 79.9 -0.32
BXD79 m 66.08 12.003   5 5.368 0.1816 49.7, 77.9 -0.86
BXD8 m 102.7 2.8582   4 1.4291 0.0278 101.1, 107.0 2.02
BXD81 m 75.25 6.6048   4 3.3024 0.0878 68.83, 84.2 -0.14
BXD83 m 77.96 22.614   3 13.056 0.2901 55.58, 100.8 0.07
BXD84 m 67.7 10.062   4 5.031 0.1486 54.33, 77.75 -0.73
BXD87 m 96.76 5.0407   4 2.5204 0.0521 90.83, 101.1 1.55
BXD89 m 81.29 7.6001   4 3.8 0.0935 73.67, 90.67 0.34
BXD90 m 72.92 14.064   4 7.0318 0.1929 55.83, 88.1 -0.32
BXD95 m 59.09 15.907   4 7.9536 0.2692 47.8, 82.67 -1.41
BXD98 m 71.2 4.6267   4 2.3134 0.065 65.7, 76.6 -0.46
BXD99 m 72.48 7.846   5 3.5088 0.1082 66.25, 84.67 -0.36
C57BL/6J m 96.28 5.2489   4 2.6244 0.0545 88.5, 99.83 1.51
DBA/2J m 80.25 21.016   3 12.134 0.2619 67.33, 104.5 0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 72.36 4.4793745146 81.198509368 63.521490632
BXD100 m 93.2 5.7828476322 104.6104665292 81.7895334708
BXD101 m 77.875 5.0080929557 87.7567538833 67.9932461167
BXD11 m 100.79 7.0825129796 114.7649103618 86.8150896382
BXD12 m 75.0 4.4793745146 83.838509368 66.161490632
BXD16 m 54.0875 5.0080929557 63.9692538833 44.2057461167
BXD2 m 72.04 5.0080929557 81.9217538833 62.1582461167
BXD27 m 70.46 4.4793745146 79.298509368 61.621490632
BXD32 m 83.5 4.4793745146 92.338509368 74.661490632
BXD34 m 80.2 5.0080929557 90.0817538833 70.3182461167
BXD39 m 62.62 4.4793745146 71.458509368 53.781490632
BXD43 m 87.3733333333 5.7828476322 98.7837998625 75.9628668041
BXD44 m 78.02 3.3387286371 84.6078359222 71.4321640778
BXD45 m 108.6 5.0080929557 118.4817538833 98.7182461167
BXD48 m 56.61 4.4793745146 65.448509368 47.771490632
BXD48a m 71.04 5.0080929557 80.9217538833 61.1582461167
BXD49 m 66.73 5.0080929557 76.6117538833 56.8482461167
BXD50 m 72.075 5.0080929557 81.9567538833 62.1932461167
BXD51 m 107.3075 5.0080929557 117.1892538833 97.4257461167
BXD53 m 81.02 4.4793745146 89.858509368 72.181490632
BXD55 m 89.888 4.4793745146 98.726509368 81.049490632
BXD56 m 73.6733333333 5.7828476322 85.0837998625 62.2628668041
BXD6 m 80.37 4.4793745146 89.208509368 71.531490632
BXD60 m 80.37 4.4793745146 89.208509368 71.531490632
BXD61 m 91.83 5.7828476322 103.2404665292 80.4195334708
BXD62 m 81.75 5.0080929557 91.6317538833 71.8682461167
BXD63 m 74.77 5.0080929557 84.6517538833 64.8882461167
BXD64 m 75.575 5.0080929557 85.4567538833 65.6932461167
BXD65 m 61.9825 5.0080929557 71.8642538833 52.1007461167
BXD65a m 57.84 4.4793745146 66.678509368 49.001490632
BXD65b m 57.6125 5.0080929557 67.4942538833 47.7307461167
BXD66 m 65.838 4.4793745146 74.676509368 56.999490632
BXD67 m 71.344 4.4793745146 80.182509368 62.505490632
BXD68 m 73.97 5.7828476322 85.3804665292 62.5595334708
BXD69 m 72.56 4.4793745146 81.398509368 63.721490632
BXD70 m 98.655 5.0080929557 108.5367538833 88.7732461167
BXD71 m 72.526 4.4793745146 81.364509368 63.687490632
BXD73 m 79.54 5.0080929557 89.4217538833 69.6582461167
BXD73a m 67.44 5.0080929557 77.3217538833 57.5582461167
BXD73b m 64.684 4.4793745146 73.522509368 55.845490632
BXD75 m 79.414 4.4793745146 88.252509368 70.575490632
BXD77 m 72.92 4.4793745146 81.758509368 64.081490632
BXD79 m 66.08 4.4793745146 74.918509368 57.241490632
BXD8 m 102.725 5.0080929557 112.6067538833 92.8432461167
BXD81 m 75.245 5.0080929557 85.1267538833 65.3632461167
BXD83 m 77.96 5.7828476322 89.3704665292 66.5495334708
BXD84 m 67.7025 5.0080929557 77.5842538833 57.8207461167
BXD87 m 96.765 5.0080929557 106.6467538833 86.8832461167
BXD89 m 81.2925 5.0080929557 91.1742538833 71.4107461167
BXD90 m 72.92 5.0080929557 82.8017538833 63.0382461167
BXD95 m 59.0925 5.0080929557 68.9742538833 49.2107461167
BXD98 m 71.2 5.0080929557 81.0817538833 61.3182461167
BXD99 m 72.484 4.4793745146 81.322509368 63.645490632
C57BL/6J m 96.285 5.0080929557 106.1667538833 86.4032461167
DBA/2J m 80.25 5.7828476322 91.6604665292 68.8395334708




  GWAS USING LINEAR MIXED MODELS