Project measure / variable:   Auwerx1   bw_basal_CD

ID, description, units MPD:111300   bw_basal_CD   body weight prior to basal activity test, at 23 wks of age   [g]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 23wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight prior to basal activity test, at 23 wks of age CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means36.692   g
Median of the strain means35.6   g
SD of the strain means± 5.4143
Coefficient of variation (CV)0.1476
Min–max range of strain means26.918   –   50.9   g
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 7192.1773 128.4317 9.2353 < 0.0001
Residuals 196 2725.6897 13.9066


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 30.304 2.5954   5 1.1607 0.0856 28.13, 34.71 -1.18
BXD100 m 39.4 11.537   3 6.6612 0.2928 28.11, 51.17 0.5
BXD101 m 33.828 3.821   4 1.9105 0.113 28.83, 38.02 -0.53
BXD11 m 33.237 6.8424   3 3.9505 0.2059 27.3, 40.72 -0.64
BXD12 m 30.52 0.9757   5 0.43635 0.032 29.6, 31.9 -1.14
BXD16 m 50.9 2.7845   4 1.3922 0.0547 47.1, 53.8 2.62
BXD2 m 37.883 1.4118   4 0.70591 0.0373 35.96, 39.24 0.22
BXD27 m 39.876 3.5734   5 1.5981 0.0896 35.98, 44.88 0.59
BXD32 m 34.602 2.8196   5 1.261 0.0815 31.06, 38.74 -0.39
BXD34 m 35.523 1.1274   4 0.56371 0.0317 34.24, 36.9 -0.22
BXD39 m 44.346 2.1712   5 0.97097 0.049 42.3, 47.43 1.41
BXD40 m 28.463 2.3446   3 1.3536 0.0824 27.06, 31.17 -1.52
BXD43 m 32.603 4.5234   3 2.6116 0.1387 28.72, 37.57 -0.76
BXD44 m 39.53 4.6204   9 1.5401 0.1169 33.54, 47.14 0.52
BXD45 m 32.116 1.402   5 0.62697 0.0437 30.45, 33.85 -0.85
BXD48 m 39.722 5.0047   5 2.2382 0.126 35.51, 48.32 0.56
BXD48a m 43.186 4.2911   5 1.9191 0.0994 38.66, 47.75 1.2
BXD49 m 37.528 0.94768   4 0.47384 0.0253 36.64, 38.87 0.15
BXD50 m 38.29 5.6361   4 2.818 0.1472 30.36, 43.65 0.3
BXD51 m 35.364 3.4574   5 1.5462 0.0978 32.51, 41.28 -0.25
BXD53 m 34.77 3.2746   5 1.4644 0.0942 30.95, 39.74 -0.35
BXD55 m 30.858 2.3209   5 1.038 0.0752 27.98, 32.98 -1.08
BXD56 m 33.71 0.85934   4 0.42967 0.0255 32.66, 34.53 -0.55
BXD6 m 34.184 3.2119   5 1.4364 0.094 31.22, 39.22 -0.46
BXD60 m 40.432 5.76   5 2.576 0.1425 31.54, 45.16 0.69
BXD61 m 33.437 2.1804   3 1.2588 0.0652 31.28, 35.64 -0.6
BXD62 m 32.002 2.9674   4 1.4837 0.0927 28.7, 34.54 -0.87
BXD63 m 37.425 4.6825   4 2.3412 0.1251 32.09, 42.95 0.14
BXD64 m 34.71 2.1997   4 1.0998 0.0634 32.93, 37.64 -0.37
BXD65 m 44.685 2.5553   4 1.2776 0.0572 41.48, 47.69 1.48
BXD65a m 44.704 0.51723   5 0.23131 0.0116 44.08, 45.44 1.48
BXD65b m 46.593 1.6026   4 0.8013 0.0344 44.79, 48.68 1.83
BXD66 m 44.81 6.8308   5 3.0548 0.1524 33.98, 51.69 1.5
BXD67 m 39.142 6.3714   5 2.8494 0.1628 31.82, 46.03 0.45
BXD68 m 40.907 6.1033   3 3.5237 0.1492 33.92, 45.2 0.78
BXD69 m 40.614 1.1747   5 0.52532 0.0289 39.26, 42.23 0.72
BXD70 m 31.5 7.8172   4 3.9086 0.2482 25.53, 42.81 -0.96
BXD71 m 39.418 3.9192   5 1.7527 0.0994 33.2, 44.04 0.5
BXD73 m 33.445 6.0902   4 3.0451 0.1821 29.15, 42.39 -0.6
BXD73a m 44.658 1.6079   5 0.71906 0.036 42.23, 46.7 1.47
BXD73b m 42.542 2.5292   5 1.1311 0.0595 39.91, 46.56 1.08
BXD75 m 38.684 3.1168   5 1.3939 0.0806 34.8, 42.75 0.37
BXD77 m 33.786 3.6041   5 1.6118 0.1067 28.65, 36.53 -0.54
BXD79 m 37.262 2.1151   5 0.94588 0.0568 34.53, 39.88 0.11
BXD8 m 28.385 1.0285   4 0.51427 0.0362 27.4, 29.81 -1.53
BXD81 m 28.345 5.0504   4 2.5252 0.1782 22.22, 34.03 -1.54
BXD83 m 28.6 2.0352   3 1.175 0.0712 27.17, 30.93 -1.49
BXD84 m 37.057 3.1958   4 1.5979 0.0862 32.5, 39.63 0.07
BXD85 m 47.268 2.84   5 1.2701 0.0601 42.76, 50.5 1.95
BXD87 m 26.918 1.3748   5 0.61483 0.0511 24.59, 28.2 -1.81
BXD89 m 36.25 0.9995   4 0.49975 0.0276 34.81, 36.97 -0.08
BXD90 m 30.77 1.6464   4 0.82322 0.0535 29.32, 32.26 -1.09
BXD95 m 35.317 4.2482   4 2.1241 0.1203 29.11, 38.46 -0.25
BXD98 m 35.6 2.9825   4 1.4913 0.0838 31.23, 37.65 -0.2
BXD99 m 40.116 0.76376   5 0.34156 0.019 39.73, 41.48 0.63
C57BL/6J m 31.446 1.5458   5 0.69131 0.0492 28.92, 32.94 -0.97
DBA/2J m 33.873 3.1126   4 1.5563 0.0919 29.79, 36.39 -0.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 30.304 1.6677278164 33.5929947733 27.0150052267
BXD100 m 39.4 2.153027353 43.6460739943 35.1539260057
BXD101 m 33.8275 1.8645763828 37.5047079454 30.1502920546
BXD11 m 33.2366666667 2.153027353 37.4827406609 28.9905926724
BXD12 m 30.52 1.6677278164 33.8089947733 27.2310052267
BXD16 m 50.9 1.8645763828 54.5772079454 47.2227920546
BXD2 m 37.8825 1.8645763828 41.5597079454 34.2052920546
BXD27 m 39.876 1.6677278164 43.1649947733 36.5870052267
BXD32 m 34.602 1.6677278164 37.8909947733 31.3130052267
BXD34 m 35.5225 1.8645763828 39.1997079454 31.8452920546
BXD39 m 44.346 1.6677278164 47.6349947733 41.0570052267
BXD40 m 28.4633333333 2.153027353 32.7094073276 24.2172593391
BXD43 m 32.6033333333 2.153027353 36.8494073276 28.3572593391
BXD44 m 39.53 1.2430509218 41.9814719636 37.0785280364
BXD45 m 32.116 1.6677278164 35.4049947733 28.8270052267
BXD48 m 39.722 1.6677278164 43.0109947733 36.4330052267
BXD48a m 43.186 1.6677278164 46.4749947733 39.8970052267
BXD49 m 37.5275 1.8645763828 41.2047079454 33.8502920546
BXD50 m 38.29 1.8645763828 41.9672079454 34.6127920546
BXD51 m 35.364 1.6677278164 38.6529947733 32.0750052267
BXD53 m 34.77 1.6677278164 38.0589947733 31.4810052267
BXD55 m 30.858 1.6677278164 34.1469947733 27.5690052267
BXD56 m 33.71 1.8645763828 37.3872079454 30.0327920546
BXD6 m 34.184 1.6677278164 37.4729947733 30.8950052267
BXD60 m 40.432 1.6677278164 43.7209947733 37.1430052267
BXD61 m 33.4366666667 2.153027353 37.6827406609 29.1905926724
BXD62 m 32.0025 1.8645763828 35.6797079454 28.3252920546
BXD63 m 37.425 1.8645763828 41.1022079454 33.7477920546
BXD64 m 34.71 1.8645763828 38.3872079454 31.0327920546
BXD65 m 44.685 1.8645763828 48.3622079454 41.0077920546
BXD65a m 44.704 1.6677278164 47.9929947733 41.4150052267
BXD65b m 46.5925 1.8645763828 50.2697079454 42.9152920546
BXD66 m 44.81 1.6677278164 48.0989947733 41.5210052267
BXD67 m 39.142 1.6677278164 42.4309947733 35.8530052267
BXD68 m 40.9066666667 2.153027353 45.1527406609 36.6605926724
BXD69 m 40.614 1.6677278164 43.9029947733 37.3250052267
BXD70 m 31.5 1.8645763828 35.1772079454 27.8227920546
BXD71 m 39.418 1.6677278164 42.7069947733 36.1290052267
BXD73 m 33.445 1.8645763828 37.1222079454 29.7677920546
BXD73a m 44.658 1.6677278164 47.9469947733 41.3690052267
BXD73b m 42.542 1.6677278164 45.8309947733 39.2530052267
BXD75 m 38.684 1.6677278164 41.9729947733 35.3950052267
BXD77 m 33.786 1.6677278164 37.0749947733 30.4970052267
BXD79 m 37.262 1.6677278164 40.5509947733 33.9730052267
BXD8 m 28.385 1.8645763828 32.0622079454 24.7077920546
BXD81 m 28.345 1.8645763828 32.0222079454 24.6677920546
BXD83 m 28.6 2.153027353 32.8460739943 24.3539260057
BXD84 m 37.0575 1.8645763828 40.7347079454 33.3802920546
BXD85 m 47.268 1.6677278164 50.5569947733 43.9790052267
BXD87 m 26.918 1.6677278164 30.2069947733 23.6290052267
BXD89 m 36.25 1.8645763828 39.9272079454 32.5727920546
BXD90 m 30.77 1.8645763828 34.4472079454 27.0927920546
BXD95 m 35.3175 1.8645763828 38.9947079454 31.6402920546
BXD98 m 35.6 1.8645763828 39.2772079454 31.9227920546
BXD99 m 40.116 1.6677278164 43.4049947733 36.8270052267
C57BL/6J m 31.446 1.6677278164 34.7349947733 28.1570052267
DBA/2J m 33.8725 1.8645763828 37.5497079454 30.1952920546




  GWAS USING LINEAR MIXED MODELS