Project measure / variable:   Auwerx1   bw_coldtest_HFD

ID, description, units MPD:111281   bw_coldtest_HFD   body weight prior to cold response test, 21 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 21wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight prior to cold response test, 21 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means47.114   g
Median of the strain means47.909   g
SD of the strain means± 7.1551
Coefficient of variation (CV)0.1519
Min–max range of strain means29.562   –   61.44   g
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 13510.8015 245.6509 16.1581 < 0.0001
Residuals 198 3010.1851 15.203


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 39.2 3.7174   5 1.6625 0.0948 33.27, 43.1 -1.11
BXD100 m 52.88 5.0397   5 2.2538 0.0953 47.8, 58.93 0.81
BXD101 m 49.312 1.5993   4 0.79966 0.0324 47.16, 50.81 0.31
BXD11 m 50.32 4.9178   5 2.1993 0.0977 42.25, 53.67 0.45
BXD12 m 29.562 1.91   5 0.85416 0.0646 27.39, 31.72 -2.45
BXD16 m 58.85 3.2217   5 1.4408 0.0547 54.39, 62.67 1.64
BXD2 m 45.404 5.5446   5 2.4796 0.1221 36.36, 50.4 -0.24
BXD27 m 50.49 1.337   4 0.66852 0.0265 49.56, 52.43 0.47
BXD32 m 48.477 5.8416   3 3.3726 0.1205 43.46, 54.89 0.19
BXD34 m 38.872 7.1424   5 3.1942 0.1837 30.72, 47.57 -1.15
BXD39 m 47.174 1.1742   5 0.52511 0.0249 45.75, 48.81 0.01
BXD40 m 30.68 2.735   4 1.3675 0.0891 28.08, 34.48 -2.3
BXD43 m 43.54 3.8827   3 2.2417 0.0892 39.33, 46.98 -0.5
BXD44 m 61.44 3.9719   9 1.324 0.0646 55.49, 69.21 2.0
BXD45 m 43.016 3.0966   5 1.3848 0.072 38.19, 46.59 -0.57
BXD48 m 54.56 5.3198   5 2.3791 0.0975 46.98, 59.8 1.04
BXD48a m 60.64 5.2989   3 3.0593 0.0874 57.36, 66.75 1.89
BXD49 m 50.13 7.84   5 3.5062 0.1564 39.73, 59.12 0.42
BXD50 m 47.5 3.702   5 1.6556 0.0779 42.35, 51.12 0.05
BXD51 m 59.35 4.8708   4 2.4354 0.0821 53.94, 64.32 1.71
BXD53 m 48.64 2.4584   5 1.0994 0.0505 45.07, 50.8 0.21
BXD55 m 39.177 0.73889   4 0.36944 0.0189 38.5, 40.23 -1.11
BXD56 m 41.333 0.88149   3 0.50893 0.0213 40.52, 42.27 -0.81
BXD6 m 45.466 2.6046   5 1.1648 0.0573 41.72, 49.06 -0.23
BXD60 m 60.74 2.3298   5 1.0419 0.0384 57.9, 63.36 1.9
BXD61 m 53.04 1.0042   5 0.44908 0.0189 51.39, 53.9 0.83
BXD62 m 43.907 1.7469   4 0.87346 0.0398 41.34, 45.23 -0.45
BXD63 m 48.315 0.2192   2   0.155 0.0045 48.16, 48.47 0.17
BXD64 m 47.617 5.0349   4 2.5174 0.1057 41.25, 53.48 0.07
BXD65 m 56.59 2.3678   4 1.1839 0.0418 53.83, 59.59 1.32
BXD65a m 51.54 3.468   4 1.734 0.0673 48.45, 56.51 0.62
BXD66 m 53.5 5.7698   5 2.5803 0.1078 43.28, 57.05 0.89
BXD67 m 49.534 3.4472   5 1.5416 0.0696 43.59, 52.19 0.34
BXD68 m 40.552 4.2736   4 2.1368 0.1054 35.67, 45.79 -0.92
BXD69 m 40.384 1.5871   5 0.70975 0.0393 38.68, 42.66 -0.94
BXD70 m 46.175 3.2337   4 1.6169 0.07 42.57, 49.85 -0.13
BXD71 m 50.08 5.5633   4 2.7816 0.1111 43.93, 57.12 0.41
BXD73 m 42.176 4.333   5 1.9378 0.1027 35.22, 45.65 -0.69
BXD73a m 46.198 1.3565   5 0.60663 0.0294 44.36, 48.01 -0.13
BXD73b m 49.75 2.2738   5 1.0169 0.0457 47.27, 52.49 0.37
BXD75 m 45.224 1.9187   5 0.85807 0.0424 42.87, 47.06 -0.26
BXD77 m 45.232 4.6138   5 2.0634 0.102 40.2, 50.21 -0.26
BXD79 m 46.29 3.2577   5 1.4569 0.0704 40.71, 48.36 -0.12
BXD8 m 34.776 4.7941   5 2.144 0.1379 28.4, 40.49 -1.72
BXD81 m 48.2 2.3979   4 1.1989 0.0497 46.11, 51.15 0.15
BXD83 m 36.538 3.4262   4 1.7131 0.0938 31.52, 38.96 -1.48
BXD84 m 50.92 5.4123   3 3.1248 0.1063 47.41, 57.15 0.53
BXD85 m 53.26 2.262   4 1.131 0.0425 51.01, 55.54 0.86
BXD87 m 33.496 2.1783   5 0.97414 0.065 30.69, 36.71 -1.9
BXD89 m 39.733 2.1509   4 1.0754 0.0541 36.87, 41.89 -1.03
BXD90 m 50.41 3.4946   4 1.7473 0.0693 45.23, 52.71 0.46
BXD95 m 51.89 5.6097   5 2.5087 0.1081 42.5, 57.29 0.67
BXD98 m 50.45 2.5401   5 1.1359 0.0503 46.77, 53.24 0.47
BXD99 m 49.746 3.9824   5 1.781 0.0801 46.12, 55.58 0.37
C57BL/6J m 42.026 5.655   5 2.529 0.1346 33.53, 48.13 -0.71
DBA/2J m 44.07 3.9923   5 1.7854 0.0906 39.72, 48.27 -0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 39.2 1.7437290491 42.6386641614 35.7613358386
BXD100 m 52.884 1.7437290491 56.3226641614 49.4453358386
BXD101 m 49.3125 1.9495483441 53.1570434084 45.4679565916
BXD11 m 50.322 1.7437290491 53.7606641614 46.8833358386
BXD12 m 29.562 1.7437290491 33.0006641614 26.1233358386
BXD16 m 58.854 1.7437290491 62.2926641614 55.4153358386
BXD2 m 45.404 1.7437290491 48.8426641614 41.9653358386
BXD27 m 50.49 1.9495483441 54.3345434084 46.6454565916
BXD32 m 48.4766666667 2.2511445225 52.9159630101 44.0373703232
BXD34 m 38.872 1.7437290491 42.3106641614 35.4333358386
BXD39 m 47.174 1.7437290491 50.6126641614 43.7353358386
BXD40 m 30.68 1.9495483441 34.5245434084 26.8354565916
BXD43 m 43.54 2.2511445225 47.9792963434 39.1007036566
BXD44 m 61.4433333333 1.299698896 64.0063622722 58.8803043944
BXD45 m 43.016 1.7437290491 46.4546641614 39.5773358386
BXD48 m 54.556 1.7437290491 57.9946641614 51.1173358386
BXD48a m 60.6366666667 2.2511445225 65.0759630101 56.1973703232
BXD49 m 50.128 1.7437290491 53.5666641614 46.6893358386
BXD50 m 47.5 1.7437290491 50.9386641614 44.0613358386
BXD51 m 59.3475 1.9495483441 63.1920434084 55.5029565916
BXD53 m 48.64 1.7437290491 52.0786641614 45.2013358386
BXD55 m 39.1775 1.9495483441 43.0220434084 35.3329565916
BXD56 m 41.3333333333 2.2511445225 45.7726296768 36.8940369899
BXD6 m 45.466 1.7437290491 48.9046641614 42.0273358386
BXD60 m 60.744 1.7437290491 64.1826641614 57.3053358386
BXD61 m 53.044 1.7437290491 56.4826641614 49.6053358386
BXD62 m 43.9075 1.9495483441 47.7520434084 40.0629565916
BXD63 m 48.315 2.7570777087 53.7520054292 42.8779945708
BXD64 m 47.6175 1.9495483441 51.4620434084 43.7729565916
BXD65 m 56.585 1.9495483441 60.4295434084 52.7404565916
BXD65a m 51.5425 1.9495483441 55.3870434084 47.6979565916
BXD66 m 53.502 1.7437290491 56.9406641614 50.0633358386
BXD67 m 49.534 1.7437290491 52.9726641614 46.0953358386
BXD68 m 40.5525 1.9495483441 44.3970434084 36.7079565916
BXD69 m 40.384 1.7437290491 43.8226641614 36.9453358386
BXD70 m 46.175 1.9495483441 50.0195434084 42.3304565916
BXD71 m 50.085 1.9495483441 53.9295434084 46.2404565916
BXD73 m 42.176 1.7437290491 45.6146641614 38.7373358386
BXD73a m 46.198 1.7437290491 49.6366641614 42.7593358386
BXD73b m 49.75 1.7437290491 53.1886641614 46.3113358386
BXD75 m 45.224 1.7437290491 48.6626641614 41.7853358386
BXD77 m 45.232 1.7437290491 48.6706641614 41.7933358386
BXD79 m 46.29 1.7437290491 49.7286641614 42.8513358386
BXD8 m 34.776 1.7437290491 38.2146641614 31.3373358386
BXD81 m 48.2 1.9495483441 52.0445434084 44.3554565916
BXD83 m 36.5375 1.9495483441 40.3820434084 32.6929565916
BXD84 m 50.9166666667 2.2511445225 55.3559630101 46.4773703232
BXD85 m 53.26 1.9495483441 57.1045434084 49.4154565916
BXD87 m 33.496 1.7437290491 36.9346641614 30.0573358386
BXD89 m 39.7325 1.9495483441 43.5770434084 35.8879565916
BXD90 m 50.4075 1.9495483441 54.2520434084 46.5629565916
BXD95 m 51.89 1.7437290491 55.3286641614 48.4513358386
BXD98 m 50.454 1.7437290491 53.8926641614 47.0153358386
BXD99 m 49.746 1.7437290491 53.1846641614 46.3073358386
C57BL/6J m 42.026 1.7437290491 45.4646641614 38.5873358386
DBA/2J m 44.07 1.7437290491 47.5086641614 40.6313358386




  GWAS USING LINEAR MIXED MODELS