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Project measure / variable:   Auwerx1   food_intake_16wks_HFD

ID, description, units MPD:111233   food_intake_16wks_HFD   food_intake_16wks   [g/day]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   41 strains     sex: m     age: 16wks
Procedure intake monitoring
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  STRAIN COMPARISON PLOT
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Auwerx1 - food_intake_16wks HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested41 strains
Mean of the strain means1.9572   g/day
Median of the strain means1.925   g/day
SD of the strain means± 0.49944
Coefficient of variation (CV)0.2552
Min–max range of strain means1.08   –   4.005   g/day
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 39 41.4765 1.0635 2.1486 0.0007
Residuals 133 65.8302 0.495


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD100 m 2.288 0.48587   5 0.21729 0.2124 1.86, 3.05 0.66
BXD101 m 1.305 0.50322   4 0.25161 0.3856 0.88, 2.03 -1.31
BXD11 m 1.989 0.63578   5 0.28433 0.3196 1.165, 2.915 0.06
BXD12 m 1.925 0.69185   5 0.3094 0.3594 1.145, 2.685 -0.06
BXD16 m 2.166 0.43993   5 0.19674 0.2031 1.515, 2.585 0.42
BXD2 m 1.607 0.71715   5 0.32072 0.4463 0.925, 2.705 -0.7
BXD27 m 1.9625 0.19956   4 0.09978 0.1017 1.77, 2.24 0.01
BXD34 m 2.243 0.52268   5 0.23375 0.233 1.49, 2.62 0.57
BXD39 m 1.612 0.2269   5 0.10147 0.1408 1.38, 1.94 -0.69
BXD43 m 2.2033 0.53501   3 0.30889 0.2428 1.67, 2.74 0.49
BXD45 m 1.49 0.14855   4 0.07427 0.0997 1.28, 1.63 -0.94
BXD48a m 1.235 0.20008   4 0.10004 0.162 0.97, 1.44 -1.45
BXD51 m 1.6625 0.66685   4 0.33343 0.4011 1.2, 2.65 -0.59
BXD53 m 2.183 0.42662   5 0.19079 0.1954 1.445, 2.51 0.45
BXD56 m 1.75 0.15588   3 0.09 0.0891 1.57, 1.84 -0.41
BXD6 m 2.162 0.6563   5 0.29351 0.3036 1.085, 2.82 0.41
BXD61 m 2.438 0.26781   5 0.11977 0.1098 2.0, 2.72 0.96
BXD62 m 1.6225 0.36161   4 0.1808 0.2229 1.25, 2.1 -0.67
BXD63 m 2.3975 0.59466   4 0.29733 0.248 1.74, 3.18 0.88
BXD64 m 1.8925 0.96248   4 0.48124 0.5086 0.56, 2.82 -0.13
BXD65 m 2.29 0.29269   4 0.14634 0.1278 1.96, 2.65 0.67
BXD65a m 2.285 0.32378   4 0.16189 0.1417 1.89, 2.68 0.66
BXD66 m 2.392 0.97963   5 0.4381 0.4095 1.67, 4.07 0.87
BXD67 m 1.7 0.30887   5 0.13813 0.1817 1.3, 2.02 -0.51
BXD69 m 1.71 0.42622   4 0.21311 0.2493 1.29, 2.13 -0.49
BXD70 m 2.5 0.75881   4 0.37941 0.3035 1.38, 3.03 1.09
BXD71 m 1.8225 0.195   4 0.0975 0.107 1.66, 2.1 -0.27
BXD73 m 1.172 0.82968   5 0.37104 0.7079 0.42, 2.41 -1.57
BXD73b m 1.79 0.0   1   0.0 0.0 1.79, 1.79 -0.33
BXD75 m 1.08 0.03559   4 0.0178 0.033 1.04, 1.11 -1.76
BXD79 m 2.17 0.15524   5 0.06943 0.0715 2.0, 2.32 0.43
BXD8 m 1.524 0.24641   5 0.1102 0.1617 1.17, 1.785 -0.87
BXD81 m 2.075 0.33789   4 0.16894 0.1628 1.61, 2.33 0.24
BXD83 m 1.545 0.50083   4 0.25042 0.3242 0.88, 2.06 -0.83
BXD84 m 2.3933 0.15822   3 0.09135 0.0661 2.22, 2.53 0.87
BXD87 m 4.005 3.327   4 1.6635 0.8307 1.64, 8.91 4.1
BXD89 m 2.1275 0.18715   4 0.09357 0.088 2.0, 2.4 0.34
BXD95 m 1.506 0.52161   5 0.23327 0.3464 0.9, 2.12 -0.9
BXD98 m 1.766 0.3774   5 0.16878 0.2137 1.17, 2.22 -0.38
C57BL/6J m 1.885 0.30838   4 0.15419 0.1636 1.43, 2.09 -0.14
DBA/2J m 2.3733 0.5288   3 0.3053 0.2228 2.01, 2.98 0.83


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 m 2.288 0.3146311721 2.9103282708 1.6656717292
BXD101 m 1.305 0.3517683443 2.000784159 0.609215841
BXD11 m 1.989 0.3146311721 2.6113282708 1.3666717292
BXD12 m 1.925 0.3146311721 2.5473282708 1.3026717292
BXD16 m 2.166 0.3146311721 2.7883282708 1.5436717292
BXD2 m 1.607 0.3146311721 2.2293282708 0.9846717292
BXD27 m 1.9625 0.3517683443 2.658284159 1.266715841
BXD34 m 2.243 0.3146311721 2.8653282708 1.6206717292
BXD39 m 1.612 0.3146311721 2.2343282708 0.9896717292
BXD43 m 2.2033333333 0.4061870965 3.0067556763 1.3999109904
BXD45 m 1.49 0.3517683443 2.185784159 0.794215841
BXD48a m 1.235 0.3517683443 1.930784159 0.539215841
BXD51 m 1.6625 0.3517683443 2.358284159 0.966715841
BXD53 m 2.183 0.3146311721 2.8053282708 1.5606717292
BXD56 m 1.75 0.4061870965 2.553422343 0.946577657
BXD6 m 2.162 0.3146311721 2.7843282708 1.5396717292
BXD61 m 2.438 0.3146311721 3.0603282708 1.8156717292
BXD62 m 1.6225 0.3517683443 2.318284159 0.926715841
BXD63 m 2.3975 0.3517683443 3.093284159 1.701715841
BXD64 m 1.8925 0.3517683443 2.588284159 1.196715841
BXD65 m 2.29 0.3517683443 2.985784159 1.594215841
BXD65a m 2.285 0.3517683443 2.980784159 1.589215841
BXD66 m 2.392 0.3146311721 3.0143282708 1.7696717292
BXD67 m 1.7 0.3146311721 2.3223282708 1.0776717292
BXD69 m 1.71 0.3517683443 2.405784159 1.014215841
BXD70 m 2.5 0.3517683443 3.195784159 1.804215841
BXD71 m 1.8225 0.3517683443 2.518284159 1.126715841
BXD73 m 1.172 0.3146311721 1.7943282708 0.5496717292
BXD75 m 1.08 0.3517683443 1.775784159 0.384215841
BXD79 m 2.17 0.3146311721 2.7923282708 1.5476717292
BXD8 m 1.524 0.3146311721 2.1463282708 0.9016717292
BXD81 m 2.075 0.3517683443 2.770784159 1.379215841
BXD83 m 1.545 0.3517683443 2.240784159 0.849215841
BXD84 m 2.3933333333 0.4061870965 3.1967556763 1.5899109904
BXD87 m 4.005 0.3517683443 4.700784159 3.309215841
BXD89 m 2.1275 0.3517683443 2.823284159 1.431715841
BXD95 m 1.506 0.3146311721 2.1283282708 0.8836717292
BXD98 m 1.766 0.3146311721 2.3883282708 1.1436717292
C57BL/6J m 1.885 0.3517683443 2.580784159 1.189215841
DBA/2J m 2.3733333333 0.4061870965 3.1767556763 1.5699109904




  GWAS USING LINEAR MIXED MODELS