Project measure / variable:   CSNA03   antici_resp_right_cc_acq_JAX

ID, description, units MPD:110511   antici_resp_right_cc_acq_JAX   total number of anticipatory responses in right flanking hole without prior successful nose poke in central hole (reversal learning assay), CC   [n]  acquisition  
Data set, strains CSNA03   CC w/par   51 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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  STRAIN COMPARISON PLOT
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CSNA03 - total number of anticipatory responses in right flanking hole without prior successful nose poke in central hole (reversal learning assay), CC acquisition

PWK/PhJCC015/UncJCC061/GeniUncJCC059/TauUncJCC013/GeniUncJCC023/GeniUncJA/JCC004/TauUncJCC028/GeniUncJCC036/UncJCC084/TauJCC011/UncJCC043/GeniUncJCC074/UncJCC025/GeniUncJCC029/UncJCC035/UncJCC018/UncJCC033/GeniUncJCC041/TauUncJCAST/EiJNOD/ShiLtJCC079/TauUncJCC005/TauUncJCC012/GeniUncJCC057/UncJCC032/GeniUncJCC026/GeniUncJWSB/EiJCC051/TauUncJ129S1/SvImJC57BL/6JCC019/TauUncJCC006/TauUncJCC060/UncJCC001/UncJCC078/TauUncJCC003/UncJCC027/GeniUncJNZO/HlLtJCC080/TauUncJCC016/GeniUncJCC040/TauUncJCC037/TauUncJCC009/UncJCC030/GeniUncJCC002/UncJCC007/UncJCC017/UncJCC075/UncJCC008/GeniUncJ n 01,0002,0003,0004,0005,0006,0007,0008,0009,00010,00011,000femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested50 strains48 strains
Mean of the strain means81.84   n 87.64   n
Median of the strain means53.0   n 38.25   n
SD of the strain means± 94.55 ± 233.2
Coefficient of variation (CV)1.1553 2.6614
Min–max range of strain means2.0   –   509.0   n 1.0   –   1629.0   n
Mean sample size per strain3.0   mice 2.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 225795.3519 225795.3519 0.3862 0.5351
strain 33 8019581.0374 243017.6072 0.4156 0.9981
sex:strain 33 9284716.9849 281355.0601 0.4812 0.9926
Residuals 181 105832558.5134 584710.268


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 98 (98)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 53.67 57.42   3 33.153 1.07 5.0, 117.0 -0.3
129S1/SvImJ m 37.25 50.06   4 25.028 1.3438 1.0, 111.0 -0.22
A/J f 210.3 207.7   6 84.78 0.9874 7.0, 614.0 1.36
A/J m 144.6 95.25   5 42.596 0.6587 46.0, 289.0 0.24
C57BL/6J f 73.15 57.29   13 15.889 0.7831 7.0, 208.0 -0.09
C57BL/6J m 15.727 14.276   11 4.3045 0.9078 2.0, 51.0 -0.31
CAST/EiJ f 53.0 47.749   10 15.1 0.9009 2.0, 127.0 -0.3
CAST/EiJ m 77.86 65.04   7 24.583 0.8354 13.0, 160.0 -0.04
CC001/UncJ f 17.667 9.0738   3 5.2387 0.5136 11.0, 28.0 -0.68
CC001/UncJ m 41.0 11.314   2   8.0 0.2759 33.0, 49.0 -0.2
CC002/UncJ f 9.6667 9.2916   3 5.3645 0.9612 2.0, 20.0 -0.76
CC002/UncJ m 13.25 16.029   4 8.0143 1.2097 2.0, 36.0 -0.32
CC003/UncJ f 28.5 24.749   2   17.5 0.8684 11.0, 46.0 -0.56
CC003/UncJ m 24.0 14.0   3 8.0829 0.5833 10.0, 38.0 -0.27
CC004/TauUncJ f 182.0 0.0   1   0.0 0.0 182.0, 182.0 1.06
CC004/TauUncJ m 71.0 82.02   2   58.0 1.1553 13.0, 129.0 -0.07
CC005/TauUncJ f 106.3 92.22   3 53.24 0.8673 4.0, 183.0 0.26
CC005/TauUncJ m 7.0 4.2426   2   3.0 0.6061 4.0, 10.0 -0.35
CC006/TauUncJ f 35.5 28.991   2   20.5 0.8167 15.0, 56.0 -0.49
CC006/TauUncJ m 38.0 52.33   2   37.0 1.377 1.0, 75.0 -0.21
CC007/UncJ f 10.0 0.0   1   0.0 0.0 10.0, 10.0 -0.76
CC008/GeniUncJ f 2.0 0.0   1   0.0 0.0 2.0, 2.0 -0.84
CC008/GeniUncJ m 5.0 0.0   1   0.0 0.0 5.0, 5.0 -0.35
CC009/UncJ f 24.0 25.456   2   18.0 1.0607 6.0, 42.0 -0.61
CC009/UncJ m 3.5 3.5355   2   2.5 1.0102 1.0, 6.0 -0.36
CC011/UncJ f 140.3 56.0   3 32.333 0.3991 108.0, 205.0 0.62
CC011/UncJ m 36.0 7.0711   2   5.0 0.1964 31.0, 41.0 -0.22
CC012/GeniUncJ f 33.667 47.12   3 27.205 1.3996 4.0, 88.0 -0.51
CC012/GeniUncJ m 74.0 0.0   1   0.0 0.0 74.0, 74.0 -0.06
CC013/GeniUncJ f 231.5 193.0   2   136.5 0.8339 95.0, 368.0 1.58
CC013/GeniUncJ m 176.5 130.8   2   92.5 0.7412 84.0, 269.0 0.38
CC015/UncJ f 509.0 0.0   1   0.0 0.0 509.0, 509.0 4.52
CC015/UncJ m 8.0 0.0   1   0.0 0.0 8.0, 8.0 -0.34
CC016/GeniUncJ f 19.333 15.695   3 9.0615 0.8118 7.0, 37.0 -0.66
CC016/GeniUncJ m 13.75 19.704   4 9.852 1.433 2.0, 43.0 -0.32
CC017/UncJ f 5.5 4.9497   2   3.5 0.9 2.0, 9.0 -0.81
CC017/UncJ m 3.6667 2.3094   3 1.3333 0.6298 1.0, 5.0 -0.36
CC018/UncJ f 140.5 170.4   2   120.5 1.2129 20.0, 261.0 0.62
CC018/UncJ m 13.5 17.678   2   12.5 1.3095 1.0, 26.0 -0.32
CC019/TauUncJ f 57.0 40.258   4 20.129 0.7063 3.0, 96.0 -0.26
CC019/TauUncJ m 20.5 19.774   4 9.8869 0.9646 3.0, 45.0 -0.29
CC023/GeniUncJ f 126.0 171.1   2   121.0 1.3581 5.0, 247.0 0.47
CC023/GeniUncJ m 259.0 0.0   1   0.0 0.0 259.0, 259.0 0.73
CC025/GeniUncJ f 127.7 53.3   3 30.775 0.4175 67.0, 167.0 0.49
CC025/GeniUncJ m 36.333 29.006   3 16.746 0.7983 7.0, 65.0 -0.22
CC026/GeniUncJ f 4.0 0.0   1   0.0 0.0 4.0, 4.0 -0.82
CC026/GeniUncJ m 100.0 132.9   2   94.0 1.3294 6.0, 194.0 0.05
CC027/GeniUncJ f 8.0 2.8284   2   2.0 0.3536 6.0, 10.0 -0.78
CC027/GeniUncJ m 38.5 23.868   4 11.934 0.6199 13.0, 67.0 -0.21
CC028/GeniUncJ f 146.7 148.7   3 85.83 1.0136 43.0, 317.0 0.69
CC028/GeniUncJ m 61.0 51.86   3 29.939 0.8501 6.0, 109.0 -0.11
CC029/UncJ f 111.0 0.0   1   0.0 0.0 111.0, 111.0 0.31
CC029/UncJ m 52.0 0.0   1   0.0 0.0 52.0, 52.0 -0.15
CC030/GeniUncJ f 11.5 6.364   2   4.5 0.5534 7.0, 16.0 -0.74
CC030/GeniUncJ m 11.5 7.7782   2   5.5 0.6764 6.0, 17.0 -0.33
CC032/GeniUncJ f 53.0 72.12   2   51.0 1.3608 2.0, 104.0 -0.3
CC033/GeniUncJ f 90.5 67.18   2   47.5 0.7423 43.0, 138.0 0.09
CC033/GeniUncJ m 47.0 31.113   2   22.0 0.662 25.0, 69.0 -0.17
CC035/UncJ m 78.0 0.0   1   0.0 0.0 78.0, 78.0 -0.04
CC036/UncJ f 95.67 60.01   3 34.647 0.6273 43.0, 161.0 0.15
CC036/UncJ m 102.7 85.68   3 49.465 0.8345 10.0, 179.0 0.06
CC037/TauUncJ f 22.0 24.042   2   17.0 1.0928 5.0, 39.0 -0.63
CC037/TauUncJ m 9.6667 14.154   3 8.1718 1.4642 1.0, 26.0 -0.33
CC040/TauUncJ f 6.0 3.4641   3 2.0 0.5774 4.0, 10.0 -0.8
CC040/TauUncJ m 27.0 25.456   2   18.0 0.9428 9.0, 45.0 -0.26
CC041/TauUncJ f 70.67 79.66   3 45.99 1.1272 2.0, 158.0 -0.12
CC041/TauUncJ m 65.0 73.54   2   52.0 1.1314 13.0, 117.0 -0.1
CC043/GeniUncJ f 19.5 2.1213   2   1.5 0.1088 18.0, 21.0 -0.66
CC043/GeniUncJ m 153.0 199.4   2   141.0 1.3033 12.0, 294.0 0.28
CC051/TauUncJ f 40.0 0.0   1   0.0 0.0 40.0, 40.0 -0.44
CC051/TauUncJ m 57.0 0.0   1   0.0 0.0 57.0, 57.0 -0.13
CC057/UncJ f 41.0 0.0   1   0.0 0.0 41.0, 41.0 -0.43
CC057/UncJ m 65.0 42.426   2   30.0 0.6527 35.0, 95.0 -0.1
CC059/TauUncJ f 263.5 347.1   4 173.6 1.3173 79.0, 784.0 1.92
CC059/TauUncJ m 147.6 163.2   5 73.0 1.106 16.0, 430.0 0.26
CC060/UncJ f 11.0 0.0   1   0.0 0.0 11.0, 11.0 -0.75
CC060/UncJ m 50.0 0.0   1   0.0 0.0 50.0, 50.0 -0.16
CC061/GeniUncJ f 313.3 290.8   3 167.9 0.9281 15.0, 596.0 2.45
CC061/GeniUncJ m 111.5 70.0   2   49.5 0.6278 62.0, 161.0 0.1
CC074/UncJ f 143.0 0.0   1   0.0 0.0 143.0, 143.0 0.65
CC074/UncJ m 25.0 0.0   1   0.0 0.0 25.0, 25.0 -0.27
CC075/UncJ f 8.0 0.0   1   0.0 0.0 8.0, 8.0 -0.78
CC075/UncJ m 1.0 0.0   1   0.0 0.0 1.0, 1.0 -0.37
CC078/TauUncJ f 40.333 38.188   3 22.048 0.9468 7.0, 82.0 -0.44
CC078/TauUncJ m 18.0 25.239   3 14.572 1.4022 1.0, 47.0 -0.3
CC079/TauUncJ f 88.0 0.0   1   0.0 0.0 88.0, 88.0 0.07
CC079/TauUncJ m 29.0 16.971   2   12.0 0.5852 17.0, 41.0 -0.25
CC080/TauUncJ f 17.0 12.728   2   9.0 0.7487 8.0, 26.0 -0.69
CC084/TauJ f 84.0 111.7   2   79.0 1.33 5.0, 163.0 0.02
CC084/TauJ m 102.0 127.3   2   90.0 1.2478 12.0, 192.0 0.06
NOD/ShiLtJ f 55.25 51.62   8 18.249 0.9342 3.0, 149.0 -0.28
NOD/ShiLtJ m 69.4 93.52   10 29.573 1.3475 3.0, 297.0 -0.08
NZO/HlLtJ f 23.0 30.512   3 17.616 1.3266 2.0, 58.0 -0.62
NZO/HlLtJ m 17.5 0.70711   2   0.5 0.0404 17.0, 18.0 -0.3
PWK/PhJ f 46.875 90.77   8 32.093 1.9365 2.0, 270.0 -0.37
PWK/PhJ m 1629.0 4170.0   7 1576.0 2.5593 3.0, 11084.0 6.61
WSB/EiJ f 82.75 99.48   8 35.171 1.2022 38.0, 328.0 0.01
WSB/EiJ m 20.0 20.12   6 8.2138 1.006 4.0, 50.0 -0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 53.6666666667 441.4786774881 924.7734281154 -817.4400947821
129S1/SvImJ m 37.25 382.3317499338 791.650584823 -717.150584823
A/J f 210.3333333333 312.1725666011 826.2988314912 -405.6321648245
A/J m 144.6 341.9679131234 819.3563959719 -530.1563959719
C57BL/6J f 73.1538461538 212.0794967114 491.6199985876 -345.3123062799
C57BL/6J m 15.7272727273 230.5547199946 470.6479420877 -439.1933966332
CAST/EiJ f 53.0 241.8078303178 530.1248232407 -424.1248232407
CAST/EiJ m 77.8571428571 289.0156367569 648.1303818181 -492.4160961038
CC001/UncJ f 17.6666666667 441.4786774881 888.7734281154 -853.4400947821
CC001/UncJ m 41.0 540.6987460823 1107.8835385189 -1025.8835385189
CC002/UncJ f 9.6666666667 441.4786774881 880.7734281154 -861.4400947821
CC002/UncJ m 13.25 382.3317499338 767.650584823 -741.150584823
CC003/UncJ f 28.5 540.6987460823 1095.3835385189 -1038.3835385189
CC003/UncJ m 24.0 441.4786774881 895.1067614487 -847.1067614487
CC005/TauUncJ f 106.3333333333 441.4786774881 977.4400947821 -764.7734281154
CC005/TauUncJ m 7.0 540.6987460823 1073.8835385189 -1059.8835385189
CC006/TauUncJ f 35.5 540.6987460823 1102.3835385189 -1031.3835385189
CC006/TauUncJ m 38.0 540.6987460823 1104.8835385189 -1028.8835385189
CC009/UncJ f 24.0 540.6987460823 1090.8835385189 -1042.8835385189
CC009/UncJ m 3.5 540.6987460823 1070.3835385189 -1063.3835385189
CC011/UncJ f 140.3333333333 441.4786774881 1011.4400947821 -730.7734281154
CC011/UncJ m 36.0 540.6987460823 1102.8835385189 -1030.8835385189
CC013/GeniUncJ f 231.5 540.6987460823 1298.3835385189 -835.3835385189
CC013/GeniUncJ m 176.5 540.6987460823 1243.3835385189 -890.3835385189
CC016/GeniUncJ f 19.3333333333 441.4786774881 890.4400947821 -851.7734281154
CC016/GeniUncJ m 13.75 382.3317499338 768.150584823 -740.650584823
CC017/UncJ f 5.5 540.6987460823 1072.3835385189 -1061.3835385189
CC017/UncJ m 3.6666666667 441.4786774881 874.7734281154 -867.4400947821
CC018/UncJ f 140.5 540.6987460823 1207.3835385189 -926.3835385189
CC018/UncJ m 13.5 540.6987460823 1080.3835385189 -1053.3835385189
CC019/TauUncJ f 57.0 382.3317499338 811.400584823 -697.400584823
CC019/TauUncJ m 20.5 382.3317499338 774.900584823 -733.900584823
CC025/GeniUncJ f 127.6666666667 441.4786774881 998.7734281154 -743.4400947821
CC025/GeniUncJ m 36.3333333333 441.4786774881 907.4400947821 -834.7734281154
CC027/GeniUncJ f 8.0 540.6987460823 1074.8835385189 -1058.8835385189
CC027/GeniUncJ m 38.5 382.3317499338 792.900584823 -715.900584823
CC028/GeniUncJ f 146.6666666667 441.4786774881 1017.7734281154 -724.4400947821
CC028/GeniUncJ m 61.0 441.4786774881 932.1067614487 -810.1067614487
CC030/GeniUncJ f 11.5 540.6987460823 1078.3835385189 -1055.3835385189
CC030/GeniUncJ m 11.5 540.6987460823 1078.3835385189 -1055.3835385189
CC033/GeniUncJ f 90.5 540.6987460823 1157.3835385189 -976.3835385189
CC033/GeniUncJ m 47.0 540.6987460823 1113.8835385189 -1019.8835385189
CC036/UncJ f 95.6666666667 441.4786774881 966.7734281154 -775.4400947821
CC036/UncJ m 102.6666666667 441.4786774881 973.7734281154 -768.4400947821
CC037/TauUncJ f 22.0 540.6987460823 1088.8835385189 -1044.8835385189
CC037/TauUncJ m 9.6666666667 441.4786774881 880.7734281154 -861.4400947821
CC040/TauUncJ f 6.0 441.4786774881 877.1067614487 -865.1067614487
CC040/TauUncJ m 27.0 540.6987460823 1093.8835385189 -1039.8835385189
CC041/TauUncJ f 70.6666666667 441.4786774881 941.7734281154 -800.4400947821
CC041/TauUncJ m 65.0 540.6987460823 1131.8835385189 -1001.8835385189
CC043/GeniUncJ f 19.5 540.6987460823 1086.3835385189 -1047.3835385189
CC043/GeniUncJ m 153.0 540.6987460823 1219.8835385189 -913.8835385189
CC059/TauUncJ f 263.5 382.3317499338 1017.900584823 -490.900584823
CC059/TauUncJ m 147.6 341.9679131234 822.3563959719 -527.1563959719
CC061/GeniUncJ f 313.3333333333 441.4786774881 1184.4400947821 -557.7734281154
CC061/GeniUncJ m 111.5 540.6987460823 1178.3835385189 -955.3835385189
CC078/TauUncJ f 40.3333333333 441.4786774881 911.4400947821 -830.7734281154
CC078/TauUncJ m 18.0 441.4786774881 889.1067614487 -853.1067614487
CC084/TauJ f 84.0 540.6987460823 1150.8835385189 -982.8835385189
CC084/TauJ m 102.0 540.6987460823 1168.8835385189 -964.8835385189
NOD/ShiLtJ f 55.25 270.3493730411 588.6917692594 -478.1917692594
NOD/ShiLtJ m 69.4 241.8078303178 546.5248232407 -407.7248232407
NZO/HlLtJ f 23.0 441.4786774881 894.1067614487 -848.1067614487
NZO/HlLtJ m 17.5 540.6987460823 1084.3835385189 -1049.3835385189
PWK/PhJ f 46.875 270.3493730411 580.3167692594 -486.5667692594
PWK/PhJ m 1629.1428571429 289.0156367569 2199.4160961038 1058.8696181819
WSB/EiJ f 82.75 270.3493730411 616.1917692594 -450.6917692594
WSB/EiJ m 20.0 312.1725666011 635.9654981579 -595.9654981579


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 45.4583333333 292.0106974428 621.6412973784 -530.7246307117
A/J both 177.4666666667 231.513371614 634.2789062208 -279.3455728875
C57BL/6J both 44.4405594406 156.6310887381 353.4982952053 -264.6171763242
CAST/EiJ both 65.4285714286 188.4151434287 437.2012385343 -306.3440956771
CC001/UncJ both 29.3333333333 349.0195398153 718.0036961711 -659.3370295044
CC002/UncJ both 11.4583333333 292.0106974428 587.6412973784 -564.7246307117
CC003/UncJ both 26.25 349.0195398153 714.9203628377 -662.4203628377
CC005/TauUncJ both 56.6666666667 349.0195398153 745.3370295044 -632.0036961711
CC006/TauUncJ both 36.75 382.3317499338 791.150584823 -717.650584823
CC009/UncJ both 13.75 382.3317499338 768.150584823 -740.650584823
CC011/UncJ both 88.1666666667 349.0195398153 776.8370295044 -600.5036961711
CC013/GeniUncJ both 204.0 382.3317499338 958.400584823 -550.400584823
CC016/GeniUncJ both 16.5416666667 292.0106974428 592.7246307117 -559.6412973784
CC017/UncJ both 4.5833333333 349.0195398153 693.2536961711 -684.0870295044
CC018/UncJ both 77.0 382.3317499338 831.400584823 -677.400584823
CC019/TauUncJ both 38.75 270.3493730411 572.1917692594 -494.6917692594
CC025/GeniUncJ both 82.0 312.1725666011 697.9654981579 -533.9654981579
CC027/GeniUncJ both 23.25 331.1090081161 676.5800710866 -630.0800710865
CC028/GeniUncJ both 103.8333333333 312.1725666011 719.7988314912 -512.1321648245
CC030/GeniUncJ both 11.5 382.3317499338 765.900584823 -742.900584823
CC033/GeniUncJ both 68.75 382.3317499338 823.150584823 -685.650584823
CC036/UncJ both 99.1666666667 312.1725666011 715.1321648245 -516.7988314912
CC037/TauUncJ both 15.8333333333 349.0195398153 704.5036961711 -672.8370295044
CC040/TauUncJ both 16.5 349.0195398153 705.1703628377 -672.1703628377
CC041/TauUncJ both 67.8333333333 349.0195398153 756.5036961711 -620.8370295044
CC043/GeniUncJ both 86.25 382.3317499338 840.650584823 -668.150584823
CC059/TauUncJ both 205.55 256.4759348426 711.6172969789 -300.5172969789
CC061/GeniUncJ both 212.4166666667 349.0195398153 901.0870295044 -476.2536961711
CC078/TauUncJ both 29.1666666667 312.1725666011 645.1321648245 -586.7988314912
CC084/TauJ both 93.0 382.3317499338 847.400584823 -661.400584823
NOD/ShiLtJ both 62.325 181.3558727383 420.1686174306 -295.5186174306
NZO/HlLtJ both 20.25 349.0195398153 708.9203628377 -668.4203628377
PWK/PhJ both 838.0089285714 197.8754796543 1228.448324722 447.5695324209
WSB/EiJ both 51.375 206.4827443408 458.7978810804 -356.0478810804




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA