Project measure / variable:   CSNA03   pct_correct_cc_acq_JAX

ID, description, units MPD:110495   pct_correct_cc_acq_JAX   percentage of responses that are correct (reversal learning assay), CC   [%]  acquisition  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of responses that are correct (reversal learning assay), CC acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means64.82   % 66.2   %
Median of the strain means65.31   % 66.48   %
SD of the strain means± 8.9793 ± 10.467
Coefficient of variation (CV)0.1385 0.1581
Min–max range of strain means43.997   –   90.0   % 40.659   –   95.0   %
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 661.9477 661.9477 3.7277 0.055
strain 34 7789.429 229.1009 1.2902 0.1456
sex:strain 34 6243.9656 183.646 1.0342 0.4249
Residuals 192 34094.0803 177.5733


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 68.33 4.1332   3 2.3863 0.0605 63.64, 71.43 0.39
129S1/SvImJ m 80.56 18.098   4 9.0489 0.2246 59.09, 100.0 1.37
A/J f 71.36 15.386   6 6.2813 0.2156 55.12, 95.0 0.73
A/J m 54.35 18.156   5 8.1198 0.3341 29.889, 73.85 -1.13
C57BL/6J f 61.98 13.44   14 3.592 0.2169 39.041, 90.0 -0.32
C57BL/6J m 63.65 12.875   11 3.8819 0.2023 45.033, 90.0 -0.24
CAST/EiJ f 62.03 12.668   10 4.0061 0.2042 47.535, 90.0 -0.31
CAST/EiJ m 66.48 6.7151   8 2.3742 0.101 58.18, 75.68 0.03
CC001/UncJ f 65.31 10.006   3 5.7769 0.1532 58.62, 76.81 0.05
CC001/UncJ m 52.45 4.1147   2   2.9095 0.0784 49.541, 55.36 -1.31
CC002/UncJ f 74.58 19.614   4 9.8069 0.263 58.06, 100.0 1.09
CC002/UncJ m 69.74 9.9601   4 4.9801 0.1428 57.28, 80.0 0.34
CC003/UncJ f 72.1 25.314   2   17.9 0.3511 54.2, 90.0 0.81
CC003/UncJ m 60.55 9.8053   3 5.6611 0.1619 50.7, 70.31 -0.54
CC004/TauUncJ f 60.23 0.0   1   0.0 0.0 60.23, 60.23 -0.51
CC004/TauUncJ m 81.28 12.339   2   8.725 0.1518 72.55, 90.0 1.44
CC005/TauUncJ f 57.79 23.782   3 13.73 0.4115 35.204, 82.61 -0.78
CC005/TauUncJ m 79.04 8.4287   2   5.96 0.1066 73.08, 85.0 1.23
CC006/TauUncJ f 47.978 4.3013   2   3.0415 0.0897 44.937, 51.02 -1.88
CC006/TauUncJ m 73.19 9.6308   2   6.81 0.1316 66.38, 80.0 0.67
CC007/UncJ f 85.0 0.0   1   0.0 0.0 85.0, 85.0 2.25
CC008/GeniUncJ f 70.21 0.0   1   0.0 0.0 70.21, 70.21 0.6
CC008/GeniUncJ m 80.0 0.0   1   0.0 0.0 80.0, 80.0 1.32
CC009/UncJ f 66.42 4.3699   2   3.09 0.0658 63.33, 69.51 0.18
CC009/UncJ m 76.76 11.653   2   8.24 0.1518 68.52, 85.0 1.01
CC011/UncJ f 65.89 11.037   3 6.372 0.1675 55.08, 77.14 0.12
CC011/UncJ m 84.24 11.154   3 6.4399 0.1324 72.73, 95.0 1.72
CC012/GeniUncJ f 64.15 10.991   3 6.3456 0.1713 54.29, 76.0 -0.07
CC012/GeniUncJ m 61.05 0.0   1   0.0 0.0 61.05, 61.05 -0.49
CC013/GeniUncJ f 65.55 2.3829   2   1.685 0.0364 63.86, 67.23 0.08
CC013/GeniUncJ m 60.9 8.16   2   5.77 0.134 55.13, 66.67 -0.51
CC015/UncJ f 74.16 0.0   1   0.0 0.0 74.16, 74.16 1.04
CC015/UncJ m 40.659 0.0   1   0.0 0.0 40.659, 40.659 -2.44
CC016/GeniUncJ f 56.29 14.764   3 8.5243 0.2623 40.659, 70.0 -0.95
CC016/GeniUncJ m 72.67 21.8   4 10.9 0.3 41.509, 90.0 0.62
CC017/UncJ f 61.12 18.086   2   12.789 0.2959 48.333, 73.91 -0.41
CC017/UncJ m 68.12 14.09   3 8.1351 0.2068 51.85, 76.32 0.18
CC018/UncJ f 72.95 23.462   3 13.546 0.3216 58.18, 100.0 0.91
CC018/UncJ m 73.84 8.7045   2   6.155 0.1179 67.69, 80.0 0.73
CC019/TauUncJ f 60.26 18.006   4 9.003 0.2988 45.238, 85.0 -0.51
CC019/TauUncJ m 69.64 15.83   4 7.9152 0.2273 53.95, 91.67 0.33
CC023/GeniUncJ f 79.88 7.2408   2   5.12 0.0906 74.76, 85.0 1.68
CC023/GeniUncJ m 71.6 0.0   1   0.0 0.0 71.6, 71.6 0.52
CC025/GeniUncJ f 64.37 13.266   3 7.6592 0.2061 56.52, 79.69 -0.05
CC025/GeniUncJ m 63.05 1.4841   3 0.85687 0.0235 61.67, 64.62 -0.3
CC026/GeniUncJ f 65.62 0.0   1   0.0 0.0 65.62, 65.62 0.09
CC026/GeniUncJ m 71.38 6.6609   2   4.71 0.0933 66.67, 76.09 0.49
CC027/GeniUncJ f 61.45 3.0971   2   2.19 0.0504 59.26, 63.64 -0.37
CC027/GeniUncJ m 53.36 4.1819   4 2.0909 0.0784 49.593, 57.81 -1.23
CC028/GeniUncJ f 60.12 5.43   3 3.135 0.0903 53.98, 64.29 -0.52
CC028/GeniUncJ m 53.12 15.201   3 8.7764 0.2862 35.772, 64.12 -1.25
CC029/UncJ f 52.38 0.0   1   0.0 0.0 52.38, 52.38 -1.38
CC029/UncJ m 64.42 0.0   1   0.0 0.0 64.42, 64.42 -0.17
CC030/GeniUncJ f 43.997 12.308   2   8.703 0.2797 35.294, 52.7 -2.32
CC030/GeniUncJ m 52.85 12.594   2   8.9055 0.2383 43.949, 61.76 -1.28
CC032/GeniUncJ f 66.52 19.071   2   13.485 0.2867 53.03, 80.0 0.19
CC033/GeniUncJ f 51.02 0.67882   2   0.48 0.0133 50.54, 51.5 -1.54
CC033/GeniUncJ m 58.16 1.6405   2   1.16 0.0282 57.0, 59.32 -0.77
CC035/UncJ m 60.22 0.0   1   0.0 0.0 60.22, 60.22 -0.57
CC036/UncJ f 65.36 3.3877   3 1.9559 0.0518 61.9, 68.67 0.06
CC036/UncJ m 63.49 2.754   3 1.59 0.0434 61.9, 66.67 -0.26
CC037/TauUncJ f 69.08 8.3721   2   5.92 0.1212 63.16, 75.0 0.47
CC037/TauUncJ m 70.24 17.148   3 9.9004 0.2441 59.26, 90.0 0.39
CC040/TauUncJ f 62.54 2.7445   3 1.5845 0.0439 60.0, 65.45 -0.25
CC040/TauUncJ m 75.22 14.666   3 8.4676 0.195 60.67, 90.0 0.86
CC041/TauUncJ f 66.68 13.158   3 7.5969 0.1973 53.69, 80.0 0.21
CC041/TauUncJ m 60.64 8.9025   2   6.295 0.1468 54.35, 66.94 -0.53
CC043/GeniUncJ f 52.57 2.5739   2   1.82 0.049 50.75, 54.39 -1.36
CC043/GeniUncJ m 57.64 9.0015   2   6.365 0.1562 51.27, 64.0 -0.82
CC044/UncJ f 90.0 0.0   1   0.0 0.0 90.0, 90.0 2.8
CC051/TauUncJ f 67.0 0.0   1   0.0 0.0 67.0, 67.0 0.24
CC051/TauUncJ m 65.96 0.0   1   0.0 0.0 65.96, 65.96 -0.02
CC057/UncJ f 70.06 10.189   2   7.205 0.1454 62.86, 77.27 0.58
CC057/UncJ m 66.92 0.91217   2   0.645 0.0136 66.28, 67.57 0.07
CC059/TauUncJ f 61.82 14.508   4 7.254 0.2347 41.935, 73.13 -0.33
CC059/TauUncJ m 59.28 15.355   5 6.8668 0.259 42.308, 78.16 -0.66
CC060/UncJ f 70.0 0.0   1   0.0 0.0 70.0, 70.0 0.58
CC060/UncJ m 66.28 0.0   1   0.0 0.0 66.28, 66.28 0.01
CC061/GeniUncJ f 48.67 11.821   3 6.8247 0.2429 35.57, 58.54 -1.8
CC061/GeniUncJ m 44.215 0.65832   2   0.4655 0.0149 43.75, 44.681 -2.1
CC074/UncJ f 76.6 0.0   1   0.0 0.0 76.6, 76.6 1.31
CC074/UncJ m 71.43 0.0   1   0.0 0.0 71.43, 71.43 0.5
CC075/UncJ f 71.33 3.6487   2   2.58 0.0512 68.75, 73.91 0.73
CC075/UncJ m 68.0 0.0   1   0.0 0.0 68.0, 68.0 0.17
CC078/TauUncJ f 51.45 0.57813   3 0.33378 0.0112 50.79, 51.85 -1.49
CC078/TauUncJ m 76.14 13.88   3 8.0137 0.1823 62.24, 90.0 0.95
CC079/TauUncJ f 61.11 0.0   1   0.0 0.0 61.11, 61.11 -0.41
CC079/TauUncJ m 53.91 5.5366   2   3.915 0.1027 50.0, 57.83 -1.17
CC080/TauUncJ f 59.78 13.838   2   9.785 0.2315 50.0, 69.57 -0.56
CC080/TauUncJ m 95.0 0.0   1   0.0 0.0 95.0, 95.0 2.75
CC084/TauJ f 75.98 33.962   2   24.015 0.447 51.97, 100.0 1.24
CC084/TauJ m 53.1 12.328   2   8.7175 0.2322 44.385, 61.82 -1.25
NOD/ShiLtJ f 64.8 17.272   8 6.1067 0.2665 44.444, 95.0 0.0
NOD/ShiLtJ m 70.38 13.181   11 3.9743 0.1873 50.68, 90.0 0.4
NZO/HlLtJ f 69.4 13.902   3 8.0262 0.2003 58.33, 85.0 0.51
NZO/HlLtJ m 70.95 10.338   2   7.31 0.1457 63.64, 78.26 0.45
PWK/PhJ f 62.23 11.957   9 3.9857 0.1921 48.305, 80.0 -0.29
PWK/PhJ m 65.77 11.317   8 4.0012 0.1721 42.478, 80.0 -0.04
WSB/EiJ f 60.12 12.508   8 4.4223 0.2081 36.283, 73.02 -0.52
WSB/EiJ m 72.11 12.445   6 5.0805 0.1726 58.21, 95.0 0.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 68.3333333333 7.6935759958 83.508115633 53.1585510336
129S1/SvImJ m 80.565 6.6628322583 93.7067469684 67.4232530316
A/J f 71.36 5.4401797582 82.0901914671 60.6298085329
A/J m 54.3478 5.9594183409 66.1021358258 42.5934641742
C57BL/6J f 61.9759285714 3.561433648 69.0004878028 54.9513693401
C57BL/6J m 63.6546363636 4.0178390258 71.5794079607 55.7298647665
CAST/EiJ f 62.0265 4.2139451208 70.3380705708 53.7149294292
CAST/EiJ m 66.485 4.7113338717 75.777618398 57.192381602
CC001/UncJ f 65.3066666667 7.6935759958 80.4814489664 50.131884367
CC001/UncJ m 52.4505 9.4226677435 71.035736796 33.865263204
CC002/UncJ f 74.575 6.6628322583 87.7167469684 61.4332530316
CC002/UncJ m 69.7375 6.6628322583 82.8792469684 56.5957530316
CC003/UncJ f 72.1 9.4226677435 90.685236796 53.514763204
CC003/UncJ m 60.5466666667 7.6935759958 75.7214489664 45.371884367
CC005/TauUncJ f 57.7913333333 7.6935759958 72.966115633 42.6165510336
CC005/TauUncJ m 79.04 9.4226677435 97.625236796 60.454763204
CC006/TauUncJ f 47.9785 9.4226677435 66.563736796 29.393263204
CC006/TauUncJ m 73.19 9.4226677435 91.775236796 54.604763204
CC009/UncJ f 66.42 9.4226677435 85.005236796 47.834763204
CC009/UncJ m 76.76 9.4226677435 95.345236796 58.174763204
CC011/UncJ f 65.89 7.6935759958 81.0647822997 50.7152177003
CC011/UncJ m 84.2433333333 7.6935759958 99.418115633 69.0685510336
CC013/GeniUncJ f 65.545 9.4226677435 84.130236796 46.959763204
CC013/GeniUncJ m 60.9 9.4226677435 79.485236796 42.314763204
CC016/GeniUncJ f 56.2896666667 7.6935759958 71.4644489664 41.114884367
CC016/GeniUncJ m 72.67475 6.6628322583 85.8164969684 59.5330030316
CC017/UncJ f 61.1215 9.4226677435 79.706736796 42.536263204
CC017/UncJ m 68.12 7.6935759958 83.2947822997 52.9452177003
CC018/UncJ f 72.9466666667 7.6935759958 88.1214489664 57.771884367
CC018/UncJ m 73.845 9.4226677435 92.430236796 55.259763204
CC019/TauUncJ f 60.262 6.6628322583 73.4037469684 47.1202530316
CC019/TauUncJ m 69.635 6.6628322583 82.7767469684 56.4932530316
CC025/GeniUncJ f 64.3733333333 7.6935759958 79.548115633 49.1985510336
CC025/GeniUncJ m 63.05 7.6935759958 78.2247822997 47.8752177003
CC027/GeniUncJ f 61.45 9.4226677435 80.035236796 42.864763204
CC027/GeniUncJ m 53.36075 6.6628322583 66.5024969684 40.2190030316
CC028/GeniUncJ f 60.12 7.6935759958 75.2947822997 44.9452177003
CC028/GeniUncJ m 53.1173333333 7.6935759958 68.292115633 37.9425510336
CC030/GeniUncJ f 43.997 9.4226677435 62.582236796 25.411763204
CC030/GeniUncJ m 52.8545 9.4226677435 71.439736796 34.269263204
CC033/GeniUncJ f 51.02 9.4226677435 69.605236796 32.434763204
CC033/GeniUncJ m 58.16 9.4226677435 76.745236796 39.574763204
CC036/UncJ f 65.3633333333 7.6935759958 80.538115633 50.1885510336
CC036/UncJ m 63.49 7.6935759958 78.6647822997 48.3152177003
CC037/TauUncJ f 69.08 9.4226677435 87.665236796 50.494763204
CC037/TauUncJ m 70.24 7.6935759958 85.4147822997 55.0652177003
CC040/TauUncJ f 62.5366666667 7.6935759958 77.7114489664 47.361884367
CC040/TauUncJ m 75.2233333333 7.6935759958 90.398115633 60.0485510336
CC041/TauUncJ f 66.6766666667 7.6935759958 81.8514489664 51.501884367
CC041/TauUncJ m 60.645 9.4226677435 79.230236796 42.059763204
CC043/GeniUncJ f 52.57 9.4226677435 71.155236796 33.984763204
CC043/GeniUncJ m 57.635 9.4226677435 76.220236796 39.049763204
CC057/UncJ f 70.065 9.4226677435 88.650236796 51.479763204
CC057/UncJ m 66.925 9.4226677435 85.510236796 48.339763204
CC059/TauUncJ f 61.81875 6.6628322583 74.9604969684 48.6770030316
CC059/TauUncJ m 59.2846 5.9594183409 71.0389358258 47.5302641742
CC061/GeniUncJ f 48.67 7.6935759958 63.8447822997 33.4952177003
CC061/GeniUncJ m 44.2155 9.4226677435 62.800736796 25.630263204
CC078/TauUncJ f 51.4533333333 7.6935759958 66.628115633 36.2785510336
CC078/TauUncJ m 76.1433333333 7.6935759958 91.318115633 60.9685510336
CC084/TauJ f 75.985 9.4226677435 94.570236796 57.399763204
CC084/TauJ m 53.1025 9.4226677435 71.687736796 34.517263204
NOD/ShiLtJ f 64.80175 4.7113338717 74.094368398 55.509131602
NOD/ShiLtJ m 70.3754545455 4.0178390258 78.3002261426 62.4506829483
NZO/HlLtJ f 69.3966666667 7.6935759958 84.5714489664 54.221884367
NZO/HlLtJ m 70.95 9.4226677435 89.535236796 52.364763204
PWK/PhJ f 62.2326666667 4.4418881722 70.9938313123 53.471502021
PWK/PhJ m 65.771 4.7113338717 75.063618398 56.478381602
WSB/EiJ f 60.120375 4.7113338717 69.412993398 50.827756602
WSB/EiJ m 72.105 5.4401797582 82.8351914671 61.3748085329


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 74.4491666667 5.0888221944 84.4863417078 64.4119916255
A/J both 62.8539 4.0345452892 70.8116229725 54.8961770275
C57BL/6J both 62.8152824675 2.6845316196 68.1102432148 57.5203217202
CAST/EiJ both 64.25575 3.1604588406 70.4894279281 58.0220720719
CC001/UncJ both 58.8785833333 6.0823058745 70.8753020994 46.8818645673
CC002/UncJ both 72.15625 4.7113338717 81.448868398 62.863631602
CC003/UncJ both 66.3233333333 6.0823058745 78.3200520994 54.3266145673
CC005/TauUncJ both 68.4156666667 6.0823058745 80.4123854327 56.4189479006
CC006/TauUncJ both 60.58425 6.6628322583 73.7259969684 47.4425030316
CC009/UncJ both 71.59 6.6628322583 84.7317469684 58.4482530316
CC011/UncJ both 75.0666666667 5.4401797582 85.7968581338 64.3364751995
CC013/GeniUncJ both 63.2225 6.6628322583 76.3642469684 50.0807530316
CC016/GeniUncJ both 64.4822083333 5.0888221944 74.5193833745 54.4450332922
CC017/UncJ both 64.62075 6.0823058745 76.6174687661 52.6240312339
CC018/UncJ both 73.3958333333 6.0823058745 85.3925520994 61.3991145673
CC019/TauUncJ both 64.9485 4.7113338717 74.241118398 55.655881602
CC025/GeniUncJ both 63.7116666667 5.4401797582 74.4418581338 52.9814751995
CC027/GeniUncJ both 57.405375 5.7701819968 68.7864617248 46.0242882752
CC028/GeniUncJ both 56.6186666667 5.4401797582 67.3488581338 45.8884751995
CC030/GeniUncJ both 48.42575 6.6628322583 61.5674969684 35.2840030316
CC033/GeniUncJ both 54.59 6.6628322583 67.7317469684 41.4482530316
CC036/UncJ both 64.4266666667 5.4401797582 75.1568581338 53.6964751995
CC037/TauUncJ both 69.66 6.0823058745 81.6567187661 57.6632812339
CC040/TauUncJ both 68.88 5.4401797582 79.6101914671 58.1498085329
CC041/TauUncJ both 63.6608333333 6.0823058745 75.6575520994 51.6641145673
CC043/GeniUncJ both 55.1025 6.6628322583 68.2442469684 41.9607530316
CC057/UncJ both 68.495 6.6628322583 81.6367469684 55.3532530316
CC059/TauUncJ both 60.551675 4.4695637556 69.3674268694 51.7359231306
CC061/GeniUncJ both 46.44275 6.0823058745 58.4394687661 34.4460312339
CC078/TauUncJ both 63.7983333333 5.4401797582 74.5285248005 53.0681418662
CC084/TauJ both 64.54375 6.6628322583 77.6854969684 51.4020030316
NOD/ShiLtJ both 67.5886022727 3.095952894 73.6950488982 61.4821556473
NZO/HlLtJ both 70.1733333333 6.0823058745 82.1700520994 58.1766145673
PWK/PhJ both 64.0018333333 3.2375545318 70.3875745323 57.6160921344
WSB/EiJ both 66.1126875 3.5983406819 73.2100420355 59.0153329645




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA