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Project measure / variable:   CSNA03   correct_cc_rev_JAX

ID, description, units MPD:110492   correct_cc_rev_JAX   total number of correct responses (successful response in central nose poke hole with subsequent response in correct flanking hole) (reversal learning assay), CC   [n]  reversal  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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  STRAIN COMPARISON PLOT
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CSNA03 - total number of correct responses (successful response in central nose poke hole with subsequent response in correct flanking hole) (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means56.27   n 59.61   n
Median of the strain means53.67   n 54.0   n
SD of the strain means± 21.555 ± 24.886
Coefficient of variation (CV)0.383 0.4175
Min–max range of strain means12.0   –   147.0   n 21.0   –   124.0   n
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 102.8143 102.8143 0.0876 0.7675
strain 34 49226.4448 1447.8366 1.2339 0.1901
sex:strain 34 31899.5075 938.2208 0.7996 0.7775
Residuals 192 225280.5464 1173.3362


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 30.667 11.59   3 6.6916 0.3779 23.0, 44.0 -1.19
129S1/SvImJ m 41.75 18.41   4 9.2048 0.441 26.0, 61.0 -0.72
A/J f 59.5 21.861   6 8.9247 0.3674 34.0, 98.0 0.15
A/J m 55.4 20.732   5 9.2715 0.3742 38.0, 80.0 -0.17
C57BL/6J f 60.36 43.473   14 11.619 0.7203 28.0, 203.0 0.19
C57BL/6J m 62.73 45.756   11 13.796 0.7294 11.0, 173.0 0.13
CAST/EiJ f 73.0 32.335   10 10.225 0.4429 26.0, 132.0 0.78
CAST/EiJ m 69.62 51.4   8 18.174 0.7383 18.0, 171.0 0.4
CC001/UncJ f 57.67 17.039   3 9.8376 0.2955 40.0, 74.0 0.06
CC001/UncJ m 67.5 65.76   2   46.5 0.9742 21.0, 114.0 0.32
CC002/UncJ f 59.5 22.487   4 11.244 0.3779 43.0, 92.0 0.15
CC002/UncJ m 62.75 17.914   4 8.9571 0.2855 47.0, 82.0 0.13
CC003/UncJ f 147.0 98.99   2   70.0 0.6734 77.0, 217.0 4.21
CC003/UncJ m 73.67 32.868   3 18.977 0.4462 46.0, 110.0 0.56
CC004/TauUncJ f 43.0 0.0   1   0.0 0.0 43.0, 43.0 -0.62
CC004/TauUncJ m 93.0 32.527   2   23.0 0.3498 70.0, 116.0 1.34
CC005/TauUncJ f 51.67 20.793   3 12.005 0.4024 28.0, 67.0 -0.21
CC005/TauUncJ m 43.0 4.2426   2   3.0 0.0987 40.0, 46.0 -0.67
CC006/TauUncJ f 31.5 10.607   2   7.5 0.3367 24.0, 39.0 -1.15
CC006/TauUncJ m 54.5 17.678   2   12.5 0.3244 42.0, 67.0 -0.21
CC007/UncJ f 43.0 0.0   1   0.0 0.0 43.0, 43.0 -0.62
CC008/GeniUncJ f 12.0 0.0   1   0.0 0.0 12.0, 12.0 -2.05
CC008/GeniUncJ m 48.0 0.0   1   0.0 0.0 48.0, 48.0 -0.47
CC009/UncJ f 76.5 57.28   2   40.5 0.7487 36.0, 117.0 0.94
CC009/UncJ m 50.0 1.4142   2   1.0 0.0283 49.0, 51.0 -0.39
CC011/UncJ f 30.667 24.502   3 14.146 0.799 6.0, 55.0 -1.19
CC011/UncJ m 53.33 20.551   3 11.865 0.3853 32.0, 73.0 -0.25
CC012/GeniUncJ f 53.67 5.8595   3 3.383 0.1092 47.0, 58.0 -0.12
CC012/GeniUncJ m 21.0 0.0   1   0.0 0.0 21.0, 21.0 -1.55
CC013/GeniUncJ f 30.5 2.1213   2   1.5 0.0696 29.0, 32.0 -1.2
CC013/GeniUncJ m 49.5 24.749   2   17.5 0.5 32.0, 67.0 -0.41
CC015/UncJ f 42.0 0.0   1   0.0 0.0 42.0, 42.0 -0.66
CC015/UncJ m 39.0 0.0   1   0.0 0.0 39.0, 39.0 -0.83
CC016/GeniUncJ f 68.0 7.5498   3 4.3589 0.111 61.0, 76.0 0.54
CC016/GeniUncJ m 39.0 23.958   4 11.979 0.6143 23.0, 74.0 -0.83
CC017/UncJ f 65.5 6.364   2   4.5 0.0972 61.0, 70.0 0.43
CC017/UncJ m 59.0 24.515   3 14.154 0.4155 35.0, 84.0 -0.02
CC018/UncJ f 79.0 35.679   3 20.599 0.4516 48.0, 118.0 1.05
CC018/UncJ m 36.5 9.1924   2   6.5 0.2518 30.0, 43.0 -0.93
CC019/TauUncJ f 83.5 83.71   4 41.854 1.0025 21.0, 207.0 1.26
CC019/TauUncJ m 71.75 34.702   4 17.351 0.4837 20.0, 93.0 0.49
CC023/GeniUncJ f 30.5 3.5355   2   2.5 0.1159 28.0, 33.0 -1.2
CC023/GeniUncJ m 41.0 0.0   1   0.0 0.0 41.0, 41.0 -0.75
CC025/GeniUncJ f 41.333 26.577   3 15.344 0.643 25.0, 72.0 -0.69
CC025/GeniUncJ m 54.0 11.533   3 6.6583 0.2136 43.0, 66.0 -0.23
CC026/GeniUncJ f 72.0 0.0   1   0.0 0.0 72.0, 72.0 0.73
CC026/GeniUncJ m 59.0 49.497   2   35.0 0.8389 24.0, 94.0 -0.02
CC027/GeniUncJ f 52.5 31.82   2   22.5 0.6061 30.0, 75.0 -0.17
CC027/GeniUncJ m 69.0 25.729   4 12.865 0.3729 31.0, 87.0 0.38
CC028/GeniUncJ f 46.333 23.544   3 13.593 0.5082 22.0, 69.0 -0.46
CC028/GeniUncJ m 59.67 23.459   3 13.544 0.3932 34.0, 80.0 0.0
CC029/UncJ f 42.0 0.0   1   0.0 0.0 42.0, 42.0 -0.66
CC029/UncJ m 32.0 0.0   1   0.0 0.0 32.0, 32.0 -1.11
CC030/GeniUncJ f 42.5 14.849   2   10.5 0.3494 32.0, 53.0 -0.64
CC030/GeniUncJ m 71.5 10.607   2   7.5 0.1483 64.0, 79.0 0.48
CC032/GeniUncJ f 74.5 0.70711   2   0.5 0.0095 74.0, 75.0 0.85
CC033/GeniUncJ f 85.5 4.9497   2   3.5 0.0579 82.0, 89.0 1.36
CC033/GeniUncJ m 39.5 2.1213   2   1.5 0.0537 38.0, 41.0 -0.81
CC035/UncJ m 124.0 0.0   1   0.0 0.0 124.0, 124.0 2.59
CC036/UncJ f 29.667 10.97   3 6.3333 0.3698 21.0, 42.0 -1.23
CC036/UncJ m 34.667 5.8595   3 3.383 0.169 28.0, 39.0 -1.0
CC037/TauUncJ f 50.0 22.627   2   16.0 0.4525 34.0, 66.0 -0.29
CC037/TauUncJ m 34.333 15.885   3 9.1712 0.4627 16.0, 44.0 -1.02
CC040/TauUncJ f 33.333 16.166   3 9.3333 0.485 16.0, 48.0 -1.06
CC040/TauUncJ m 106.0 48.508   3 28.006 0.4576 77.0, 162.0 1.86
CC041/TauUncJ f 48.0 13.892   3 8.0208 0.2894 39.0, 64.0 -0.38
CC041/TauUncJ m 41.5 9.1924   2   6.5 0.2215 35.0, 48.0 -0.73
CC043/GeniUncJ f 72.5 62.93   2   44.5 0.868 28.0, 117.0 0.75
CC043/GeniUncJ m 87.5 6.364   2   4.5 0.0727 83.0, 92.0 1.12
CC044/UncJ f 79.0 0.0   1   0.0 0.0 79.0, 79.0 1.05
CC051/TauUncJ f 71.0 0.0   1   0.0 0.0 71.0, 71.0 0.68
CC051/TauUncJ m 121.0 0.0   1   0.0 0.0 121.0, 121.0 2.47
CC057/UncJ f 32.5 4.9497   2   3.5 0.1523 29.0, 36.0 -1.1
CC057/UncJ m 49.0 16.971   2   12.0 0.3463 37.0, 61.0 -0.43
CC059/TauUncJ f 76.5 24.474   4 12.237 0.3199 62.0, 113.0 0.94
CC059/TauUncJ m 86.8 29.423   5 13.158 0.339 40.0, 115.0 1.09
CC060/UncJ f 65.0 0.0   1   0.0 0.0 65.0, 65.0 0.4
CC060/UncJ m 50.0 0.0   1   0.0 0.0 50.0, 50.0 -0.39
CC061/GeniUncJ f 64.33 22.679   3 13.094 0.3525 47.0, 90.0 0.37
CC061/GeniUncJ m 113.0 19.799   2   14.0 0.1752 99.0, 127.0 2.15
CC074/UncJ f 56.0 0.0   1   0.0 0.0 56.0, 56.0 -0.01
CC074/UncJ m 46.0 0.0   1   0.0 0.0 46.0, 46.0 -0.55
CC075/UncJ f 51.5 14.849   2   10.5 0.2883 41.0, 62.0 -0.22
CC075/UncJ m 36.0 0.0   1   0.0 0.0 36.0, 36.0 -0.95
CC078/TauUncJ f 62.0 27.404   3 15.822 0.442 31.0, 83.0 0.27
CC078/TauUncJ m 57.0 7.9373   3 4.5826 0.1393 51.0, 66.0 -0.1
CC079/TauUncJ f 44.0 0.0   1   0.0 0.0 44.0, 44.0 -0.57
CC079/TauUncJ m 32.0 7.0711   2   5.0 0.221 27.0, 37.0 -1.11
CC080/TauUncJ f 52.0 8.4853   2   6.0 0.1632 46.0, 58.0 -0.2
CC080/TauUncJ m 122.0 0.0   1   0.0 0.0 122.0, 122.0 2.51
CC084/TauJ f 81.0 35.355   2   25.0 0.4365 56.0, 106.0 1.15
CC084/TauJ m 42.0 2.8284   2   2.0 0.0673 40.0, 44.0 -0.71
NOD/ShiLtJ f 40.75 10.361   8 3.6633 0.2543 26.0, 56.0 -0.72
NOD/ShiLtJ m 57.18 37.207   11 11.218 0.6507 16.0, 156.0 -0.1
NZO/HlLtJ f 47.667 8.1445   3 4.7022 0.1709 42.0, 57.0 -0.4
NZO/HlLtJ m 44.0 2.8284   2   2.0 0.0643 42.0, 46.0 -0.63
PWK/PhJ f 71.22 53.43   9 17.81 0.7502 38.0, 211.0 0.69
PWK/PhJ m 71.0 54.49   8 19.264 0.7674 31.0, 194.0 0.46
WSB/EiJ f 56.5 17.08   8 6.0386 0.3023 22.0, 74.0 0.01
WSB/EiJ m 49.333 14.024   6 5.7252 0.2843 30.0, 72.0 -0.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 30.6666666667 19.7765532802 69.6738709669 -8.3405376336
129S1/SvImJ m 41.75 17.12699754 75.5312298547 7.9687701453
A/J f 59.5 13.984134933 87.0822586759 31.9177413241
A/J m 55.4 15.3188523 85.6148505274 25.1851494726
C57BL/6J f 60.3571428571 9.1547652655 78.4139697457 42.3003159686
C57BL/6J m 62.7272727273 10.3279681137 83.0981207972 42.3564246573
CAST/EiJ f 73.0 10.8320643413 94.3651257005 51.6348742995
CAST/EiJ m 69.625 12.1106161019 93.511936707 45.738063293
CC001/UncJ f 57.6666666667 19.7765532803 96.6738709669 18.6594623664
CC001/UncJ m 67.5 24.2212322038 115.2738734141 19.7261265859
CC002/UncJ f 59.5 17.12699754 93.2812298547 25.7187701453
CC002/UncJ m 62.75 17.12699754 96.5312298547 28.9687701453
CC003/UncJ f 147.0 24.2212322038 194.7738734141 99.2261265859
CC003/UncJ m 73.6666666667 19.7765532802 112.6738709669 34.6594623664
CC005/TauUncJ f 51.6666666667 19.7765532803 90.6738709669 12.6594623664
CC005/TauUncJ m 43.0 24.2212322038 90.7738734141 -4.7738734141
CC006/TauUncJ f 31.5 24.2212322038 79.2738734141 -16.2738734141
CC006/TauUncJ m 54.5 24.2212322038 102.2738734141 6.7261265859
CC009/UncJ f 76.5 24.2212322038 124.2738734141 28.7261265859
CC009/UncJ m 50.0 24.2212322038 97.7738734141 2.2261265859
CC011/UncJ f 30.6666666667 19.7765532802 69.6738709669 -8.3405376336
CC011/UncJ m 53.3333333333 19.7765532803 92.3405376336 14.3261290331
CC013/GeniUncJ f 30.5 24.2212322038 78.2738734141 -17.2738734141
CC013/GeniUncJ m 49.5 24.2212322038 97.2738734141 1.7261265859
CC016/GeniUncJ f 68.0 19.7765532802 107.0072043003 28.9927956997
CC016/GeniUncJ m 39.0 17.12699754 72.7812298547 5.2187701453
CC017/UncJ f 65.5 24.2212322038 113.2738734141 17.7261265859
CC017/UncJ m 59.0 19.7765532802 98.0072043003 19.9927956997
CC018/UncJ f 79.0 19.7765532802 118.0072043003 39.9927956997
CC018/UncJ m 36.5 24.2212322038 84.2738734141 -11.2738734141
CC019/TauUncJ f 83.5 17.12699754 117.2812298547 49.7187701453
CC019/TauUncJ m 71.75 17.12699754 105.5312298547 37.9687701453
CC025/GeniUncJ f 41.3333333333 19.7765532802 80.3405376336 2.3261290331
CC025/GeniUncJ m 54.0 19.7765532803 93.0072043003 14.9927956997
CC027/GeniUncJ f 52.5 24.2212322038 100.2738734141 4.7261265859
CC027/GeniUncJ m 69.0 17.12699754 102.7812298547 35.2187701453
CC028/GeniUncJ f 46.3333333333 19.7765532802 85.3405376336 7.3261290331
CC028/GeniUncJ m 59.6666666667 19.7765532802 98.6738709669 20.6594623664
CC030/GeniUncJ f 42.5 24.2212322038 90.2738734141 -5.2738734141
CC030/GeniUncJ m 71.5 24.2212322038 119.2738734141 23.7261265859
CC033/GeniUncJ f 85.5 24.2212322038 133.2738734141 37.7261265859
CC033/GeniUncJ m 39.5 24.2212322038 87.2738734141 -8.2738734141
CC036/UncJ f 29.6666666667 19.7765532802 68.6738709669 -9.3405376336
CC036/UncJ m 34.6666666667 19.7765532802 73.6738709669 -4.3405376336
CC037/TauUncJ f 50.0 24.2212322038 97.7738734141 2.2261265859
CC037/TauUncJ m 34.3333333333 19.7765532802 73.3405376336 -4.6738709669
CC040/TauUncJ f 33.3333333333 19.7765532802 72.3405376336 -5.6738709669
CC040/TauUncJ m 106.0 19.7765532802 145.0072043003 66.9927956997
CC041/TauUncJ f 48.0 19.7765532802 87.0072043003 8.9927956997
CC041/TauUncJ m 41.5 24.2212322038 89.2738734141 -6.2738734141
CC043/GeniUncJ f 72.5 24.2212322038 120.2738734141 24.7261265859
CC043/GeniUncJ m 87.5 24.2212322038 135.2738734141 39.7261265859
CC057/UncJ f 32.5 24.2212322038 80.2738734141 -15.2738734141
CC057/UncJ m 49.0 24.2212322038 96.7738734141 1.2261265859
CC059/TauUncJ f 76.5 17.12699754 110.2812298547 42.7187701453
CC059/TauUncJ m 86.8 15.3188523 117.0148505274 56.5851494726
CC061/GeniUncJ f 64.3333333333 19.7765532802 103.3405376336 25.3261290331
CC061/GeniUncJ m 113.0 24.2212322038 160.7738734141 65.2261265859
CC078/TauUncJ f 62.0 19.7765532802 101.0072043003 22.9927956997
CC078/TauUncJ m 57.0 19.7765532802 96.0072043003 17.9927956997
CC084/TauJ f 81.0 24.2212322038 128.7738734141 33.2261265859
CC084/TauJ m 42.0 24.2212322038 89.7738734141 -5.7738734141
NOD/ShiLtJ f 40.75 12.1106161019 64.636936707 16.863063293
NOD/ShiLtJ m 57.1818181818 10.3279681137 77.5526662518 36.8109701119
NZO/HlLtJ f 47.6666666667 19.7765532802 86.6738709669 8.6594623664
NZO/HlLtJ m 44.0 24.2212322038 91.7738734141 -3.7738734141
PWK/PhJ f 71.2222222222 11.41799836 93.7430421253 48.7014023191
PWK/PhJ m 71.0 12.1106161019 94.886936707 47.113063293
WSB/EiJ f 56.5 12.1106161019 80.386936707 32.613063293
WSB/EiJ m 49.3333333333 13.984134933 76.9155920092 21.7510746575


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 36.2083333333 13.0809604424 62.0091738129 10.4074928537
A/J both 57.45 10.3709120333 77.9055505063 36.9944494937
C57BL/6J both 61.5422077922 6.9006639613 75.1530531772 47.9313624073
CAST/EiJ both 71.3125 8.124048256 87.3363442754 55.2886557246
CC001/UncJ both 62.5833333333 15.6347381583 93.4212360194 31.7454306472
CC002/UncJ both 61.125 12.1106161019 85.011936707 37.238063293
CC003/UncJ both 110.3333333333 15.6347381583 141.1712360194 79.4954306472
CC005/TauUncJ both 47.3333333333 15.6347381583 78.1712360194 16.4954306472
CC006/TauUncJ both 43.0 17.12699754 76.7812298547 9.2187701453
CC009/UncJ both 63.25 17.12699754 97.0312298547 29.4687701453
CC011/UncJ both 42.0 13.984134933 69.5822586759 14.4177413241
CC013/GeniUncJ both 40.0 17.12699754 73.7812298547 6.2187701453
CC016/GeniUncJ both 53.5 13.0809604424 79.3008404796 27.6991595204
CC017/UncJ both 62.25 15.6347381583 93.0879026861 31.4120973139
CC018/UncJ both 57.75 15.6347381583 88.5879026861 26.9120973139
CC019/TauUncJ both 77.625 12.1106161019 101.511936707 53.738063293
CC025/GeniUncJ both 47.6666666667 13.984134933 75.2489253425 20.0844079908
CC027/GeniUncJ both 60.75 14.8324149602 90.0054032252 31.4945967748
CC028/GeniUncJ both 53.0 13.984134933 80.5822586759 25.4177413241
CC030/GeniUncJ both 57.0 17.12699754 90.7812298547 23.2187701453
CC033/GeniUncJ both 62.5 17.12699754 96.2812298547 28.7187701453
CC036/UncJ both 32.1666666667 13.984134933 59.7489253425 4.5844079908
CC037/TauUncJ both 42.1666666667 15.6347381583 73.0045693528 11.3287639806
CC040/TauUncJ both 69.6666666667 13.984134933 97.2489253425 42.0844079908
CC041/TauUncJ both 44.75 15.6347381583 75.5879026861 13.9120973139
CC043/GeniUncJ both 80.0 17.12699754 113.7812298547 46.2187701453
CC057/UncJ both 40.75 17.12699754 74.5312298547 6.9687701453
CC059/TauUncJ both 81.65 11.489139225 104.3111378956 58.9888621044
CC061/GeniUncJ both 88.6666666667 15.6347381583 119.5045693528 57.8287639806
CC078/TauUncJ both 59.5 13.984134933 87.0822586759 31.9177413241
CC084/TauJ both 61.5 17.12699754 95.2812298547 27.7187701453
NOD/ShiLtJ both 48.9659090909 7.9582339078 64.6627017277 33.2691164541
NZO/HlLtJ both 45.8333333333 15.6347381583 76.6712360194 14.9954306472
PWK/PhJ both 71.1111111111 8.3222248966 87.525838297 54.6963839252
WSB/EiJ both 52.9166666667 9.2496358332 71.1606159301 34.6727174032




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA