Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:28989750-29968141

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ntm 9 28994750 to 29963141 968391 - protein coding gene neurotrimin
Tssr88576 9 28994786 to 28994797 11 - TSS region transcription start site region 88576
Tssr88577 9 28996054 to 28996064 10 - TSS region transcription start site region 88577
Tssr88578 9 28996065 to 28996096 31 - TSS region transcription start site region 88578
Tssr88579 9 28996097 to 28996112 15 - TSS region transcription start site region 88579
Tssr88580 9 28996206 to 28996223 17 - TSS region transcription start site region 88580
Tssr88581 9 28996279 to 28996288 9 - TSS region transcription start site region 88581
Tssr88582 9 28996392 to 28996397 5 - TSS region transcription start site region 88582
Tssr88583 9 28996500 to 28996515 15 - TSS region transcription start site region 88583
Tssr84199 9 29014045 to 29014066 21 + TSS region transcription start site region 84199
Cpgi21518 9 29014095 to 29014284 189 CpG island CpG island 21518
Gm15520 9 29059799 to 29070199 10400 + antisense lncRNA gene predicted gene 15520
Tssr88584 9 29179086 to 29179093 7 - TSS region transcription start site region 88584
D9Mit42 9 29321023 to 29321234 211 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 42
Tssr88585 9 29368231 to 29368234 3 - TSS region transcription start site region 88585
Cpgi21519 9 29411731 to 29412839 1108 CpG island CpG island 21519
Tssr88586 9 29411753 to 29411773 20 - TSS region transcription start site region 88586
Tssr88587 9 29411780 to 29411811 31 - TSS region transcription start site region 88587
Tssr88588 9 29411847 to 29411874 27 - TSS region transcription start site region 88588
Tssr88589 9 29412251 to 29412277 26 - TSS region transcription start site region 88589
Tssr88590 9 29412285 to 29412298 13 - TSS region transcription start site region 88590
Tssr88591 9 29412377 to 29412393 16 - TSS region transcription start site region 88591
Tssr88592 9 29412460 to 29412503 43 - TSS region transcription start site region 88592
Tssr88593 9 29412514 to 29412533 19 - TSS region transcription start site region 88593
Tssr88594 9 29412635 to 29412678 43 - TSS region transcription start site region 88594
Tssr84200 9 29442372 to 29442389 17 + TSS region transcription start site region 84200
Tssr84201 9 29442397 to 29442403 6 + TSS region transcription start site region 84201
Tbs2 9 29458674 to 29458818 144 QTL tuberculosis severity 2
D9Mit89 9 29458674 to 29458818 144 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 89
Tssr88595 9 29468325 to 29468327 2 - TSS region transcription start site region 88595
D9Mit138 9 29489060 to 29489180 120 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 138
D9Mit244 9 29556772 to 29556918 146 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 244
D9Mit244.2 9 29556863 to 29557002 139 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 244.2
Gm15521 9 29590484 to 29592510 2026 - sense intronic lncRNA gene predicted gene 15521
Tssr88596 9 29769330 to 29769334 4 - TSS region transcription start site region 88596
Tssr2815 9 29771503 to 29771504 1 + TSS region transcription start site region 2815
Tssr88597 9 29820950 to 29820952 2 - TSS region transcription start site region 88597
Tssr88598 9 29834434 to 29834439 5 - TSS region transcription start site region 88598
Tssr88599 9 29939790 to 29939801 11 - TSS region transcription start site region 88599
Paasd1 9 29949417 to 30285916 336499 QTL peak activity after sleep deprivation 1
Cpgi21520 9 29962373 to 29962886 513 CpG island CpG island 21520
Tssr88600 9 29963035 to 29963046 11 - TSS region transcription start site region 88600
Tssr88601 9 29963092 to 29963103 11 - TSS region transcription start site region 88601
Tssr88602 9 29963112 to 29963141 29 - TSS region transcription start site region 88602
Tssr88603 9 29963145 to 29963154 9 - TSS region transcription start site region 88603
Tssr88604 9 29963205 to 29963210 5 - TSS region transcription start site region 88604