Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:25221913-26962036

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114 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm8031 9 25228447 to 25229069 622 - pseudogene predicted gene 8031
Gm29642 9 25240486 to 25245580 5094 + lincRNA gene predicted gene 29642
9130004C02Rik 9 25248127 to 25252416 4289 unclassified gene RIKEN cDNA 9130004C02 gene
Cpgi21506 9 25251672 to 25253513 1841 CpG island CpG island 21506
Tssr88528 9 25251984 to 25251997 13 - TSS region transcription start site region 88528
Tssr88529 9 25252022 to 25252084 62 - TSS region transcription start site region 88529
Tssr84122 9 25252200 to 25252233 33 + TSS region transcription start site region 84122
Tssr88530 9 25252371 to 25252387 16 - TSS region transcription start site region 88530
Tssr88531 9 25252397 to 25252415 18 - TSS region transcription start site region 88531
Sept7 9 25252439 to 25308571 56132 + protein coding gene septin 7
Tssr84123 9 25252505 to 25252516 11 + TSS region transcription start site region 84123
Tssr84124 9 25252589 to 25252591 2 + TSS region transcription start site region 84124
Tssr84125 9 25252638 to 25252659 21 + TSS region transcription start site region 84125
Tssr84126 9 25252878 to 25252900 22 + TSS region transcription start site region 84126
Tssr84127 9 25252910 to 25252930 20 + TSS region transcription start site region 84127
Tssr84128 9 25253754 to 25253769 15 + TSS region transcription start site region 84128
Tssr84129 9 25255255 to 25255280 25 + TSS region transcription start site region 84129
A1300008O04Rik 9 25259455 to 25262656 3201 unclassified gene RIKEN cDNA A1300008O04 gene
Tssr84130 9 25263177 to 25263190 13 + TSS region transcription start site region 84130
Tssr2810 9 25263207 to 25263220 13 + TSS region transcription start site region 2810
Tssr84131 9 25265407 to 25265433 26 + TSS region transcription start site region 84131
Gm48272 9 25274802 to 25275475 673 - pseudogene predicted gene, 48272
Tssr84132 9 25277552 to 25277614 62 + TSS region transcription start site region 84132
Tssr84133 9 25288244 to 25288265 21 + TSS region transcription start site region 84133
Tssr84134 9 25288272 to 25288294 22 + TSS region transcription start site region 84134
Tssr84135 9 25293676 to 25293767 91 + TSS region transcription start site region 84135
Tssr84136 9 25297802 to 25297826 24 + TSS region transcription start site region 84136
Tssr84137 9 25297827 to 25297846 19 + TSS region transcription start site region 84137
Tssr84138 9 25297875 to 25297883 8 + TSS region transcription start site region 84138
Tssr84139 9 25299480 to 25299519 39 + TSS region transcription start site region 84139
Tssr84140 9 25301465 to 25301478 13 + TSS region transcription start site region 84140
Tssr84141 9 25303733 to 25303766 33 + TSS region transcription start site region 84141
Tssr84142 9 25306179 to 25306198 19 + TSS region transcription start site region 84142
Tssr84143 9 25307791 to 25307800 9 + TSS region transcription start site region 84143
Tssr84144 9 25308031 to 25308037 6 + TSS region transcription start site region 84144
Gm18891 9 25349498 to 25351661 2163 + pseudogene predicted gene, 18891
D9Mit223 9 25365747 to 25366011 264 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 223
Gm8049 9 25450462 to 25452211 1749 + pseudogene predicted gene 8049
Cpgi21507 9 25481262 to 25482104 842 CpG island CpG island 21507
Eepd1 9 25481547 to 25604110 122563 + protein coding gene endonuclease/exonuclease/phosphatase family domain containing 1
Tssr84145 9 25481551 to 25481562 11 + TSS region transcription start site region 84145
Tssr84146 9 25481590 to 25481612 22 + TSS region transcription start site region 84146
Tssr84147 9 25481623 to 25481634 11 + TSS region transcription start site region 84147
Cpgi21508 9 25482603 to 25482807 204 CpG island CpG island 21508
Tssr84148 9 25491129 to 25491135 6 + TSS region transcription start site region 84148
Tssr84149 9 25504409 to 25504424 15 + TSS region transcription start site region 84149
Tssr84150 9 25504430 to 25504451 21 + TSS region transcription start site region 84150
Tssr84151 9 25515268 to 25515272 4 + TSS region transcription start site region 84151
Gm25861 9 25539097 to 25539205 108 - snoRNA gene predicted gene, 25861
Tssr88532 9 25541425 to 25541434 9 - TSS region transcription start site region 88532
Tssr84152 9 25562676 to 25562705 29 + TSS region transcription start site region 84152
Gm25346 9 25569678 to 25569805 127 - snoRNA gene predicted gene, 25346
Tssr84153 9 25570610 to 25570621 11 + TSS region transcription start site region 84153
Tssr84154 9 25570623 to 25570633 10 + TSS region transcription start site region 84154
Gm48330 9 25684995 to 25685363 368 - pseudogene predicted gene, 48330
Gm48331 9 25757555 to 25757825 270 + pseudogene predicted gene, 48331
Gm48337 9 25811546 to 25811747 201 - pseudogene predicted gene, 48337
Gm26190 9 25812855 to 25812975 120 - miRNA gene predicted gene, 26190
Gm48362 9 25855315 to 25859652 4337 - lincRNA gene predicted gene, 48362
Gm39312 9 26029562 to 26032713 3151 - lincRNA gene predicted gene, 39312
D9Mit221 9 26091913 to 26092036 123 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 221
Gm19113 9 26366831 to 26368658 1827 - pseudogene predicted gene, 19113
Gm48373 9 26386019 to 26386302 283 - pseudogene predicted gene, 48373
Gm30313 9 26519485 to 26549953 30468 - lincRNA gene predicted gene, 30313
D9Mit204 9 26533699 to 26533838 139 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 204
Gm48393 9 26719838 to 26731861 12023 - lincRNA gene predicted gene, 48393
Cpgi21509 9 26733220 to 26734582 1362 CpG island CpG island 21509
Tssr84155 9 26733743 to 26733815 72 + TSS region transcription start site region 84155
B3gat1 9 26733783 to 26761350 27567 + protein coding gene beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
Tssr84156 9 26733845 to 26733856 11 + TSS region transcription start site region 84156
Cpgi21510 9 26755501 to 26756138 637 CpG island CpG island 21510
Tssr2811 9 26760383 to 26760392 9 + TSS region transcription start site region 2811
Glb1l2 9 26763044 to 26806468 43424 - protein coding gene galactosidase, beta 1-like 2
Tssr88533 9 26791881 to 26791886 5 - TSS region transcription start site region 88533
Tssr88534 9 26791891 to 26791920 29 - TSS region transcription start site region 88534
Tssr88535 9 26791925 to 26791928 3 - TSS region transcription start site region 88535
Tssr88536 9 26791940 to 26791943 3 - TSS region transcription start site region 88536
Tssr2812 9 26792000 to 26792002 2 - TSS region transcription start site region 2812
Tssr88537 9 26802563 to 26802590 27 - TSS region transcription start site region 88537
Tssr88538 9 26802599 to 26802606 7 - TSS region transcription start site region 88538
Tssr88539 9 26803629 to 26803642 13 - TSS region transcription start site region 88539
Tssr88540 9 26803661 to 26803668 7 - TSS region transcription start site region 88540
Tssr88541 9 26804445 to 26804457 12 - TSS region transcription start site region 88541
Tssr88542 9 26804485 to 26804492 7 - TSS region transcription start site region 88542
Cpgi21511 9 26806277 to 26806706 429 CpG island CpG island 21511
Tssr88543 9 26806384 to 26806461 77 - TSS region transcription start site region 88543
Glb1l3 9 26817953 to 26860890 42937 - protein coding gene galactosidase, beta 1 like 3
Tssr88544 9 26829488 to 26829496 8 - TSS region transcription start site region 88544
Tssr88545 9 26829510 to 26829525 15 - TSS region transcription start site region 88545
Tssr88546 9 26829528 to 26829538 10 - TSS region transcription start site region 88546
Tssr88547 9 26860623 to 26860639 16 - TSS region transcription start site region 88547
Tssr88548 9 26860649 to 26860697 48 - TSS region transcription start site region 88548
Tssr88549 9 26860849 to 26860868 19 - TSS region transcription start site region 88549
Tssr88550 9 26860878 to 26860894 16 - TSS region transcription start site region 88550
Tssr88551 9 26860901 to 26860912 11 - TSS region transcription start site region 88551
Tssr88552 9 26861956 to 26861972 16 - TSS region transcription start site region 88552
Tssr88553 9 26862001 to 26862008 7 - TSS region transcription start site region 88553
Gm1110 9 26879567 to 26923111 43544 - protein coding gene predicted gene 1110
Tssr84157 9 26879677 to 26879682 5 + TSS region transcription start site region 84157
Tssr88554 9 26880572 to 26880574 2 - TSS region transcription start site region 88554
Tssr88555 9 26889085 to 26889087 2 - TSS region transcription start site region 88555
Tssr88556 9 26896994 to 26896997 3 - TSS region transcription start site region 88556
Tssr88557 9 26911815 to 26911819 4 - TSS region transcription start site region 88557
Tssr88558 9 26917188 to 26917191 3 - TSS region transcription start site region 88558
Tssr88559 9 26920090 to 26920096 6 - TSS region transcription start site region 88559
Tssr88560 9 26920875 to 26920880 5 - TSS region transcription start site region 88560
Tssr88561 9 26923040 to 26923051 11 - TSS region transcription start site region 88561
Tssr88562 9 26923060 to 26923086 26 - TSS region transcription start site region 88562
Tssr88563 9 26923092 to 26923095 3 - TSS region transcription start site region 88563
Tssr88564 9 26923133 to 26923148 15 - TSS region transcription start site region 88564
Tssr2813 9 26923192 to 26923196 4 - TSS region transcription start site region 2813
Tssr88565 9 26924186 to 26924195 9 - TSS region transcription start site region 88565
Tssr84158 9 26924460 to 26924500 40 + TSS region transcription start site region 84158
Gm5120 9 26960149 to 26962559 2410 - pseudogene predicted gene 5120