Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:121660045-121725490

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vipr1 9 121642716 to 121672954 30238 + protein coding gene vasoactive intestinal peptide receptor 1
Cpgi22519 9 121669266 to 121669872 606 CpG island CpG island 22519
Tssr92056 9 121675102 to 121675112 10 - TSS region transcription start site region 92056
Tssr87794 9 121675188 to 121675229 41 + TSS region transcription start site region 87794
Tssr87795 9 121675243 to 121675259 16 + TSS region transcription start site region 87795
Sec22c 9 121680045 to 121705490 25445 - protein coding gene SEC22 homolog C, vesicle trafficking protein
D9Ertd788e 9 121689692 to 121689897 205 DNA segment DNA segment, Chr 9, ERATO Doi 788, expressed
Cpgi22520 9 121704377 to 121705621 1244 CpG island CpG island 22520
Tssr92057 9 121704686 to 121704700 14 - TSS region transcription start site region 92057
Tssr92058 9 121704996 to 121705041 45 - TSS region transcription start site region 92058
Tssr87796 9 121705103 to 121705120 17 + TSS region transcription start site region 87796
Tssr92059 9 121705296 to 121705322 26 - TSS region transcription start site region 92059
Tssr92060 9 121705348 to 121705364 16 - TSS region transcription start site region 92060
Tssr92061 9 121705522 to 121705539 17 - TSS region transcription start site region 92061
Tssr92062 9 121706368 to 121706388 20 - TSS region transcription start site region 92062
Tssr87797 9 121706797 to 121706799 2 + TSS region transcription start site region 87797
Tssr87798 9 121707998 to 121708001 3 + TSS region transcription start site region 87798
Cpgi22521 9 121710162 to 121710875 713 CpG island CpG island 22521
Tssr87799 9 121710346 to 121710361 15 + TSS region transcription start site region 87799
Tssr87800 9 121710370 to 121710375 5 + TSS region transcription start site region 87800
Tssr87801 9 121710378 to 121710386 8 + TSS region transcription start site region 87801
Tssr87802 9 121710389 to 121710422 33 + TSS region transcription start site region 87802
Ss18l2 9 121710389 to 121712921 2532 + protein coding gene SS18, nBAF chromatin remodeling complex subunit like 2
Tssr87803 9 121710447 to 121710456 9 + TSS region transcription start site region 87803
Tssr87804 9 121710486 to 121710493 7 + TSS region transcription start site region 87804
Cpgi22522 9 121718670 to 121720344 1674 CpG island CpG island 22522
Tssr92063 9 121718858 to 121718892 34 - TSS region transcription start site region 92063
Tssr92064 9 121718927 to 121719013 86 - TSS region transcription start site region 92064
Tssr87805 9 121719124 to 121719137 13 + TSS region transcription start site region 87805
Tssr87806 9 121719154 to 121719166 12 + TSS region transcription start site region 87806
Nktr 9 121719169 to 121756843 37674 + protein coding gene natural killer tumor recognition sequence
Tssr87807 9 121719172 to 121719278 106 + TSS region transcription start site region 87807
Tssr87808 9 121719287 to 121719305 18 + TSS region transcription start site region 87808
Tssr87809 9 121719403 to 121719471 68 + TSS region transcription start site region 87809
Tssr87810 9 121719842 to 121719846 4 + TSS region transcription start site region 87810
Tssr92065 9 121720088 to 121720093 5 - TSS region transcription start site region 92065
Tssr87811 9 121720566 to 121720569 3 + TSS region transcription start site region 87811