Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:95805920-95883539

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cnot1 8 95719451 to 95807464 88013 - protein coding gene CCR4-NOT transcription complex, subunit 1
Cpgi20882 8 95806500 to 95808204 1704 CpG island CpG island 20882
4930513N10Rik 8 95806830 to 95821728 14898 + antisense lncRNA gene RIKEN cDNA 4930513N10 gene
Tssr79006 8 95806969 to 95806986 17 + TSS region transcription start site region 79006
Tssr79007 8 95806991 to 95807018 27 + TSS region transcription start site region 79007
Tssr82560 8 95807390 to 95807399 9 - TSS region transcription start site region 82560
Tssr82561 8 95807416 to 95807453 37 - TSS region transcription start site region 82561
Tssr82562 8 95807458 to 95807471 13 - TSS region transcription start site region 82562
Tssr82563 8 95808061 to 95808076 15 - TSS region transcription start site region 82563
Gm31659 8 95808552 to 95818274 9722 - lincRNA gene predicted gene, 31659
Tssr82564 8 95817680 to 95817703 23 - TSS region transcription start site region 82564
Tssr82565 8 95818264 to 95818281 17 - TSS region transcription start site region 82565
Cpgi20883 8 95825330 to 95825506 176 CpG island CpG island 20883
Sap18b 8 95825346 to 95826134 788 + protein coding gene Sin3-associated polypeptide 18B
Tssr79008 8 95825353 to 95825354 1 + TSS region transcription start site region 79008
Gm31805 8 95828598 to 95833675 5077 - lincRNA gene predicted gene, 31805
Slc38a7 8 95835920 to 95853539 17619 - protein coding gene solute carrier family 38, member 7
Cpgi20884 8 95848258 to 95848641 383 CpG island CpG island 20884
Cpgi20885 8 95853259 to 95853520 261 CpG island CpG island 20885
Tssr82566 8 95853501 to 95853530 29 - TSS region transcription start site region 82566
Got2 8 95864137 to 95888365 24228 - protein coding gene glutamatic-oxaloacetic transaminase 2, mitochondrial
Tssr82567 8 95864757 to 95864796 39 - TSS region transcription start site region 82567
Gm45760 8 95870814 to 95872595 1781 + unclassified gene predicted gene 45760