Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:95680101-96530106

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ndrg4 8 95676985 to 95715119 38134 + protein coding gene N-myc downstream regulated gene 4
Cpgi20880 8 95702617 to 95703370 753 CpG island CpG island 20880
Tssr79001 8 95703047 to 95703063 16 + TSS region transcription start site region 79001
Tssr79002 8 95713347 to 95713364 17 + TSS region transcription start site region 79002
Tssr79003 8 95713521 to 95713536 15 + TSS region transcription start site region 79003
Tssr2669 8 95713943 to 95713958 15 + TSS region transcription start site region 2669
Tssr79004 8 95714607 to 95714622 15 + TSS region transcription start site region 79004
Cpgi20881 8 95715662 to 95716793 1131 CpG island CpG island 20881
Setd6 8 95715881 to 95719010 3129 + protein coding gene SET domain containing 6
Tssr79005 8 95715901 to 95715932 31 + TSS region transcription start site region 79005
Cnot1 8 95719451 to 95807464 88013 - protein coding gene CCR4-NOT transcription complex, subunit 1
Gm46062 8 95721645 to 95723031 1386 + pseudogene predicted gene, 46062
Tssr82556 8 95735147 to 95735148 1 - TSS region transcription start site region 82556
Tssr82557 8 95740726 to 95740730 4 - TSS region transcription start site region 82557
Tssr82558 8 95744626 to 95744639 13 - TSS region transcription start site region 82558
Gm26493 8 95746060 to 95746195 135 - snoRNA gene predicted gene, 26493
Mir7073 8 95753151 to 95753214 63 - miRNA gene microRNA 7073
Gm26265 8 95756950 to 95757082 132 - snoRNA gene predicted gene, 26265
Gm45762 8 95775912 to 95778530 2618 - unclassified gene predicted gene 45762
Tssr82559 8 95788736 to 95788767 31 - TSS region transcription start site region 82559
Cpgi20882 8 95806500 to 95808204 1704 CpG island CpG island 20882
4930513N10Rik 8 95806830 to 95821728 14898 + antisense lncRNA gene RIKEN cDNA 4930513N10 gene
Tssr79006 8 95806969 to 95806986 17 + TSS region transcription start site region 79006
Tssr79007 8 95806991 to 95807018 27 + TSS region transcription start site region 79007
Tssr82560 8 95807390 to 95807399 9 - TSS region transcription start site region 82560
Tssr82561 8 95807416 to 95807453 37 - TSS region transcription start site region 82561
Tssr82562 8 95807458 to 95807471 13 - TSS region transcription start site region 82562
Tssr82563 8 95808061 to 95808076 15 - TSS region transcription start site region 82563
Gm31659 8 95808552 to 95818274 9722 - lincRNA gene predicted gene, 31659
Tssr82564 8 95817680 to 95817703 23 - TSS region transcription start site region 82564
Tssr82565 8 95818264 to 95818281 17 - TSS region transcription start site region 82565
Cpgi20883 8 95825330 to 95825506 176 CpG island CpG island 20883
Sap18b 8 95825346 to 95826134 788 + protein coding gene Sin3-associated polypeptide 18B
Tssr79008 8 95825353 to 95825354 1 + TSS region transcription start site region 79008
Gm31805 8 95828598 to 95833675 5077 - lincRNA gene predicted gene, 31805
Slc38a7 8 95835920 to 95853539 17619 - protein coding gene solute carrier family 38, member 7
Cpgi20884 8 95848258 to 95848641 383 CpG island CpG island 20884
Cpgi20885 8 95853259 to 95853520 261 CpG island CpG island 20885
Tssr82566 8 95853501 to 95853530 29 - TSS region transcription start site region 82566
Got2 8 95864137 to 95888365 24228 - protein coding gene glutamatic-oxaloacetic transaminase 2, mitochondrial
Tssr82567 8 95864757 to 95864796 39 - TSS region transcription start site region 82567
Gm45760 8 95870814 to 95872595 1781 + unclassified gene predicted gene 45760
Cpgi20886 8 95887557 to 95888670 1113 CpG island CpG island 20886
Tssr82568 8 95888364 to 95888375 11 - TSS region transcription start site region 82568
Tssr82569 8 95888377 to 95888415 38 - TSS region transcription start site region 82569
Tssr82570 8 95888510 to 95888520 10 - TSS region transcription start site region 82570
Gm45895 8 95910574 to 95934042 23468 + lincRNA gene predicted gene 45895
Gm8637 8 95921529 to 95922613 1084 + pseudogene predicted gene 8637
Cpgi20887 8 95951953 to 95952155 202 CpG island CpG island 20887
D8Dcr28 8 95967333 to 95967448 115 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 28
Gm31892 8 96007041 to 96010702 3661 + lncRNA gene predicted gene, 31892
D8Mit33 8 96082178 to 96082403 225 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 33
Char2 8 96082178 to 96082403 225 QTL P. chabaudi malaria resistance QTL 2
Tssr79009 8 96105101 to 96105106 5 + TSS region transcription start site region 79009
Cpgi20888 8 96151093 to 96151262 169 CpG island CpG island 20888
D8Mit11 8 96295315 to 96295531 216 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 11
Gm32005 8 96309519 to 96361523 52004 + lincRNA gene predicted gene, 32005
Gm22780 8 96318487 to 96318618 131 - snoRNA gene predicted gene, 22780
Gm32122 8 96371727 to 96403862 32135 - lincRNA gene predicted gene, 32122
Tssr82571 8 96403858 to 96403872 14 - TSS region transcription start site region 82571
Tssr82572 8 96403880 to 96403892 12 - TSS region transcription start site region 82572
Tssr82573 8 96403900 to 96403905 5 - TSS region transcription start site region 82573
Tssr79010 8 96452966 to 96452972 6 + TSS region transcription start site region 79010
1700047G07Rik 8 96512340 to 96513979 1639 + lincRNA gene RIKEN cDNA 1700047G07 gene