Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:93955681-94355813

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99 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Q 8 68123250 to 94173804 26050554 heritable phenotypic marker quinky
Gnao1 8 93810561 to 93969388 158827 + protein coding gene guanine nucleotide binding protein, alpha O
Tssr78806 8 93963267 to 93963279 12 + TSS region transcription start site region 78806
Tssr78807 8 93963483 to 93963499 16 + TSS region transcription start site region 78807
Tssr78808 8 93966863 to 93966877 14 + TSS region transcription start site region 78808
Tssr78809 8 93967033 to 93967054 21 + TSS region transcription start site region 78809
Tssr78810 8 93968855 to 93968895 40 + TSS region transcription start site region 78810
Tssr78811 8 93968936 to 93968953 17 + TSS region transcription start site region 78811
Tssr78812 8 93969117 to 93969154 37 + TSS region transcription start site region 78812
Tssr78813 8 93969166 to 93969184 18 + TSS region transcription start site region 78813
Amfr 8 93971588 to 94012640 41052 - protein coding gene autocrine motility factor receptor
Tssr82472 8 93972103 to 93972107 4 - TSS region transcription start site region 82472
Tssr78814 8 94010483 to 94010490 7 + TSS region transcription start site region 78814
Tssr78815 8 94010514 to 94010548 34 + TSS region transcription start site region 78815
Cpgi20834 8 94011579 to 94013101 1522 CpG island CpG island 20834
Tssr82473 8 94012120 to 94012141 21 - TSS region transcription start site region 82473
Tssr82474 8 94012537 to 94012554 17 - TSS region transcription start site region 82474
Tssr82475 8 94012558 to 94012687 129 - TSS region transcription start site region 82475
Tssr82476 8 94012841 to 94012851 10 - TSS region transcription start site region 82476
Nudt21 8 94019403 to 94037039 17636 - protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 21
D8Ertd575e 8 94031603 to 94031824 221 DNA segment DNA segment, Chr 8, ERATO Doi 575, expressed
Cpgi20835 8 94036589 to 94037933 1344 CpG island CpG island 20835
Tssr82477 8 94037007 to 94037027 20 - TSS region transcription start site region 82477
Tssr82478 8 94037035 to 94037046 11 - TSS region transcription start site region 82478
Ogfod1 8 94037198 to 94067921 30723 + protein coding gene 2-oxoglutarate and iron-dependent oxygenase domain containing 1
Tssr78816 8 94037221 to 94037288 67 + TSS region transcription start site region 78816
Gm45873 8 94048781 to 94050695 1914 + unclassified gene predicted gene 45873
Bbs2 8 94067954 to 94098928 30974 - protein coding gene Bardet-Biedl syndrome 2 (human)
Tssr82479 8 94070206 to 94070248 42 - TSS region transcription start site region 82479
D8Mit209 8 94097044 to 94097187 143 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 209
Cpgi20836 8 94098138 to 94098879 741 CpG island CpG island 20836
Tssr82480 8 94098342 to 94098388 46 - TSS region transcription start site region 82480
Tssr82481 8 94098431 to 94098442 11 - TSS region transcription start site region 82481
Tssr82482 8 94098490 to 94098534 44 - TSS region transcription start site region 82482
Gm39226 8 94099542 to 94100572 1030 + lncRNA gene predicted gene, 39226
Tssr2647 8 94102277 to 94102284 7 + TSS region transcription start site region 2647
Tssr78817 8 94137197 to 94137213 16 + TSS region transcription start site region 78817
Mt4 8 94137204 to 94139031 1827 + protein coding gene metallothionein 4
Cpgi20837 8 94152483 to 94152926 443 CpG island CpG island 20837
Mt3 8 94152607 to 94154146 1539 + protein coding gene metallothionein 3
Tssr78818 8 94152735 to 94152751 16 + TSS region transcription start site region 78818
Tssr78819 8 94152992 to 94153004 12 + TSS region transcription start site region 78819
Tssr78820 8 94153022 to 94153033 11 + TSS region transcription start site region 78820
Tssr78821 8 94153895 to 94153911 16 + TSS region transcription start site region 78821
Tssr82483 8 94153951 to 94153992 41 - TSS region transcription start site region 82483
Tssr82484 8 94154006 to 94154021 15 - TSS region transcription start site region 82484
Tssr82485 8 94154144 to 94154146 2 - TSS region transcription start site region 82485
D8Jpk2 8 94155681 to 94155813 132 DNA segment DNA segment, Chr 8, Japan, Kominami 2
Gm39227 8 94166124 to 94172524 6400 - lncRNA gene predicted gene, 39227
Gm45774 8 94170748 to 94173412 2664 - antisense lncRNA gene predicted gene 45774
Cpgi20838 8 94172065 to 94173330 1265 CpG island CpG island 20838
Mt2 8 94172664 to 94173568 904 + protein coding gene metallothionein 2
Tssr78822 8 94172774 to 94172792 18 + TSS region transcription start site region 78822
Tssr78823 8 94173353 to 94173394 41 + TSS region transcription start site region 78823
Tssr82486 8 94173464 to 94173494 30 - TSS region transcription start site region 82486
D8Mit15 8 94173625 to 94173804 179 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 15
Tssr82487 8 94178765 to 94178803 38 - TSS region transcription start site region 82487
Cpgi20839 8 94178799 to 94179550 751 CpG island CpG island 20839
Mt1 8 94179084 to 94180327 1243 + protein coding gene metallothionein 1
Tssr78824 8 94179234 to 94179248 14 + TSS region transcription start site region 78824
Tssr78825 8 94179805 to 94179861 56 + TSS region transcription start site region 78825
Tssr78826 8 94180077 to 94180084 7 + TSS region transcription start site region 78826
Tssr78827 8 94180093 to 94180203 110 + TSS region transcription start site region 78827
Tssr82488 8 94180154 to 94180165 11 - TSS region transcription start site region 82488
Cpgi20840 8 94180168 to 94180357 189 CpG island CpG island 20840
Tssr78828 8 94180217 to 94180256 39 + TSS region transcription start site region 78828
Tssr82489 8 94180226 to 94180255 29 - TSS region transcription start site region 82489
Tssr82490 8 94180257 to 94180291 34 - TSS region transcription start site region 82490
Tssr82491 8 94180318 to 94180326 8 - TSS region transcription start site region 82491
Cpgi20841 8 94183265 to 94183520 255 CpG island CpG island 20841
Gm39228 8 94183289 to 94184969 1680 + lincRNA gene predicted gene, 39228
Cpgi20842 8 94186577 to 94186856 279 CpG island CpG island 20842
Cpgi20843 8 94191297 to 94191488 191 CpG island CpG island 20843
Tssr82492 8 94194805 to 94194811 6 - TSS region transcription start site region 82492
Cpgi20844 8 94214249 to 94215136 887 CpG island CpG island 20844
Nup93 8 94214540 to 94315066 100526 + protein coding gene nucleoporin 93
Tssr78829 8 94214547 to 94214558 11 + TSS region transcription start site region 78829
Tssr78830 8 94214567 to 94214608 41 + TSS region transcription start site region 78830
Tssr78831 8 94222947 to 94222949 2 + TSS region transcription start site region 78831
Rpl10-ps5 8 94222993 to 94223634 641 + pseudogene ribosomal protein L10, pseudogene 5
Tssr78832 8 94227534 to 94227611 77 + TSS region transcription start site region 78832
Tssr78833 8 94227652 to 94227673 21 + TSS region transcription start site region 78833
Tssr78834 8 94266825 to 94266838 13 + TSS region transcription start site region 78834
Tssr78835 8 94267086 to 94267101 15 + TSS region transcription start site region 78835
Tssr78836 8 94267105 to 94267151 46 + TSS region transcription start site region 78836
Gm45804 8 94273426 to 94276860 3434 + unclassified gene predicted gene 45804
C78859 8 94322158 to 94328100 5942 + lincRNA gene expressed sequence C78859
Mir138-2 8 94324311 to 94324381 70 + miRNA gene microRNA 138-2
Slc12a3 8 94329201 to 94366214 37013 + protein coding gene solute carrier family 12, member 3
Tssr78837 8 94329201 to 94329217 16 + TSS region transcription start site region 78837
Tssr78838 8 94329626 to 94329653 27 + TSS region transcription start site region 78838
Tssr2648 8 94340520 to 94340531 11 + TSS region transcription start site region 2648
Tssr2649 8 94340562 to 94340570 8 + TSS region transcription start site region 2649
Tssr78839 8 94347406 to 94347419 13 + TSS region transcription start site region 78839
Tssr78840 8 94354996 to 94355003 7 + TSS region transcription start site region 78840
Tssr78841 8 94355046 to 94355089 43 + TSS region transcription start site region 78841
Tssr2650 8 94355159 to 94355168 9 + TSS region transcription start site region 2650
Tssr2651 8 94355192 to 94355195 3 + TSS region transcription start site region 2651
Tssr78842 8 94355797 to 94355799 2 + TSS region transcription start site region 78842