MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:87035370-87315374

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi20769	8	87037772 to 87038547	775		CpG island	CpG island 20769
Tssr78589	8	87047689 to 87047714	25	+	TSS region	transcription start site region 78589
Rps13-ps1	8	87047694 to 87048215	521	+	pseudogene	ribosomal protein S13, pseudogene 1
Gm18602	8	87051397 to 87052247	850	-	pseudogene	predicted gene, 18602
Gm5118	8	87093307 to 87100987	7680	+	lincRNA gene	predicted gene 5118
D8Mit348	8	87098639 to 87098837	198		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 348
Tssr78590	8	87101716 to 87101723	7	+	TSS region	transcription start site region 78590
Gm34025	8	87143147 to 87146335	3188	-	lncRNA gene	predicted gene, 34025
Gm27246	8	87167735 to 87188911	21176	+	lincRNA gene	predicted gene 27246
Gm10637	8	87169747 to 87199850	30103	-	lincRNA gene	predicted gene 10637
Tssr78591	8	87175370 to 87175374	4	+	TSS region	transcription start site region 78591
Gm39216	8	87196212 to 87198404	2192	+	lncRNA gene	predicted gene, 39216
Gm27169	8	87203026 to 87293504	90478	+	lincRNA gene	predicted gene 27169
Tssr78592	8	87218572 to 87218591	19	+	TSS region	transcription start site region 78592
Tssr82307	8	87233404 to 87233405	1	-	TSS region	transcription start site region 82307
Gm18975	8	87241585 to 87242303	718	-	pseudogene	predicted gene, 18975
Imraq2	8	87305375 to 87305495	120		QTL	immune response to AAV2 QTL 2
Fcsa2	8	87305375 to 87305495	120		QTL	femoral cross-sectional area 2
D8Mit45	8	87305375 to 87305495	120		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 45