Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:84206530-84307640

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mir23a 8 84208518 to 84208592 74 + miRNA gene microRNA 23a
Mirc11 8 84208518 to 84208921 403 complex/cluster/region microRNA cluster 11, including Mir23a through Mir24-2
Mir27a 8 84208672 to 84208758 86 + miRNA gene microRNA 27a
Mir24-2 8 84208815 to 84208921 106 + miRNA gene microRNA 24-2
Mir3074-2 8 84208825 to 84208907 82 - miRNA gene microRNA 3074-2
Tssr78378 8 84208893 to 84208902 9 + TSS region transcription start site region 78378
Gm26532 8 84208920 to 84209609 689 + lincRNA gene predicted gene, 26532
Cpgi20685 8 84210016 to 84210610 594 CpG island CpG island 20685
Zswim4 8 84210942 to 84237042 26100 - protein coding gene zinc finger SWIM-type containing 4
D8Mit264 8 84220392 to 84220514 122 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 264
nmf242 8 84220392 to 92685497 8465105 heritable phenotypic marker neuroscience mutagenesis facility, 242
Tssr82092 8 84223445 to 84223462 17 - TSS region transcription start site region 82092
Gm32760 8 84235112 to 84238340 3228 + lncRNA gene predicted gene, 32760
Cpgi20686 8 84236470 to 84237596 1126 CpG island CpG island 20686
Tssr2625 8 84237008 to 84237014 6 - TSS region transcription start site region 2625
Tssr82093 8 84237046 to 84237061 15 - TSS region transcription start site region 82093
Tssr78379 8 84237312 to 84237331 19 + TSS region transcription start site region 78379
D8Ertd738e 8 84246238 to 84249719 3481 - protein coding gene DNA segment, Chr 8, ERATO Doi 738, expressed
Cpgi20687 8 84249242 to 84249886 644 CpG island CpG island 20687
Tssr82094 8 84249630 to 84249641 11 - TSS region transcription start site region 82094
Tssr82095 8 84249666 to 84249681 15 - TSS region transcription start site region 82095
Tssr82096 8 84249701 to 84249733 32 - TSS region transcription start site region 82096
Mri1 8 84250576 to 84257324 6748 - protein coding gene methylthioribose-1-phosphate isomerase 1
Cpgi20688 8 84256530 to 84257640 1110 CpG island CpG island 20688
Tssr82097 8 84257262 to 84257301 39 - TSS region transcription start site region 82097
Tssr82098 8 84257311 to 84257325 14 - TSS region transcription start site region 82098
Ccdc130 8 84257795 to 84270380 12585 - protein coding gene coiled-coil domain containing 130
Cpgi20689 8 84270065 to 84270671 606 CpG island CpG island 20689
Tssr82099 8 84270358 to 84270405 47 - TSS region transcription start site region 82099
Gm18677 8 84280876 to 84281604 728 - pseudogene predicted gene, 18677
Gm45608 8 84302963 to 84303733 770 - pseudogene predicted gene 45608