Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:72529283-77909298

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302 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acigg8 8 61221786 to 75127057 13905271 QTL anti COL7 IgG2b antibody 8
Med26 8 72494561 to 72548270 53709 - protein coding gene mediator complex subunit 26
Tssr77989 8 72530969 to 72531003 34 + TSS region transcription start site region 77989
Gm35857 8 72531031 to 72531208 177 + pseudogene predicted gene, 35857
Gm28019 8 72541480 to 72541580 100 - miRNA gene predicted gene, 28019
Carg3 8 72545028 to 72545028 0 QTL Candida albicans resistance gene 3
Cpgi20589 8 72547452 to 72549261 1809 CpG island CpG island 20589
Tssr81800 8 72548224 to 72548287 63 - TSS region transcription start site region 81800
Tssr81801 8 72548345 to 72548354 9 - TSS region transcription start site region 81801
Tssr77990 8 72548394 to 72548424 30 + TSS region transcription start site region 77990
Gm46042 8 72548406 to 72559318 10912 + lncRNA gene predicted gene, 46042
1700085D22Rik 8 72548415 to 72551682 3267 unclassified gene RIKEN cDNA 1700085D22 gene
Tssr77991 8 72548459 to 72548470 11 + TSS region transcription start site region 77991
Tssr77992 8 72548499 to 72548583 84 + TSS region transcription start site region 77992
Smim7 8 72565198 to 72571048 5850 - protein coding gene small integral membrane protein 7
Cpgi20590 8 72570634 to 72571485 851 CpG island CpG island 20590
Tssr81802 8 72571033 to 72571067 34 - TSS region transcription start site region 81802
Tssr77993 8 72571179 to 72571226 47 + TSS region transcription start site region 77993
Cpgi20591 8 72571795 to 72572629 834 CpG island CpG island 20591
Tssr77994 8 72572013 to 72572024 11 + TSS region transcription start site region 77994
Tssr77995 8 72572027 to 72572059 32 + TSS region transcription start site region 77995
Tmem38a 8 72572055 to 72587282 15227 + protein coding gene transmembrane protein 38A
Tssr77996 8 72572069 to 72572114 45 + TSS region transcription start site region 77996
Tssr77997 8 72573643 to 72573650 7 + TSS region transcription start site region 77997
Tssr77998 8 72573681 to 72573694 13 + TSS region transcription start site region 77998
Tssr77999 8 72584085 to 72584116 31 + TSS region transcription start site region 77999
Tssr78000 8 72584707 to 72584718 11 + TSS region transcription start site region 78000
Tssr78001 8 72586157 to 72586194 37 + TSS region transcription start site region 78001
Nwd1 8 72646225 to 72716880 70655 + protein coding gene NACHT and WD repeat domain containing 1
Tssr78002 8 72646420 to 72646430 10 + TSS region transcription start site region 78002
Tssr78003 8 72646441 to 72646452 11 + TSS region transcription start site region 78003
Tssr78004 8 72646500 to 72646518 18 + TSS region transcription start site region 78004
Tssr78005 8 72646574 to 72646596 22 + TSS region transcription start site region 78005
Tssr78006 8 72646616 to 72646628 12 + TSS region transcription start site region 78006
Tssr78007 8 72646645 to 72646660 15 + TSS region transcription start site region 78007
Tssr78008 8 72646679 to 72646725 46 + TSS region transcription start site region 78008
Tssr78009 8 72646728 to 72646781 53 + TSS region transcription start site region 78009
Gm26237 8 72684314 to 72684438 124 + miRNA gene predicted gene, 26237
Tssr78010 8 72687196 to 72687208 12 + TSS region transcription start site region 78010
Tssr78011 8 72688386 to 72688397 11 + TSS region transcription start site region 78011
Tssr78012 8 72688426 to 72688439 13 + TSS region transcription start site region 78012
Tssr78013 8 72688455 to 72688466 11 + TSS region transcription start site region 78013
Tssr78014 8 72688479 to 72688498 19 + TSS region transcription start site region 78014
A730056I06Rik 8 72714926 to 72717875 2949 unclassified gene RIKEN cDNA A730056I06 gene
Tssr78015 8 72720579 to 72720583 4 + TSS region transcription start site region 78015
D8Mit194 8 72722240 to 72722385 145 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 194
Cpgi20592 8 72723117 to 72724101 984 CpG island CpG island 20592
Tssr78016 8 72723281 to 72723293 12 + TSS region transcription start site region 78016
Sin3b 8 72723285 to 72758201 34916 + protein coding gene transcriptional regulator, SIN3B (yeast)
Tssr81803 8 72723901 to 72723942 41 - TSS region transcription start site region 81803
Tssr78017 8 72725600 to 72725621 21 + TSS region transcription start site region 78017
Tssr78018 8 72741724 to 72741737 13 + TSS region transcription start site region 78018
Tssr78019 8 72741800 to 72741808 8 + TSS region transcription start site region 78019
Tssr78020 8 72741863 to 72741876 13 + TSS region transcription start site region 78020
Cpgi20593 8 72749757 to 72750013 256 CpG island CpG island 20593
Cpgi20594 8 72756748 to 72757445 697 CpG island CpG island 20594
Tssr78021 8 72761868 to 72761896 28 + TSS region transcription start site region 78021
F2rl3 8 72761880 to 72763874 1994 + protein coding gene coagulation factor II (thrombin) receptor-like 3
Cpgi20595 8 72762595 to 72762849 254 CpG island CpG island 20595
D8Mit133 8 72763829 to 72763978 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 133
Gm45706 8 72765481 to 72767616 2135 - unclassified gene predicted gene 45706
Gm45705 8 72765481 to 72767614 2133 + unclassified gene predicted gene 45705
Gm39198 8 72766388 to 72784995 18607 - lncRNA gene predicted gene, 39198
Gm45704 8 72771658 to 72784333 12675 - pseudogene predicted gene 45704
Tssr2607 8 72772905 to 72772908 3 + TSS region transcription start site region 2607
Gm45791 8 72795136 to 72795487 351 - pseudogene predicted gene 45791
Large1 8 72814599 to 73353540 538941 - protein coding gene LARGE xylosyl- and glucuronyltransferase 1
Tssr81804 8 72835983 to 72836020 37 - TSS region transcription start site region 81804
D8Mit303 8 72849157 to 72849275 118 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 303
D8Mit341 8 72952849 to 72952995 146 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 341
Tssr81805 8 72988520 to 72988539 19 - TSS region transcription start site region 81805
Tssr81806 8 72998346 to 72998347 1 - TSS region transcription start site region 81806
Mir28b 8 73016512 to 73016591 79 + miRNA gene microRNA 28b
B930093H17Rik 8 73087956 to 73091175 3219 unclassified gene RIKEN cDNA B930093H17 gene
Tssr81807 8 73171728 to 73171733 5 - TSS region transcription start site region 81807
Gm22532 8 73175119 to 73175258 139 - snoRNA gene predicted gene, 22532
A730070K21Rik 8 73199257 to 73200673 1416 unclassified gene RIKEN cDNA A730070K21 gene
Tssr81808 8 73207710 to 73207714 4 - TSS region transcription start site region 81808
Tssr81809 8 73305721 to 73305741 20 - TSS region transcription start site region 81809
Tssr81810 8 73313406 to 73313431 25 - TSS region transcription start site region 81810
Cpgi20596 8 73352362 to 73354907 2545 CpG island CpG island 20596
Tssr81811 8 73353477 to 73353551 74 - TSS region transcription start site region 81811
Tssr2608 8 73353554 to 73353565 11 - TSS region transcription start site region 2608
Tssr78022 8 73383391 to 73383400 9 + TSS region transcription start site region 78022
Gm7943 8 73436571 to 73437604 1033 - pseudogene predicted gene 7943
D8Mit193 8 73438421 to 73438563 142 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 193
Gm23255 8 73641396 to 73641505 109 - miRNA gene predicted gene, 23255
Crry-ps 8 73749475 to 73750783 1308 - pseudogene complement receptor related protein, pseudogene
D8Mit1003 8 73759879 to 73759978 99 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 1003
Gm7948 8 73871693 to 73872536 843 + pseudogene predicted gene 7948
Tssr2609 8 73888375 to 73888382 7 + TSS region transcription start site region 2609
Gm45821 8 74081645 to 74093684 12039 - lincRNA gene predicted gene 45821
Gm27864 8 74270247 to 74270436 189 + miRNA gene predicted gene, 27864
Gm11033 8 74590987 to 74833947 242960 - lincRNA gene predicted gene 11033
Cpgi20597 8 74807550 to 74807769 219 CpG island CpG island 20597
D8Mit304 8 74860901 to 74861012 111 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 304
Tssr78023 8 74872692 to 74872740 48 + TSS region transcription start site region 78023
Tssr78024 8 74872751 to 74872763 12 + TSS region transcription start site region 78024
Tssr78025 8 74873127 to 74873137 10 + TSS region transcription start site region 78025
Isx 8 74873174 to 74893506 20332 + protein coding gene intestine specific homeobox
Tssr78026 8 74873196 to 74873228 32 + TSS region transcription start site region 78026
Tssr78027 8 74873270 to 74873283 13 + TSS region transcription start site region 78027
Tssr78028 8 74873291 to 74873303 12 + TSS region transcription start site region 78028
Tssr78029 8 74873593 to 74873615 22 + TSS region transcription start site region 78029
Tssr78030 8 74876348 to 74876352 4 + TSS region transcription start site region 78030
Tssr78031 8 74935738 to 74935740 2 + TSS region transcription start site region 78031
Cpgi20598 8 74993500 to 74994677 1177 CpG island CpG island 20598
Hmgxb4 8 74993518 to 75031978 38460 + protein coding gene HMG box domain containing 4
Tssr78032 8 74993659 to 74993698 39 + TSS region transcription start site region 78032
Tssr81812 8 74994265 to 74994283 18 - TSS region transcription start site region 81812
D8Mit180 8 75007384 to 75007530 146 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 180
Tssr78033 8 75015100 to 75015102 2 + TSS region transcription start site region 78033
Tssr78034 8 75016229 to 75016246 17 + TSS region transcription start site region 78034
Tssr78035 8 75016258 to 75016271 13 + TSS region transcription start site region 78035
Tssr78036 8 75016297 to 75016308 11 + TSS region transcription start site region 78036
Gm45822 8 75024097 to 75033941 9844 - antisense lncRNA gene predicted gene 45822
Tssr81813 8 75026056 to 75026059 3 - TSS region transcription start site region 81813
Cpgi20599 8 75033355 to 75034579 1224 CpG island CpG island 20599
Tssr78037 8 75033641 to 75033663 22 + TSS region transcription start site region 78037
Tssr78038 8 75033673 to 75033702 29 + TSS region transcription start site region 78038
Tom1 8 75033705 to 75070121 36416 + protein coding gene target of myb1 trafficking protein
Tssr81814 8 75034367 to 75034417 50 - TSS region transcription start site region 81814
Gm45820 8 75037434 to 75045246 7812 - antisense lncRNA gene predicted gene 45820
Tssr81815 8 75039816 to 75039824 8 - TSS region transcription start site region 81815
Tssr78039 8 75058273 to 75058284 11 + TSS region transcription start site region 78039
Tssr78040 8 75058295 to 75058320 25 + TSS region transcription start site region 78040
Tssr78041 8 75058343 to 75058357 14 + TSS region transcription start site region 78041
Tssr78042 8 75060322 to 75060333 11 + TSS region transcription start site region 78042
Tssr78043 8 75067492 to 75067520 28 + TSS region transcription start site region 78043
Gm2059 8 75079141 to 75079871 730 + pseudogene predicted gene 2059
Cpgi20600 8 75083845 to 75084084 239 CpG island CpG island 20600
Tssr81816 8 75085046 to 75085074 28 - TSS region transcription start site region 81816
Tssr81817 8 75085086 to 75085097 11 - TSS region transcription start site region 81817
Cpgi20601 8 75093496 to 75093957 461 CpG island CpG island 20601
Tssr78044 8 75093612 to 75093629 17 + TSS region transcription start site region 78044
Hmox1 8 75093621 to 75100589 6968 + protein coding gene heme oxygenase 1
Tssr78045 8 75094170 to 75094189 19 + TSS region transcription start site region 78045
Tssr78046 8 75094462 to 75094473 11 + TSS region transcription start site region 78046
Tssr78047 8 75094554 to 75094564 10 + TSS region transcription start site region 78047
Tssr78048 8 75095835 to 75095927 92 + TSS region transcription start site region 78048
Tssr78049 8 75096839 to 75096876 37 + TSS region transcription start site region 78049
Tssr78050 8 75096880 to 75096903 23 + TSS region transcription start site region 78050
Tssr81818 8 75096895 to 75096932 37 - TSS region transcription start site region 81818
Tssr78051 8 75096908 to 75096938 30 + TSS region transcription start site region 78051
Tssr78052 8 75097005 to 75097018 13 + TSS region transcription start site region 78052
Tssr78053 8 75097066 to 75097077 11 + TSS region transcription start site region 78053
Tssr78054 8 75097092 to 75097103 11 + TSS region transcription start site region 78054
Tssr78055 8 75097130 to 75097141 11 + TSS region transcription start site region 78055
Tssr78056 8 75097160 to 75097172 12 + TSS region transcription start site region 78056
Tssr78057 8 75097187 to 75097214 27 + TSS region transcription start site region 78057
Tssr78058 8 75097215 to 75097224 9 + TSS region transcription start site region 78058
Tssr78059 8 75097226 to 75097231 5 + TSS region transcription start site region 78059
Tssr78060 8 75097234 to 75097245 11 + TSS region transcription start site region 78060
Tssr78061 8 75097306 to 75097318 12 + TSS region transcription start site region 78061
Tssr78062 8 75098757 to 75098836 79 + TSS region transcription start site region 78062
Tssr81819 8 75098833 to 75098848 15 - TSS region transcription start site region 81819
Tssr78063 8 75099877 to 75099888 11 + TSS region transcription start site region 78063
Tssr78064 8 75099907 to 75099949 42 + TSS region transcription start site region 78064
Tssr78065 8 75099956 to 75099971 15 + TSS region transcription start site region 78065
Tssr78066 8 75100006 to 75100016 10 + TSS region transcription start site region 78066
Tssr78067 8 75100036 to 75100049 13 + TSS region transcription start site region 78067
Tssr78068 8 75100075 to 75100087 12 + TSS region transcription start site region 78068
Tssr78069 8 75100120 to 75100138 18 + TSS region transcription start site region 78069
Tssr78070 8 75100169 to 75100183 14 + TSS region transcription start site region 78070
Tssr78071 8 75100218 to 75100237 19 + TSS region transcription start site region 78071
Tssr78072 8 75100239 to 75100252 13 + TSS region transcription start site region 78072
Tssr78073 8 75100300 to 75100322 22 + TSS region transcription start site region 78073
Tssr78074 8 75100352 to 75100376 24 + TSS region transcription start site region 78074
Tssr78075 8 75100377 to 75100385 8 + TSS region transcription start site region 78075
Tssr78076 8 75100416 to 75100430 14 + TSS region transcription start site region 78076
Tssr78077 8 75100508 to 75100525 17 + TSS region transcription start site region 78077
Tssr81820 8 75100586 to 75100593 7 - TSS region transcription start site region 81820
Cpgi20602 8 75109132 to 75110132 1000 CpG island CpG island 20602
Tssr81821 8 75109330 to 75109373 43 - TSS region transcription start site region 81821
Tssr78078 8 75109511 to 75109522 11 + TSS region transcription start site region 78078
Tssr78079 8 75109559 to 75109601 42 + TSS region transcription start site region 78079
Mcm5 8 75109569 to 75128439 18870 + protein coding gene minichromosome maintenance complex component 5
Tssr78080 8 75117611 to 75117627 16 + TSS region transcription start site region 78080
Tssr78081 8 75126236 to 75126277 41 + TSS region transcription start site region 78081
Gm45899 8 75176458 to 75177733 1275 + lincRNA gene predicted gene 45899
Gm45903 8 75201439 to 75210042 8603 + lincRNA gene predicted gene 45903
Gf7 8 75201479 to 75201479 0 QTL gonadal fat pad weight 7
Cpgi20603 8 75212618 to 75214185 1567 CpG island CpG island 20603
Tssr78082 8 75213179 to 75213257 78 + TSS region transcription start site region 78082
Tssr78083 8 75213259 to 75213285 26 + TSS region transcription start site region 78083
Tssr78084 8 75213288 to 75213297 9 + TSS region transcription start site region 78084
Tssr78085 8 75213325 to 75213334 9 + TSS region transcription start site region 78085
Tssr78086 8 75213356 to 75213369 13 + TSS region transcription start site region 78086
Tssr78087 8 75213430 to 75213461 31 + TSS region transcription start site region 78087
Tssr78088 8 75213482 to 75213492 10 + TSS region transcription start site region 78088
Rasd2 8 75213944 to 75224113 10169 + protein coding gene RASD family, member 2
Tssr78089 8 75219283 to 75219298 15 + TSS region transcription start site region 78089
Gm9644 8 75274482 to 75275664 1182 - pseudogene predicted gene 9644
Gm45907 8 75294570 to 75294762 192 + pseudogene predicted gene 45907
Cpgi20604 8 75383703 to 75383904 201 CpG island CpG island 20604
Umpk-ps 8 75383802 to 75384628 826 + pseudogene uridine monophosphate kinase, pseudogene
Gm7984 8 75398511 to 75399048 537 + pseudogene predicted gene 7984
Gm19885 8 75401968 to 75402310 342 + pseudogene predicted gene, 19885
D8Mit28 8 75404498 to 75404616 118 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 28
Gm10358 8 75405337 to 75406537 1200 - protein coding gene predicted gene 10358