Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:71472836-71535696

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dda1 8 71469199 to 71476098 6899 + protein coding gene DET1 and DDB1 associated 1
Tssr77860 8 71474811 to 71474836 25 + TSS region transcription start site region 77860
Cpgi20533 8 71475791 to 71477254 1463 CpG island CpG island 20533
Ano8 8 71476019 to 71485963 9944 - protein coding gene anoctamin 8
Cpgi20534 8 71480349 to 71481834 1485 CpG island CpG island 20534
Cpgi20535 8 71484238 to 71484967 729 CpG island CpG island 20535
Cpgi20536 8 71485307 to 71486094 787 CpG island CpG island 20536
Tssr81712 8 71485928 to 71485943 15 - TSS region transcription start site region 81712
Tssr81713 8 71485954 to 71485981 27 - TSS region transcription start site region 81713
Tssr81714 8 71485997 to 71486035 38 - TSS region transcription start site region 81714
Tssr81715 8 71486037 to 71486056 19 - TSS region transcription start site region 81715
Tssr81716 8 71486332 to 71486339 7 - TSS region transcription start site region 81716
Cpgi20537 8 71487687 to 71488175 488 CpG island CpG island 20537
Tssr77861 8 71487843 to 71487867 24 + TSS region transcription start site region 77861
Gtpbp3 8 71487863 to 71493400 5537 + protein coding gene GTP binding protein 3
Cpgi20538 8 71488377 to 71489560 1183 CpG island CpG island 20538
Tssr77862 8 71488715 to 71488743 28 + TSS region transcription start site region 77862
Tssr77863 8 71488764 to 71488771 7 + TSS region transcription start site region 77863
Plvap 8 71497765 to 71511752 13987 - protein coding gene plasmalemma vesicle associated protein
Tssr81717 8 71498158 to 71498170 12 - TSS region transcription start site region 81717
Tssr81718 8 71498239 to 71498259 20 - TSS region transcription start site region 81718
Gm46041 8 71502836 to 71505696 2860 - protein coding gene predicted gene, 46041
Tssr81719 8 71504428 to 71504436 8 - TSS region transcription start site region 81719
Cpgi20539 8 71507294 to 71508533 1239 CpG island CpG island 20539
Tssr81720 8 71507628 to 71507640 12 - TSS region transcription start site region 81720
Tssr81721 8 71507653 to 71507741 88 - TSS region transcription start site region 81721
Tssr81722 8 71507742 to 71507766 24 - TSS region transcription start site region 81722
Cpgi20540 8 71511305 to 71511876 571 CpG island CpG island 20540
Tssr81723 8 71511735 to 71511761 26 - TSS region transcription start site region 81723
Tssr81724 8 71511762 to 71511778 16 - TSS region transcription start site region 81724
Ccdc194 8 71520120 to 71525711 5591 - protein coding gene coiled-coil domain containing 194
Cpgi20541 8 71521695 to 71522076 381 CpG island CpG island 20541
Tssr77864 8 71523520 to 71523527 7 + TSS region transcription start site region 77864
Gm7850 8 71523574 to 71524285 711 + pseudogene predicted gene 7850
Cpgi20542 8 71525317 to 71525866 549 CpG island CpG island 20542
Tssr81725 8 71525701 to 71525713 12 - TSS region transcription start site region 81725
Tssr81726 8 71525719 to 71525730 11 - TSS region transcription start site region 81726
Bst2 8 71534259 to 71537437 3178 - protein coding gene bone marrow stromal cell antigen 2
Tssr77865 8 71534263 to 71534266 3 + TSS region transcription start site region 77865
Tssr81727 8 71534299 to 71534316 17 - TSS region transcription start site region 81727
Tssr81728 8 71535471 to 71535489 18 - TSS region transcription start site region 81728