Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:70678543-70762634

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lsm4 8 70673248 to 70678752 5504 + protein coding gene LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
Cpgi20483 8 70682309 to 70682509 200 CpG island CpG island 20483
Gm39191 8 70683309 to 70692591 9282 - lncRNA gene predicted gene, 39191
Cpgi20484 8 70691853 to 70692296 443 CpG island CpG island 20484
Cpgi20485 8 70695422 to 70695680 258 CpG island CpG island 20485
Cpgi20486 8 70696539 to 70697011 472 CpG island CpG island 20486
Cpgi20487 8 70698292 to 70700323 2031 CpG island CpG island 20487
Tssr81647 8 70698317 to 70698327 10 - TSS region transcription start site region 81647
Tssr81648 8 70698334 to 70698364 30 - TSS region transcription start site region 81648
Tssr77799 8 70698526 to 70698545 19 + TSS region transcription start site region 77799
Tssr77800 8 70698931 to 70698945 14 + TSS region transcription start site region 77800
Jund 8 70698949 to 70700616 1667 + protein coding gene jun D proto-oncogene
Tssr2600 8 70699154 to 70699161 7 + TSS region transcription start site region 2600
Gm11175 8 70699162 to 70700080 918 - antisense lncRNA gene predicted gene 11175
Tssr81649 8 70699821 to 70699869 48 - TSS region transcription start site region 81649
Tssr81650 8 70699996 to 70700067 71 - TSS region transcription start site region 81650
Tssr81651 8 70700070 to 70700088 18 - TSS region transcription start site region 81651
Tssr81652 8 70700196 to 70700233 37 - TSS region transcription start site region 81652
Tssr77801 8 70700207 to 70700214 7 + TSS region transcription start site region 77801
Tssr77802 8 70700293 to 70700298 5 + TSS region transcription start site region 77802
Tssr81653 8 70700403 to 70700418 15 - TSS region transcription start site region 81653
Tssr81654 8 70700447 to 70700461 14 - TSS region transcription start site region 81654
Cpgi20488 8 70700628 to 70700941 313 CpG island CpG island 20488
Tssr77803 8 70703423 to 70703433 10 + TSS region transcription start site region 77803
Tssr77804 8 70703435 to 70703473 38 + TSS region transcription start site region 77804
Iqcn 8 70703457 to 70717650 14193 + protein coding gene IQ motif containing N
Tssr77805 8 70703478 to 70703499 21 + TSS region transcription start site region 77805
Tssr77806 8 70703517 to 70703523 6 + TSS region transcription start site region 77806
Tssr77807 8 70704039 to 70704044 5 + TSS region transcription start site region 77807
Tssr77808 8 70704047 to 70704064 17 + TSS region transcription start site region 77808
Gm34255 8 70708458 to 70724507 16049 - lncRNA gene predicted gene, 34255
Tssr77809 8 70715753 to 70715759 6 + TSS region transcription start site region 77809
Cpgi20489 8 70718369 to 70718716 347 CpG island CpG island 20489
Tssr77810 8 70718509 to 70718520 11 + TSS region transcription start site region 77810
Tssr77811 8 70718534 to 70718549 15 + TSS region transcription start site region 77811
Gm3336 8 70718543 to 70722634 4091 + protein coding gene predicted gene 3336
Tssr81655 8 70723539 to 70723573 34 - TSS region transcription start site region 81655
Tssr81656 8 70723587 to 70723605 18 - TSS region transcription start site region 81656
Tssr77812 8 70724044 to 70724059 15 + TSS region transcription start site region 77812
Pde4c 8 70724064 to 70751186 27122 + protein coding gene phosphodiesterase 4C, cAMP specific
Tssr77813 8 70724067 to 70724078 11 + TSS region transcription start site region 77813
Tssr77814 8 70724109 to 70724122 13 + TSS region transcription start site region 77814
Tssr77815 8 70724176 to 70724185 9 + TSS region transcription start site region 77815
Cpgi20490 8 70729828 to 70730499 671 CpG island CpG island 20490
Cpgi20491 8 70742998 to 70743719 721 CpG island CpG island 20491
Tssr77816 8 70743108 to 70743114 6 + TSS region transcription start site region 77816
Cpgi20492 8 70743746 to 70744653 907 CpG island CpG island 20492
Cpgi20493 8 70745098 to 70745486 388 CpG island CpG island 20493
Cpgi20494 8 70753246 to 70753644 398 CpG island CpG island 20494
Cpgi20495 8 70754423 to 70755660 1237 CpG island CpG island 20495
Tssr77817 8 70754679 to 70754751 72 + TSS region transcription start site region 77817
Rab3a 8 70754679 to 70758677 3998 + protein coding gene RAB3A, member RAS oncogene family
Tssr77818 8 70755880 to 70755892 12 + TSS region transcription start site region 77818
Tssr77819 8 70755950 to 70755968 18 + TSS region transcription start site region 77819
Tssr77820 8 70756453 to 70756473 20 + TSS region transcription start site region 77820
Tssr77821 8 70758087 to 70758098 11 + TSS region transcription start site region 77821
Tssr77822 8 70758108 to 70758134 26 + TSS region transcription start site region 77822
Tssr77823 8 70758183 to 70758200 17 + TSS region transcription start site region 77823
Tssr2601 8 70758256 to 70758267 11 + TSS region transcription start site region 2601
Mpv17l2 8 70758649 to 70760921 2272 - protein coding gene MPV17 mitochondrial membrane protein-like 2
Cpgi20496 8 70760267 to 70761438 1171 CpG island CpG island 20496
Tssr81657 8 70760499 to 70760511 12 - TSS region transcription start site region 81657
Tssr81658 8 70760845 to 70760854 9 - TSS region transcription start site region 81658
Tssr81659 8 70760889 to 70760953 64 - TSS region transcription start site region 81659
Tssr81660 8 70760955 to 70760968 13 - TSS region transcription start site region 81660