Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Eae36 | 8 | 56322440 | QTL | experimental allergic encephalomyelitis susceptibility 36 | ||
W6q9 | 8 | 39271449 | QTL | weight 6 weeks QTL 9 | ||
Egq12 | 8 | 39271449 | QTL | early growth QTL 12 | ||
W10q14 | 8 | 39271449 | QTL | weight 10 weeks QTL 14 | ||
Orq3 | 8 | 39271449 | QTL | ovulation rate QTL 3 | ||
Armc6 | 8 | 14250 | - | protein coding gene | armadillo repeat containing 6 | |
Cpgi20446 | 8 | 1134 | CpG island | CpG island 20446 | ||
Tssr81601 | 8 | 63 | - | TSS region | transcription start site region 81601 | |
Tssr77717 | 8 | 41 | + | TSS region | transcription start site region 77717 | |
Sugp2 | 8 | 28896 | + | protein coding gene | SURP and G patch domain containing 2 | |
Tssr81602 | 8 | 58 | - | TSS region | transcription start site region 81602 | |
Tssr77718 | 8 | 76 | + | TSS region | transcription start site region 77718 | |
Tssr77719 | 8 | 15 | + | TSS region | transcription start site region 77719 | |
Tssr77720 | 8 | 14 | + | TSS region | transcription start site region 77720 | |
Tssr77721 | 8 | 17 | + | TSS region | transcription start site region 77721 | |
Tssr77722 | 8 | 18 | + | TSS region | transcription start site region 77722 | |
Gm38427 | 8 | 7567 | + | unclassified gene | predicted gene, 38427 | |
Tssr77723 | 8 | 13 | + | TSS region | transcription start site region 77723 | |
Tssr2595 | 8 | 13 | + | TSS region | transcription start site region 2595 | |
Tssr77724 | 8 | 12 | + | TSS region | transcription start site region 77724 | |
Cpgi20447 | 8 | 182 | CpG island | CpG island 20447 | ||
Cpgi20448 | 8 | 1437 | CpG island | CpG island 20448 | ||
Homer3 | 8 | 11470 | + | protein coding gene | homer scaffolding protein 3 | |
Tssr77725 | 8 | 66 | + | TSS region | transcription start site region 77725 | |
Tssr77726 | 8 | 25 | + | TSS region | transcription start site region 77726 | |
Ddx49 | 8 | 9623 | - | protein coding gene | DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 | |
Cpgi20449 | 8 | 1033 | CpG island | CpG island 20449 | ||
Tssr81603 | 8 | 32 | - | TSS region | transcription start site region 81603 | |
Tssr81604 | 8 | 1 | - | TSS region | transcription start site region 81604 | |
Tssr77727 | 8 | 87 | + | TSS region | transcription start site region 77727 | |
Tssr77728 | 8 | 6 | + | TSS region | transcription start site region 77728 | |
Tssr77729 | 8 | 43 | + | TSS region | transcription start site region 77729 | |
Cope | 8 | 10205 | + | protein coding gene | coatomer protein complex, subunit epsilon | |
Tssr81605 | 8 | 13 | - | TSS region | transcription start site region 81605 | |
Tssr81606 | 8 | 40 | - | TSS region | transcription start site region 81606 | |
Tssr81607 | 8 | 4 | - | TSS region | transcription start site region 81607 | |
Tssr2596 | 8 | 20 | + | TSS region | transcription start site region 2596 | |
Cpgi20450 | 8 | 1188 | CpG island | CpG island 20450 | ||
Tssr77730 | 8 | 76 | + | TSS region | transcription start site region 77730 | |
Cers1 | 8 | 15813 | + | protein coding gene | ceramide synthase 1 | |
Tssr77731 | 8 | 10 | + | TSS region | transcription start site region 77731 | |
Tssr81608 | 8 | 14 | - | TSS region | transcription start site region 81608 | |
Gdf1 | 8 | 1770 | + | protein coding gene | growth differentiation factor 1 | |
Cpgi20451 | 8 | 1955 | CpG island | CpG island 20451 | ||
Tssr77732 | 8 | 22 | + | TSS region | transcription start site region 77732 | |
Tssr77733 | 8 | 22 | + | TSS region | transcription start site region 77733 | |
Upf1 | 8 | 21753 | - | protein coding gene | UPF1 regulator of nonsense transcripts homolog (yeast) | |
Tssr81609 | 8 | 4 | - | TSS region | transcription start site region 81609 | |
Cpgi20452 | 8 | 545 | CpG island | CpG island 20452 | ||
Cpgi20453 | 8 | 1826 | CpG island | CpG island 20453 | ||
Tssr77734 | 8 | 22 | + | TSS region | transcription start site region 77734 | |
Tssr81610 | 8 | 93 | - | TSS region | transcription start site region 81610 | |
Cpgi20454 | 8 | 3872 | CpG island | CpG island 20454 | ||
Tssr77735 | 8 | 17 | + | TSS region | transcription start site region 77735 | |
Comp | 8 | 8508 | + | protein coding gene | cartilage oligomeric matrix protein | |
Tssr77736 | 8 | 7 | + | TSS region | transcription start site region 77736 | |
Tssr77737 | 8 | 13 | + | TSS region | transcription start site region 77737 | |
Tssr77738 | 8 | 22 | + | TSS region | transcription start site region 77738 | |
Tssr77739 | 8 | 20 | + | TSS region | transcription start site region 77739 | |
Tssr77740 | 8 | 31 | + | TSS region | transcription start site region 77740 | |
Tssr77741 | 8 | 24 | + | TSS region | transcription start site region 77741 | |
Crtc1 | 8 | 57224 | - | protein coding gene | CREB regulated transcription coactivator 1 | |
Tssr81611 | 8 | 2 | - | TSS region | transcription start site region 81611 | |
Cpgi20455 | 8 | 172 | CpG island | CpG island 20455 | ||
Tssr81612 | 8 | 32 | - | TSS region | transcription start site region 81612 | |
Cpgi20456 | 8 | 1226 | CpG island | CpG island 20456 | ||
Tssr81613 | 8 | 55 | - | TSS region | transcription start site region 81613 | |
Tssr77742 | 8 | 33 | + | TSS region | transcription start site region 77742 | |
Klhl26 | 8 | 26749 | - | protein coding gene | kelch-like 26 | |
Cpgi20457 | 8 | 1551 | CpG island | CpG island 20457 | ||
Cpgi20458 | 8 | 971 | CpG island | CpG island 20458 | ||
Tssr81614 | 8 | 58 | - | TSS region | transcription start site region 81614 | |
Tssr81615 | 8 | 16 | - | TSS region | transcription start site region 81615 | |
Tmem59l | 8 | 3491 | - | protein coding gene | transmembrane protein 59-like | |
Tssr81616 | 8 | 23 | - | TSS region | transcription start site region 81616 | |
Cpgi20459 | 8 | 424 | CpG island | CpG island 20459 | ||
Tssr81617 | 8 | 11 | - | TSS region | transcription start site region 81617 | |
Tssr81618 | 8 | 67 | - | TSS region | transcription start site region 81618 | |
Cpgi20460 | 8 | 926 | CpG island | CpG island 20460 | ||
Tssr81619 | 8 | 11 | - | TSS region | transcription start site region 81619 | |
1700020G03Rik | 8 | 888 | + | lncRNA gene | RIKEN cDNA 1700020G03 gene | |
Tssr81620 | 8 | 31 | - | TSS region | transcription start site region 81620 | |
Tssr81621 | 8 | 10 | - | TSS region | transcription start site region 81621 | |
Cpgi20461 | 8 | 949 | CpG island | CpG island 20461 | ||
Cpgi20462 | 8 | 2812 | CpG island | CpG island 20462 | ||
Tssr77743 | 8 | 11 | + | TSS region | transcription start site region 77743 | |
Tssr77744 | 8 | 14 | + | TSS region | transcription start site region 77744 | |
Tssr77745 | 8 | 11 | + | TSS region | transcription start site region 77745 | |
Crlf1 | 8 | 10923 | + | protein coding gene | cytokine receptor-like factor 1 | |
Cpgi20463 | 8 | 258 | CpG island | CpG island 20463 | ||
Tssr77746 | 8 | 4 | + | TSS region | transcription start site region 77746 | |
Cpgi20464 | 8 | 464 | CpG island | CpG island 20464 | ||
Tssr77747 | 8 | 56 | + | TSS region | transcription start site region 77747 | |
Cpgi20465 | 8 | 202 | CpG island | CpG island 20465 | ||
Cpgi20466 | 8 | 1026 | CpG island | CpG island 20466 | ||
Rex1bd | 8 | 2460 | - | protein coding gene | required for excision 1-B domain containing | |
Cpgi20467 | 8 | 1142 | CpG island | CpG island 20467 | ||
Tssr81622 | 8 | 24 | - | TSS region | transcription start site region 81622 | |
Tssr81623 | 8 | 30 | - | TSS region | transcription start site region 81623 | |
Tssr81624 | 8 | 56 | - | TSS region | transcription start site region 81624 | |
Uba52 | 8 | 2101 | - | protein coding gene | ubiquitin A-52 residue ribosomal protein fusion product 1 | |
Cpgi20468 | 8 | 1103 | CpG island | CpG island 20468 | ||
Tssr81625 | 8 | 100 | - | TSS region | transcription start site region 81625 | |
Tssr77748 | 8 | 72 | + | TSS region | transcription start site region 77748 | |
4930522P08Rik | 8 | 2178 | + | unclassified non-coding RNA gene | RIKEN cDNA 4930522P08 gene | |
Tssr77749 | 8 | 22 | + | TSS region | transcription start site region 77749 | |
Tssr81626 | 8 | 32 | - | TSS region | transcription start site region 81626 | |
Tssr77750 | 8 | 8 | + | TSS region | transcription start site region 77750 | |
Kxd1 | 8 | 9784 | - | protein coding gene | KxDL motif containing 1 | |
Tssr77751 | 8 | 29 | + | TSS region | transcription start site region 77751 | |
Cpgi20469 | 8 | 526 | CpG island | CpG island 20469 | ||
Tssr81627 | 8 | 36 | - | TSS region | transcription start site region 81627 | |
Tssr81628 | 8 | 29 | - | TSS region | transcription start site region 81628 | |
Tssr2597 | 8 | 8 | - | TSS region | transcription start site region 2597 | |
Cpgi20470 | 8 | 921 | CpG island | CpG island 20470 | ||
Tssr81629 | 8 | 51 | - | TSS region | transcription start site region 81629 | |
Fkbp8 | 8 | 7604 | + | protein coding gene | FK506 binding protein 8 | |
Tssr77752 | 8 | 29 | + | TSS region | transcription start site region 77752 | |
Tssr77753 | 8 | 11 | + | TSS region | transcription start site region 77753 | |
Tssr77754 | 8 | 11 | + | TSS region | transcription start site region 77754 | |
Tssr81630 | 8 | 6 | - | TSS region | transcription start site region 81630 | |
Tssr81631 | 8 | 37 | - | TSS region | transcription start site region 81631 | |
Tssr77755 | 8 | 25 | + | TSS region | transcription start site region 77755 | |
Tssr77756 | 8 | 18 | + | TSS region | transcription start site region 77756 | |
Tssr77757 | 8 | 6 | + | TSS region | transcription start site region 77757 | |
Tssr77758 | 8 | 23 | + | TSS region | transcription start site region 77758 | |
Tssr77759 | 8 | 42 | + | TSS region | transcription start site region 77759 | |
Tssr77760 | 8 | 28 | + | TSS region | transcription start site region 77760 | |
Tssr77761 | 8 | 11 | + | TSS region | transcription start site region 77761 | |
Tssr77762 | 8 | 18 | + | TSS region | transcription start site region 77762 | |
Tssr77763 | 8 | 87 | + | TSS region | transcription start site region 77763 | |
Tssr77764 | 8 | 36 | + | TSS region | transcription start site region 77764 | |
Cpgi20471 | 8 | 1695 | CpG island | CpG island 20471 | ||
Ell | 8 | 53183 | + | protein coding gene | elongation factor RNA polymerase II | |
Tssr77765 | 8 | 25 | + | TSS region | transcription start site region 77765 | |
Tssr2598 | 8 | 3 | - | TSS region | transcription start site region 2598 | |
Tssr77766 | 8 | 3 | + | TSS region | transcription start site region 77766 | |
Tssr77767 | 8 | 3 | + | TSS region | transcription start site region 77767 | |
Cpgi20472 | 8 | 1489 | CpG island | CpG island 20472 | ||
Tssr77768 | 8 | 34 | + | TSS region | transcription start site region 77768 | |
Tssr77769 | 8 | 11 | + | TSS region | transcription start site region 77769 | |
Tssr77770 | 8 | 21 | + | TSS region | transcription start site region 77770 | |
Tssr77771 | 8 | 11 | + | TSS region | transcription start site region 77771 | |
Tssr77772 | 8 | 15 | + | TSS region | transcription start site region 77772 | |
Tssr77773 | 8 | 46 | + | TSS region | transcription start site region 77773 | |
Isyna1 | 8 | 2809 | + | protein coding gene | myo-inositol 1-phosphate synthase A1 | |
Tssr77774 | 8 | 36 | + | TSS region | transcription start site region 77774 | |
Tssr77775 | 8 | 29 | + | TSS region | transcription start site region 77775 | |
Tssr77776 | 8 | 26 | + | TSS region | transcription start site region 77776 | |
Ssbp4 | 8 | 10896 | - | protein coding gene | single stranded DNA binding protein 4 | |
Cpgi20473 | 8 | 1663 | CpG island | CpG island 20473 | ||
Tssr81632 | 8 | 17 | - | TSS region | transcription start site region 81632 | |
Tssr81633 | 8 | 28 | - | TSS region | transcription start site region 81633 | |
Tssr81634 | 8 | 22 | - | TSS region | transcription start site region 81634 | |
Cpgi20474 | 8 | 273 | CpG island | CpG island 20474 | ||
Tssr81635 | 8 | 41 | - | TSS region | transcription start site region 81635 | |
Cpgi20475 | 8 | 1169 | CpG island | CpG island 20475 | ||
Tssr81636 | 8 | 69 | - | TSS region | transcription start site region 81636 | |
Cpgi20476 | 8 | 1478 | CpG island | CpG island 20476 | ||
Tssr77777 | 8 | 22 | + | TSS region | transcription start site region 77777 | |
Gm45546 | 8 | 2393 | + | unclassified gene | predicted gene 45546 | |
Tssr77778 | 8 | 19 | + | TSS region | transcription start site region 77778 | |
Cpgi20477 | 8 | 968 | CpG island | CpG island 20477 | ||
Tssr77779 | 8 | 11 | + | TSS region | transcription start site region 77779 | |
Tssr77780 | 8 | 26 | + | TSS region | transcription start site region 77780 | |
Tssr77781 | 8 | 14 | + | TSS region | transcription start site region 77781 | |
Tssr77782 | 8 | 18 | + | TSS region | transcription start site region 77782 | |
Tssr81637 | 8 | 26 | - | TSS region | transcription start site region 81637 | |
Tssr77783 | 8 | 114 | + | TSS region | transcription start site region 77783 | |
Lrrc25 | 8 | 4006 | + | protein coding gene | leucine rich repeat containing 25 | |
Tssr77784 | 8 | 11 | + | TSS region | transcription start site region 77784 | |
Tssr77785 | 8 | 11 | + | TSS region | transcription start site region 77785 | |
Tssr77786 | 8 | 19 | + | TSS region | transcription start site region 77786 | |
Tssr77787 | 8 | 32 | + | TSS region | transcription start site region 77787 | |
Tssr77788 | 8 | 58 | + | TSS region | transcription start site region 77788 | |
Tssr77789 | 8 | 16 | + | TSS region | transcription start site region 77789 | |
Tssr77790 | 8 | 33 | + | TSS region | transcription start site region 77790 | |
Tssr81638 | 8 | 35 | - | TSS region | transcription start site region 81638 | |
Tssr77791 | 8 | 10 | + | TSS region | transcription start site region 77791 | |
Cpgi20478 | 8 | 199 | CpG island | CpG island 20478 | ||
Gdf15 | 8 | 3063 | - | protein coding gene | growth differentiation factor 15 | |
Cpgi20479 | 8 | 886 | CpG island | CpG island 20479 | ||
Cpgi20480 | 8 | 433 | CpG island | CpG island 20480 | ||
Tssr81639 | 8 | 9 | - | TSS region | transcription start site region 81639 | |
Tssr81640 | 8 | 42 | - | TSS region | transcription start site region 81640 | |
Gm34154 | 8 | 5392 | + | lncRNA gene | predicted gene, 34154 | |
Tssr81641 | 8 | 11 | - | TSS region | transcription start site region 81641 | |
Pgpep1 | 8 | 13420 | - | protein coding gene | pyroglutamyl-peptidase I | |
Tssr81642 | 8 | 7 | - | TSS region | transcription start site region 81642 | |
Tssr81643 | 8 | 4 | - | TSS region | transcription start site region 81643 | |
Tssr77792 | 8 | 9 | + | TSS region | transcription start site region 77792 | |
Tssr77793 | 8 | 21 | + | TSS region | transcription start site region 77793 | |
Tssr81644 | 8 | 12 | - | TSS region | transcription start site region 81644 | |
Cpgi20481 | 8 | 1273 | CpG island | CpG island 20481 | ||
Tssr81645 | 8 | 51 | - | TSS region | transcription start site region 81645 | |
Tssr81646 | 8 | 16 | - | TSS region | transcription start site region 81646 | |
Tssr77794 | 8 | 15 | + | TSS region | transcription start site region 77794 | |
Cpgi20482 | 8 | 814 | CpG island | CpG island 20482 | ||
Tssr77795 | 8 | 69 | + | TSS region | transcription start site region 77795 | |
Lsm4 | 8 | 5504 | + | protein coding gene | LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated |