Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:107035406-107135417

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps4a 8 107031326 to 107045756 14430 + protein coding gene vacuolar protein sorting 4A
Gm16209 8 107037480 to 107038106 626 - pseudogene predicted gene 16209
Pdf 8 107046289 to 107048614 2325 - protein coding gene peptide deformylase (mitochondrial)
Cpgi20984 8 107047847 to 107049096 1249 CpG island CpG island 20984
Tssr82779 8 107048160 to 107048172 12 - TSS region transcription start site region 82779
Tssr82780 8 107048198 to 107048209 11 - TSS region transcription start site region 82780
Tssr79282 8 107048211 to 107048285 74 + TSS region transcription start site region 79282
Gm10627 8 107048243 to 107050562 2319 unclassified gene predicted gene 10627
Tssr82781 8 107048573 to 107048631 58 - TSS region transcription start site region 82781
Cog8 8 107048709 to 107056737 8028 - protein coding gene component of oligomeric golgi complex 8
Cpgi20985 8 107055948 to 107057582 1634 CpG island CpG island 20985
Tssr82782 8 107056650 to 107056691 41 - TSS region transcription start site region 82782
Tssr82783 8 107056697 to 107056707 10 - TSS region transcription start site region 82783
Tssr79283 8 107056870 to 107056913 43 + TSS region transcription start site region 79283
Nip7 8 107056877 to 107060931 4054 + protein coding gene NIP7, nucleolar pre-rRNA processing protein
Tssr79284 8 107056922 to 107056927 5 + TSS region transcription start site region 79284
Tssr79285 8 107056931 to 107056934 3 + TSS region transcription start site region 79285
Tssr79286 8 107057191 to 107057211 20 + TSS region transcription start site region 79286
Tmed6 8 107061484 to 107065644 4160 - protein coding gene transmembrane p24 trafficking protein 6
Tssr82784 8 107063116 to 107063119 3 - TSS region transcription start site region 82784
Tssr82785 8 107065615 to 107065628 13 - TSS region transcription start site region 82785
Tssr82786 8 107065632 to 107065650 18 - TSS region transcription start site region 82786
Tssr82787 8 107065662 to 107065665 3 - TSS region transcription start site region 82787
Terf2 8 107069400 to 107096547 27147 - protein coding gene telomeric repeat binding factor 2
Tssr82788 8 107080665 to 107080667 2 - TSS region transcription start site region 82788
Tssr82789 8 107085406 to 107085417 11 - TSS region transcription start site region 82789
Cpgi20986 8 107095916 to 107096691 775 CpG island CpG island 20986
Tssr79287 8 107095935 to 107095949 14 + TSS region transcription start site region 79287
Mir7075 8 107096025 to 107096106 81 - miRNA gene microRNA 7075
Tssr82790 8 107096376 to 107096406 30 - TSS region transcription start site region 82790
Tssr82791 8 107096510 to 107096562 52 - TSS region transcription start site region 82791
Tssr79288 8 107096918 to 107096935 17 + TSS region transcription start site region 79288
Cpgi20987 8 107109121 to 107109464 343 CpG island CpG island 20987
C630050I24Rik 8 107119110 to 107119892 782 + unclassified non-coding RNA gene RIKEN cDNA C630050I24 gene
Gm39240 8 107124087 to 107126761 2674 + lncRNA gene predicted gene, 39240