Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
repro13 | 7 | 33679730 | heritable phenotypic marker | reproductive mutant 13, JAX Reproductive Mutagenesis Program | ||
Asp3 | 7 | 9536569 | QTL | audiogenic seizure prone 3 | ||
Gm28383 | 7 | 138 | - | pseudogene | predicted gene 28383 | |
Gm28384 | 7 | 462 | + | pseudogene | predicted gene 28384 | |
Scgb2b17 | 7 | 1970 | - | protein coding gene | secretoglobin, family 2B, member 17 | |
Scgb1b17 | 7 | 1181 | + | protein coding gene | secretoglobin, family 1B, member 17 | |
Gm28992 | 7 | 138 | - | pseudogene | predicted gene 28992 | |
Rpl23a-ps7 | 7 | 459 | + | pseudogene | ribosomal protein L23A, pseudogene 7 | |
Scgb2b33 | 7 | 1785 | - | protein coding gene | secretoglobin, family 2B, member 33 | |
Gm9162 | 7 | 990 | + | pseudogene | predicted gene 9162 | |
Gm28559 | 7 | 138 | - | pseudogene | predicted gene 28559 | |
Gm6003 | 7 | 462 | + | pseudogene | predicted gene 6003 | |
Scgb2b18 | 7 | 1969 | - | protein coding gene | secretoglobin, family 2B, member 18 | |
Scgb1b18 | 7 | 1300 | + | protein coding gene | secretoglobin, family 1B, member 18 | |
Scgb2b19 | 7 | 1968 | - | protein coding gene | secretoglobin, family 2B, member 19 | |
Scgb1b19 | 7 | 1184 | + | protein coding gene | secretoglobin, family 1B, member 19 | |
Gm9167 | 7 | 961 | + | pseudogene | predicted gene 9167 | |
Scgb2b20 | 7 | 1976 | - | protein coding gene | secretoglobin, family 2B, member 20 | |
Scgb1b20 | 7 | 1325 | + | protein coding gene | secretoglobin, family 1B, member 20 | |
Gm5732 | 7 | 1006 | + | pseudogene | predicted gene 5732 | |
Gm28794 | 7 | 135 | - | pseudogene | predicted gene 28794 | |
Gm5731 | 7 | 480 | + | pseudogene | predicted gene 5731 | |
Scgb1b34-ps | 7 | 1782 | - | pseudogene | secretoglobin, family 1B, member 34, pseudogene | |
Scgb2b21 | 7 | 1967 | - | protein coding gene | secretoglobin, family 2B, member 21 | |
Tssr2195 | 7 | 3 | + | TSS region | transcription start site region 2195 | |
Scgb1b21 | 7 | 1182 | + | protein coding gene | secretoglobin, family 1B, member 21 | |
Gm12770 | 7 | 461 | - | pseudogene | predicted gene 12770 | |
Gm12771 | 7 | 134 | + | pseudogene | predicted gene 12771 | |
Scgb2b22-ps | 7 | 1788 | - | pseudogene | secretoglobin, family 2B, member 22, pseudogene | |
Tssr2196 | 7 | 10 | - | TSS region | transcription start site region 2196 | |
Scgb1b22-ps | 7 | 1185 | + | pseudogene | secretoglobin, family 1B, member 22, pseudogene | |
Scgb2b23-ps | 7 | 28136 | - | pseudogene | secretoglobin, family 2B, member 23, pseudogene | |
Tssr65865 | 7 | 2 | + | TSS region | transcription start site region 65865 | |
Scgb1b23-ps | 7 | 369 | + | pseudogene | secretoglobin, family 1B, member 23, pseudogene | |
Tssr65866 | 7 | 40 | + | TSS region | transcription start site region 65866 | |
Gm12763 | 7 | 4270 | + | lincRNA gene | predicted gene 12763 | |
Rpl23a-ps12 | 7 | 467 | + | pseudogene | ribosomal protein L23A, pseudogene 12 | |
Scgb2b24 | 7 | 2102 | - | protein coding gene | secretoglobin, family 2B, member 24 | |
Tssr71961 | 7 | 19 | - | TSS region | transcription start site region 71961 | |
Tssr2197 | 7 | 5 | + | TSS region | transcription start site region 2197 | |
D7Mit308 | 7 | 115 | DNA segment | DNA Segment, Chr 7, Massachusetts Institute of Technology 308 | ||
D7Dcr5 | 7 | 100 | DNA segment | DNA Segment, Chr 7, Derry C. Roopenian 5 | ||
Tssr65867 | 7 | 6 | + | TSS region | transcription start site region 65867 | |
Tssr65868 | 7 | 7 | + | TSS region | transcription start site region 65868 | |
Scgb1b24 | 7 | 1183 | + | protein coding gene | secretoglobin, family 1B, member 24 | |
Gm12782 | 7 | 708 | - | pseudogene | predicted gene 12782 | |
Gm28614 | 7 | 825 | - | pseudogene | predicted gene 28614 | |
W3q10 | 7 | 24700915 | QTL | weight 3 weeks QTL 10 | ||
Kidq5 | 7 | 24700915 | QTL | kidney weight QTL 5 | ||
Splq7 | 7 | 24700915 | QTL | spleen weight QTL 7 | ||
W10q18 | 7 | 24700915 | QTL | weight 10 weeks QTL 18 | ||
Tailq5 | 7 | 24700915 | QTL | tail length QTL 5 | ||
W6q17 | 7 | 24700915 | QTL | weight 6 weeks QTL 17 | ||
D7Mit55 | 7 | 148 | DNA segment | DNA segment, Chr 7, Massachusetts Institute of Technology 55 | ||
Lvrq6 | 7 | 24700915 | QTL | liver weight QTL 6 | ||
Epfq5 | 7 | 24700915 | QTL | epididymal fat pad weight QTL 5 | ||
Gm26443 | 7 | 109 | + | miRNA gene | predicted gene, 26443 | |
Gm12768 | 7 | 728 | + | pseudogene | predicted gene 12768 | |
Scgb2b25-ps | 7 | 1762 | - | pseudogene | secretoglobin, family 2B, member 25, pseudogene | |
Tssr71962 | 7 | 4 | - | TSS region | transcription start site region 71962 | |
Scgb1b25-ps | 7 | 1276 | + | pseudogene | secretoglobin, family 1B, member 25, pseudogene | |
Gm12757 | 7 | 799 | + | pseudogene | predicted gene 12757 | |
Tssr71963 | 7 | 7 | - | TSS region | transcription start site region 71963 | |
Gm28615 | 7 | 837 | - | pseudogene | predicted gene 28615 | |
Gm12765 | 7 | 976 | + | pseudogene | predicted gene 12765 | |
Scgb2b26 | 7 | 1988 | - | protein coding gene | secretoglobin, family 2B, member 26 | |
Tssr65869 | 7 | 13 | + | TSS region | transcription start site region 65869 | |
Tssr71964 | 7 | 4 | - | TSS region | transcription start site region 71964 | |
Tssr71965 | 7 | 9 | - | TSS region | transcription start site region 71965 | |
Tssr71966 | 7 | 2 | - | TSS region | transcription start site region 71966 | |
Tssr71967 | 7 | 2 | - | TSS region | transcription start site region 71967 | |
Tssr71968 | 7 | 28 | - | TSS region | transcription start site region 71968 | |
Scgb1b26-ps | 7 | 1181 | + | pseudogene | secretoglobin, family 1B, member 26, pseudogene | |
Gm28184 | 7 | 66 | + | pseudogene | predicted gene 28184 | |
Gm12773 | 7 | 520 | + | pseudogene | predicted gene 12773 | |
Gm12755 | 7 | 8449 | + | pseudogene | predicted gene 12755 | |
Scgb2b27 | 7 | 2021 | - | protein coding gene | secretoglobin, family 2B, member 27 | |
Tssr71969 | 7 | 12 | - | TSS region | transcription start site region 71969 | |
Tssr71970 | 7 | 6 | - | TSS region | transcription start site region 71970 | |
Tssr71971 | 7 | 4 | - | TSS region | transcription start site region 71971 | |
Tssr71972 | 7 | 12 | - | TSS region | transcription start site region 71972 | |
Tssr65870 | 7 | 4 | + | TSS region | transcription start site region 65870 | |
Tssr65871 | 7 | 13 | + | TSS region | transcription start site region 65871 | |
Scgb1b27 | 7 | 1314 | + | protein coding gene | secretoglobin, family 1B, member 27 | |
Tssr65872 | 7 | 14 | + | TSS region | transcription start site region 65872 | |
Tssr71973 | 7 | 13 | - | TSS region | transcription start site region 71973 | |
Tssr65873 | 7 | 7 | + | TSS region | transcription start site region 65873 | |
Gm12760 | 7 | 985 | - | pseudogene | predicted gene 12760 | |
Tssr71974 | 7 | 1 | - | TSS region | transcription start site region 71974 | |
Gm12779 | 7 | 142 | - | pseudogene | predicted gene 12779 | |
Scgb1b30 | 7 | 5406 | + | protein coding gene | secretoglobin, family 1B, member 30 | |
Tssr65874 | 7 | 8 | + | TSS region | transcription start site region 65874 | |
Wtip | 7 | 23725 | - | protein coding gene | WT1-interacting protein | |
Cpgi18841 | 7 | 1531 | CpG island | CpG island 18841 | ||
Tssr71975 | 7 | 82 | - | TSS region | transcription start site region 71975 | |
Uba2 | 7 | 27888 | - | protein coding gene | ubiquitin-like modifier activating enzyme 2 | |
Cpgi18842 | 7 | 903 | CpG island | CpG island 18842 | ||
Tssr71976 | 7 | 11 | - | TSS region | transcription start site region 71976 | |
Tssr71977 | 7 | 66 | - | TSS region | transcription start site region 71977 | |
Tssr65875 | 7 | 23 | + | TSS region | transcription start site region 65875 | |
Tssr65876 | 7 | 12 | + | TSS region | transcription start site region 65876 | |
Tssr65877 | 7 | 17 | + | TSS region | transcription start site region 65877 | |
Gm12778 | 7 | 332 | + | pseudogene | predicted gene 12778 | |
Gm12783 | 7 | 3246 | + | pseudogene | predicted gene 12783 | |
Pdcd2l | 7 | 12162 | - | protein coding gene | programmed cell death 2-like | |
Tssr71978 | 7 | 9 | - | TSS region | transcription start site region 71978 | |
Tssr71979 | 7 | 30 | - | TSS region | transcription start site region 71979 | |
Tssr71980 | 7 | 11 | - | TSS region | transcription start site region 71980 | |
Cpgi18843 | 7 | 793 | CpG island | CpG island 18843 | ||
Tssr71981 | 7 | 18 | - | TSS region | transcription start site region 71981 | |
Tssr71982 | 7 | 14 | - | TSS region | transcription start site region 71982 | |
Tssr71983 | 7 | 34 | - | TSS region | transcription start site region 71983 | |
Gpi1 | 7 | 29006 | - | protein coding gene | glucose phosphate isomerase 1 | |
Lar | 7 | 29006 | QTL | low antibody response | ||
Tssr71984 | 7 | 4 | - | TSS region | transcription start site region 71984 | |
Tssr71985 | 7 | 39 | - | TSS region | transcription start site region 71985 | |
Tssr71986 | 7 | 16 | - | TSS region | transcription start site region 71986 | |
Tssr71987 | 7 | 20 | - | TSS region | transcription start site region 71987 | |
Tssr71988 | 7 | 25 | - | TSS region | transcription start site region 71988 | |
Tssr71989 | 7 | 12 | - | TSS region | transcription start site region 71989 | |
Gm26762 | 7 | 5481 | + | lincRNA gene | predicted gene, 26762 | |
Tssr71990 | 7 | 21 | - | TSS region | transcription start site region 71990 | |
Tssr71991 | 7 | 16 | - | TSS region | transcription start site region 71991 | |
Cpgi18844 | 7 | 730 | CpG island | CpG island 18844 | ||
Tssr71992 | 7 | 23 | - | TSS region | transcription start site region 71992 | |
Tssr71993 | 7 | 24 | - | TSS region | transcription start site region 71993 | |
Tssr71994 | 7 | 11 | - | TSS region | transcription start site region 71994 | |
Tssr71995 | 7 | 24 | - | TSS region | transcription start site region 71995 | |
Gm12762 | 7 | 2809 | - | lincRNA gene | predicted gene 12762 | |
Gm12758 | 7 | 3439 | + | antisense lncRNA gene | predicted gene 12758 | |
Cpgi18845 | 7 | 1183 | CpG island | CpG island 18845 | ||
Tssr71996 | 7 | 27 | - | TSS region | transcription start site region 71996 | |
Tssr71997 | 7 | 32 | - | TSS region | transcription start site region 71997 | |
Tssr71998 | 7 | 7 | - | TSS region | transcription start site region 71998 | |
4931406P16Rik | 7 | 76844 | - | protein coding gene | RIKEN cDNA 4931406P16 gene | |
Tssr71999 | 7 | 25 | - | TSS region | transcription start site region 71999 | |
BC060293 | 7 | 1103 | - | unclassified gene | cDNA sequence BC060293 | |
Gm6096 | 7 | 455 | + | protein coding gene | predicted gene 6096 | |
Tssr72000 | 7 | 4 | - | TSS region | transcription start site region 72000 | |
Tssr72001 | 7 | 11 | - | TSS region | transcription start site region 72001 | |
Tssr72002 | 7 | 25 | - | TSS region | transcription start site region 72002 | |
Cpgi18846 | 7 | 1137 | CpG island | CpG island 18846 | ||
Tssr65878 | 7 | 8 | + | TSS region | transcription start site region 65878 | |
Tssr72003 | 7 | 11 | - | TSS region | transcription start site region 72003 | |
Tssr72004 | 7 | 20 | - | TSS region | transcription start site region 72004 | |
Tssr72005 | 7 | 37 | - | TSS region | transcription start site region 72005 | |
Lsm14a | 7 | 45000 | - | protein coding gene | LSM14A mRNA processing body assembly factor | |
Tssr72006 | 7 | 17 | - | TSS region | transcription start site region 72006 | |
Tssr72007 | 7 | 1 | - | TSS region | transcription start site region 72007 | |
Gm44567 | 7 | 2630 | - | unclassified gene | predicted gene 44567 | |
Gm12774 | 7 | 415 | + | pseudogene | predicted gene 12774 | |
Tssr72008 | 7 | 9 | - | TSS region | transcription start site region 72008 | |
Cpgi18847 | 7 | 1652 | CpG island | CpG island 18847 | ||
Tssr65879 | 7 | 67 | + | TSS region | transcription start site region 65879 | |
Gm12764 | 7 | 6114 | + | antisense lncRNA gene | predicted gene 12764 | |
Tssr72009 | 7 | 12 | - | TSS region | transcription start site region 72009 | |
Tssr72010 | 7 | 63 | - | TSS region | transcription start site region 72010 | |
Tssr72011 | 7 | 11 | - | TSS region | transcription start site region 72011 | |
Tssr72012 | 7 | 21 | - | TSS region | transcription start site region 72012 | |
2310043P16Rik | 7 | 3880 | + | unclassified gene | RIKEN cDNA 2310043P16 gene | |
Tssr65880 | 7 | 56 | + | TSS region | transcription start site region 65880 | |
Cpgi18848 | 7 | 267 | CpG island | CpG island 18848 | ||
D7Mit79 | 7 | 111 | DNA segment | DNA segment, Chr 7, Massachusetts Institute of Technology 79 | ||
Gm12766 | 7 | 82748 | + | lincRNA gene | predicted gene 12766 | |
Gm12780 | 7 | 644 | - | pseudogene | predicted gene 12780 | |
Gm31709 | 7 | 380 | - | pseudogene | predicted gene, 31709 | |
Gm35297 | 7 | 24723 | - | lncRNA gene | predicted gene, 35297 | |
Tssr72013 | 7 | 15 | - | TSS region | transcription start site region 72013 | |
Gm12784 | 7 | 12943 | + | lincRNA gene | predicted gene 12784 | |
Cpgi18849 | 7 | 909 | CpG island | CpG island 18849 | ||
Cpgi18850 | 7 | 254 | CpG island | CpG island 18850 | ||
Gm35378 | 7 | 2124 | + | lncRNA gene | predicted gene, 35378 | |
Cpgi18851 | 7 | 501 | CpG island | CpG island 18851 | ||
Gm44837 | 7 | 716 | - | lincRNA gene | predicted gene 44837 | |
Kctd15 | 7 | 16494 | - | protein coding gene | potassium channel tetramerisation domain containing 15 | |
D7Ertd351e | 7 | 222 | DNA segment | DNA segment, Chr 7, ERATO Doi 351, expressed | ||
Cpgi18852 | 7 | 3150 | CpG island | CpG island 18852 | ||
Tssr72014 | 7 | 51 | - | TSS region | transcription start site region 72014 | |
Tssr65881 | 7 | 24 | + | TSS region | transcription start site region 65881 | |
Tssr72015 | 7 | 15 | - | TSS region | transcription start site region 72015 | |
Gm12781 | 7 | 5632 | + | antisense lncRNA gene | predicted gene 12781 | |
Tssr65882 | 7 | 11 | + | TSS region | transcription start site region 65882 | |
Tssr65883 | 7 | 34 | + | TSS region | transcription start site region 65883 | |
Gm12756 | 7 | 8586 | - | lincRNA gene | predicted gene 12756 | |
Chst8 | 7 | 138243 | - | protein coding gene | carbohydrate sulfotransferase 8 | |
Cpgi18853 | 7 | 1152 | CpG island | CpG island 18853 | ||
Cpgi18854 | 7 | 265 | CpG island | CpG island 18854 | ||
Tssr2198 | 7 | 1 | + | TSS region | transcription start site region 2198 | |
Tssr65884 | 7 | 4 | + | TSS region | transcription start site region 65884 | |
Tssr72016 | 7 | 5 | - | TSS region | transcription start site region 72016 | |
Cpgi18855 | 7 | 438 | CpG island | CpG island 18855 | ||
D7Mit156 | 7 | 143 | DNA segment | DNA segment, Chr 7, Massachusetts Institute of Technology 156 | ||
Cpgi18856 | 7 | 1827 | CpG island | CpG island 18856 | ||
Tssr72017 | 7 | 16 | - | TSS region | transcription start site region 72017 | |
Gm38987 | 7 | 31186 | + | lncRNA gene | predicted gene, 38987 | |
Cpgi18857 | 7 | 381 | CpG island | CpG island 18857 | ||
D7Ertd1e | 7 | 235 | DNA segment | DNA segment, Chr 7, ERATO Doi 1, expressed | ||
Tssr2199 | 7 | 4 | - | TSS region | transcription start site region 2199 | |
Cpgi18858 | 7 | 637 | CpG island | CpG island 18858 | ||
Tssr65885 | 7 | 15 | + | TSS region | transcription start site region 65885 |