Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:30846541-34037722

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360 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ffar3 7 30854330 to 30856178 1848 - protein coding gene free fatty acid receptor 3
Cpgi18824 7 30855111 to 30855309 198 CpG island CpG island 18824
Tssr71864 7 30856187 to 30856200 13 - TSS region transcription start site region 71864
Ffar1 7 30860568 to 30861470 902 - protein coding gene free fatty acid receptor 1
Cpgi18825 7 30861100 to 30861388 288 CpG island CpG island 18825
Cd22 7 30865404 to 30880342 14938 - protein coding gene CD22 antigen
Gm29439 7 30872733 to 30873333 600 + antisense lncRNA gene predicted gene 29439
Cpgi18826 7 30873320 to 30873644 324 CpG island CpG island 18826
Tssr71865 7 30878092 to 30878131 39 - TSS region transcription start site region 71865
Tssr71866 7 30880263 to 30880290 27 - TSS region transcription start site region 71866
D7Ertd128e 7 30885031 to 30886446 1415 + lincRNA gene DNA segment, Chr 7, ERATO Doi 128, expressed
Mag 7 30899176 to 30914873 15697 - protein coding gene myelin-associated glycoprotein
Cpgi18827 7 30908860 to 30909161 301 CpG island CpG island 18827
Tssr71867 7 30909186 to 30909239 53 - TSS region transcription start site region 71867
Tssr71868 7 30914832 to 30914878 46 - TSS region transcription start site region 71868
Tssr71869 7 30915016 to 30915049 33 - TSS region transcription start site region 71869
Gm44662 7 30916983 to 30946824 29841 + lincRNA gene predicted gene 44662
Hamp2 7 30922372 to 30924181 1809 - protein coding gene hepcidin antimicrobial peptide 2
Tssr71870 7 30924169 to 30924185 16 - TSS region transcription start site region 71870
Usf2-ps1 7 30926668 to 30927147 479 - pseudogene upstream transcription factor 2, pseudogene 1
Hamp 7 30942368 to 30944017 1649 - protein coding gene hepcidin antimicrobial peptide
Tssr71871 7 30944019 to 30944035 16 - TSS region transcription start site region 71871
Usf2 7 30945248 to 30956803 11555 - protein coding gene upstream transcription factor 2
Tssr71872 7 30946175 to 30946189 14 - TSS region transcription start site region 71872
Cpgi18828 7 30955702 to 30957967 2265 CpG island CpG island 18828
Gm17077 7 30955825 to 30958004 2179 + antisense lncRNA gene predicted gene 17077
Tssr71873 7 30956605 to 30956624 19 - TSS region transcription start site region 71873
Tssr71874 7 30956721 to 30956737 16 - TSS region transcription start site region 71874
Tssr71875 7 30956742 to 30956781 39 - TSS region transcription start site region 71875
Tssr71876 7 30956827 to 30956911 84 - TSS region transcription start site region 71876
Gm4673 7 30956909 to 30961619 4710 + antisense lncRNA gene predicted gene 4673
Tssr65819 7 30956927 to 30956963 36 + TSS region transcription start site region 65819
Tssr71877 7 30957060 to 30957089 29 - TSS region transcription start site region 71877
Tssr65820 7 30957134 to 30957137 3 + TSS region transcription start site region 65820
Tssr71878 7 30957220 to 30957267 47 - TSS region transcription start site region 71878
Tssr65821 7 30957298 to 30957300 2 + TSS region transcription start site region 65821
Tssr71879 7 30957342 to 30957375 33 - TSS region transcription start site region 71879
Lsr 7 30957770 to 30973464 15694 - protein coding gene lipolysis stimulated lipoprotein receptor
Cpgi18829 7 30958002 to 30958367 365 CpG island CpG island 18829
Tssr71880 7 30966354 to 30966371 17 - TSS region transcription start site region 71880
Tssr71881 7 30971917 to 30971928 11 - TSS region transcription start site region 71881
Tssr71882 7 30972169 to 30972197 28 - TSS region transcription start site region 71882
Cpgi18830 7 30972834 to 30974201 1367 CpG island CpG island 18830
Tssr71883 7 30973177 to 30973205 28 - TSS region transcription start site region 71883
Tssr71884 7 30973367 to 30973380 13 - TSS region transcription start site region 71884
Tssr71885 7 30973399 to 30973435 36 - TSS region transcription start site region 71885
Tssr71886 7 30973440 to 30973453 13 - TSS region transcription start site region 71886
Tssr71887 7 30973468 to 30973480 12 - TSS region transcription start site region 71887
Tssr71888 7 30973629 to 30973647 18 - TSS region transcription start site region 71888
Tssr65822 7 30973786 to 30973816 30 + TSS region transcription start site region 65822
Fam187b 7 30973804 to 30989726 15922 + protein coding gene family with sequence similarity 187, member B
Tssr65823 7 30973831 to 30973849 18 + TSS region transcription start site region 65823
Tssr71889 7 30973894 to 30973915 21 - TSS region transcription start site region 71889
Tssr2189 7 30977040 to 30977045 5 + TSS region transcription start site region 2189
Tssr65824 7 30977048 to 30977071 23 + TSS region transcription start site region 65824
Tssr65825 7 30977085 to 30977091 6 + TSS region transcription start site region 65825
Tssr65826 7 30981862 to 30981873 11 + TSS region transcription start site region 65826
Tssr2190 7 30981888 to 30981893 5 + TSS region transcription start site region 2190
Tssr65827 7 30981898 to 30981924 26 + TSS region transcription start site region 65827
Gm18196 7 30985489 to 30986340 851 - pseudogene predicted gene, 18196
Gm42377 7 30989791 to 31029001 39210 - lncRNA gene predicted gene, 42377
Tssr71890 7 31002797 to 31002807 10 - TSS region transcription start site region 71890
Tssr65828 7 31002924 to 31002942 18 + TSS region transcription start site region 65828
Fxyd5 7 31032723 to 31042331 9608 - protein coding gene FXYD domain-containing ion transport regulator 5
Tssr65829 7 31032853 to 31032923 70 + TSS region transcription start site region 65829
Tssr65830 7 31035228 to 31035268 40 + TSS region transcription start site region 65830
Tssr2191 7 31035460 to 31035485 25 - TSS region transcription start site region 2191
Tssr71891 7 31036457 to 31036499 42 - TSS region transcription start site region 71891
Gm38984 7 31036523 to 31057714 21191 + lncRNA gene predicted gene, 38984
Tssr65831 7 31036988 to 31037008 20 + TSS region transcription start site region 65831
Tssr71892 7 31037018 to 31037094 76 - TSS region transcription start site region 71892
Tssr65832 7 31037408 to 31037417 9 + TSS region transcription start site region 65832
Tssr65833 7 31037805 to 31037856 51 + TSS region transcription start site region 65833
Tssr65834 7 31037859 to 31037887 28 + TSS region transcription start site region 65834
Tssr71893 7 31037860 to 31037867 7 - TSS region transcription start site region 71893
Tssr71894 7 31037881 to 31037890 9 - TSS region transcription start site region 71894
Tssr71895 7 31037894 to 31037919 25 - TSS region transcription start site region 71895
Tssr71896 7 31037924 to 31037949 25 - TSS region transcription start site region 71896
Tssr71897 7 31039059 to 31039101 42 - TSS region transcription start site region 71897
Tssr71898 7 31040208 to 31040263 55 - TSS region transcription start site region 71898
Mir7050 7 31040258 to 31040317 59 - miRNA gene microRNA 7050
Tssr71899 7 31041485 to 31041497 12 - TSS region transcription start site region 71899
Tssr71900 7 31041539 to 31041564 25 - TSS region transcription start site region 71900
Tssr71901 7 31041624 to 31041638 14 - TSS region transcription start site region 71901
Tssr71902 7 31041709 to 31041720 11 - TSS region transcription start site region 71902
Tssr71903 7 31041732 to 31041776 44 - TSS region transcription start site region 71903
Tssr71904 7 31041777 to 31041809 32 - TSS region transcription start site region 71904
Tssr71905 7 31041812 to 31041823 11 - TSS region transcription start site region 71905
Cpgi18831 7 31041876 to 31042309 433 CpG island CpG island 18831
Tssr71906 7 31042076 to 31042085 9 - TSS region transcription start site region 71906
Tssr71907 7 31042087 to 31042091 4 - TSS region transcription start site region 71907
Tssr71908 7 31042106 to 31042174 68 - TSS region transcription start site region 71908
Tssr71909 7 31042305 to 31042333 28 - TSS region transcription start site region 71909
Tssr71910 7 31042337 to 31042353 16 - TSS region transcription start site region 71910
Tssr71911 7 31042357 to 31042389 32 - TSS region transcription start site region 71911
Fxyd7 7 31042515 to 31051454 8939 - protein coding gene FXYD domain-containing ion transport regulator 7
Tssr71912 7 31051411 to 31051422 11 - TSS region transcription start site region 71912
Tssr71913 7 31051431 to 31051488 57 - TSS region transcription start site region 71913
Tssr71914 7 31051494 to 31051505 11 - TSS region transcription start site region 71914
Fxyd1 7 31051678 to 31055874 4196 - protein coding gene FXYD domain-containing ion transport regulator 1
Cpgi18832 7 31052049 to 31053048 999 CpG island CpG island 18832
Tssr71915 7 31053074 to 31053090 16 - TSS region transcription start site region 71915
Tssr71916 7 31053123 to 31053152 29 - TSS region transcription start site region 71916
Tssr71917 7 31053444 to 31053463 19 - TSS region transcription start site region 71917
Tssr71918 7 31053556 to 31053567 11 - TSS region transcription start site region 71918
Tssr71919 7 31053846 to 31053862 16 - TSS region transcription start site region 71919
Tssr71920 7 31054354 to 31054383 29 - TSS region transcription start site region 71920
Tssr2192 7 31054577 to 31054610 33 - TSS region transcription start site region 2192
Tssr71921 7 31054768 to 31054779 11 - TSS region transcription start site region 71921
Tssr71922 7 31054798 to 31054814 16 - TSS region transcription start site region 71922
Tssr71923 7 31054815 to 31054839 24 - TSS region transcription start site region 71923
Tssr71924 7 31055367 to 31055397 30 - TSS region transcription start site region 71924
Tssr71925 7 31055594 to 31055659 65 - TSS region transcription start site region 71925
Lgi4 7 31059342 to 31070935 11593 + protein coding gene leucine-rich repeat LGI family, member 4
Tssr65835 7 31059360 to 31059382 22 + TSS region transcription start site region 65835
Tssr65836 7 31059388 to 31059410 22 + TSS region transcription start site region 65836
Tssr65837 7 31059423 to 31059439 16 + TSS region transcription start site region 65837
Tssr65838 7 31059547 to 31059635 88 + TSS region transcription start site region 65838
Tssr65839 7 31059642 to 31059657 15 + TSS region transcription start site region 65839
Tssr65840 7 31059673 to 31059699 26 + TSS region transcription start site region 65840
Tssr65841 7 31059852 to 31059876 24 + TSS region transcription start site region 65841
Tssr65842 7 31059906 to 31059920 14 + TSS region transcription start site region 65842
Tssr65843 7 31059922 to 31059941 19 + TSS region transcription start site region 65843
Tssr65844 7 31060063 to 31060081 18 + TSS region transcription start site region 65844
Tssr65845 7 31060095 to 31060143 48 + TSS region transcription start site region 65845
Cpgi18833 7 31067404 to 31067802 398 CpG island CpG island 18833
Fxyd3 7 31070535 to 31076697 6162 - protein coding gene FXYD domain-containing ion transport regulator 3
Tssr71926 7 31070630 to 31070636 6 - TSS region transcription start site region 71926
Tssr71927 7 31073678 to 31073693 15 - TSS region transcription start site region 71927
Tssr71928 7 31076656 to 31076675 19 - TSS region transcription start site region 71928
Hpn 7 31098725 to 31115290 16565 - protein coding gene hepsin
Cpgi18834 7 31103238 to 31103654 416 CpG island CpG island 18834
Tssr71929 7 31110870 to 31110905 35 - TSS region transcription start site region 71929
Tssr71930 7 31111005 to 31111016 11 - TSS region transcription start site region 71930
Tssr71931 7 31111148 to 31111158 10 - TSS region transcription start site region 71931
Tssr71932 7 31114700 to 31114716 16 - TSS region transcription start site region 71932
Tssr71933 7 31115227 to 31115308 81 - TSS region transcription start site region 71933
Cpgi18835 7 31115935 to 31116124 189 CpG island CpG island 18835
Scn1b 7 31116524 to 31127003 10479 - protein coding gene sodium channel, voltage-gated, type I, beta
Tssr71934 7 31116892 to 31116904 12 - TSS region transcription start site region 71934
Cpgi18836 7 31125116 to 31125425 309 CpG island CpG island 18836
Cpgi18837 7 31126194 to 31127645 1451 CpG island CpG island 18837
Tssr71935 7 31126716 to 31126725 9 - TSS region transcription start site region 71935
Tssr71936 7 31126759 to 31126772 13 - TSS region transcription start site region 71936
Tssr71937 7 31126921 to 31126934 13 - TSS region transcription start site region 71937
Tssr71938 7 31126950 to 31126992 42 - TSS region transcription start site region 71938
Tssr71939 7 31126993 to 31127042 49 - TSS region transcription start site region 71939
Tssr71940 7 31127164 to 31127177 13 - TSS region transcription start site region 71940
Gramd1a 7 31130127 to 31155896 25769 - protein coding gene GRAM domain containing 1A
Tssr71941 7 31137123 to 31137148 25 - TSS region transcription start site region 71941
Tssr71942 7 31137306 to 31137319 13 - TSS region transcription start site region 71942
Tssr71943 7 31137322 to 31137348 26 - TSS region transcription start site region 71943
Tssr71944 7 31137425 to 31137443 18 - TSS region transcription start site region 71944
Tssr71945 7 31142627 to 31142632 5 - TSS region transcription start site region 71945
Cpgi18838 7 31142687 to 31142843 156 CpG island CpG island 18838
Tssr71946 7 31148834 to 31148857 23 - TSS region transcription start site region 71946
Tssr71947 7 31148936 to 31148947 11 - TSS region transcription start site region 71947
G630030J09Rik 7 31149528 to 31152707 3179 + antisense lncRNA gene RIKEN cDNA G630030J09 gene
Tssr71948 7 31149705 to 31149717 12 - TSS region transcription start site region 71948
Tssr65846 7 31149945 to 31149959 14 + TSS region transcription start site region 65846
Tssr65847 7 31149974 to 31149992 18 + TSS region transcription start site region 65847
Tssr65848 7 31150006 to 31150018 12 + TSS region transcription start site region 65848
Tssr65849 7 31150027 to 31150039 12 + TSS region transcription start site region 65849
Tssr65850 7 31150068 to 31150075 7 + TSS region transcription start site region 65850
Cpgi18839 7 31150445 to 31151838 1393 CpG island CpG island 18839
Tssr71949 7 31150981 to 31151070 89 - TSS region transcription start site region 71949
Tssr71950 7 31151145 to 31151171 26 - TSS region transcription start site region 71950
Tssr71951 7 31151390 to 31151414 24 - TSS region transcription start site region 71951
Tssr71952 7 31151427 to 31151448 21 - TSS region transcription start site region 71952
Tssr65851 7 31151513 to 31151536 23 + TSS region transcription start site region 65851
Tssr71953 7 31151641 to 31151674 33 - TSS region transcription start site region 71953
Tssr65852 7 31155678 to 31155689 11 + TSS region transcription start site region 65852
Tssr71954 7 31155869 to 31155896 27 - TSS region transcription start site region 71954
Tssr71955 7 31155957 to 31155981 24 - TSS region transcription start site region 71955
Tssr71956 7 31156234 to 31156244 10 - TSS region transcription start site region 71956
Tssr71957 7 31156361 to 31156400 39 - TSS region transcription start site region 71957
Tssr65853 7 31162060 to 31162072 12 + TSS region transcription start site region 65853
Tssr65854 7 31162097 to 31162105 8 + TSS region transcription start site region 65854
Gm10640 7 31162358 to 31170641 8283 + antisense lncRNA gene predicted gene 10640
D7Mit155 7 31175518 to 31175665 147 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 155
Gm9569 7 31182037 to 31182823 786 + pseudogene predicted gene 9569
Tssr65855 7 31207832 to 31207839 7 + TSS region transcription start site region 65855
Cpgi18840 7 31208195 to 31208577 382 CpG island CpG island 18840
Tssr65856 7 31208326 to 31208363 37 + TSS region transcription start site region 65856
Gm37292 7 31208357 to 31209114 757 + unclassified gene predicted gene, 37292
Tssr65857 7 31208370 to 31208390 20 + TSS region transcription start site region 65857
Tssr65858 7 31213298 to 31213311 13 + TSS region transcription start site region 65858
Tssr65859 7 31213343 to 31213350 7 + TSS region transcription start site region 65859
Scgb1b1-ps 7 31255891 to 31256277 386 - pseudogene secretoglobin, family 1B, member 1, pseudogene
Tssr71958 7 31256287 to 31256294 7 - TSS region transcription start site region 71958
Tssr65860 7 31263614 to 31263645 31 + TSS region transcription start site region 65860
Tssr2193 7 31263735 to 31263744 9 + TSS region transcription start site region 2193
Scgb2b1 7 31263757 to 31265768 2011 + protein coding gene secretoglobin, family 2B, member 1
Scgb1b2 7 31290519 to 31291816 1297 - protein coding gene secretoglobin, family 1B, member 2
Tssr65861 7 31291442 to 31291467 25 + TSS region transcription start site region 65861
Tssr71959 7 31291814 to 31291817 3 - TSS region transcription start site region 71959
Tssr65862 7 31302666 to 31302703 37 + TSS region transcription start site region 65862
Tssr65863 7 31302750 to 31302764 14 + TSS region transcription start site region 65863
Scgb2b2 7 31302769 to 31304977 2208 + protein coding gene secretoglobin, family 2B, member 2
Scgb2b3 7 31359038 to 31362072 3034 - protein coding gene secretoglobin, family 2B, member 3