Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:30433811-30554345

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82 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aplp1 7 30434982 to 30445535 10553 - protein coding gene amyloid beta (A4) precursor-like protein 1
Tssr65763 7 30435118 to 30435158 40 + TSS region transcription start site region 65763
Tssr71754 7 30435148 to 30435171 23 - TSS region transcription start site region 71754
Tssr71755 7 30435196 to 30435215 19 - TSS region transcription start site region 71755
Tssr71756 7 30435232 to 30435273 41 - TSS region transcription start site region 71756
Tssr71757 7 30435281 to 30435310 29 - TSS region transcription start site region 71757
Tssr71758 7 30435324 to 30435351 27 - TSS region transcription start site region 71758
Tssr71759 7 30435382 to 30435399 17 - TSS region transcription start site region 71759
Tssr71760 7 30435779 to 30435787 8 - TSS region transcription start site region 71760
Cocia17 7 30435779 to 30435779 0 QTL cocaine-induced activity, QTL 17
Tssr71761 7 30436988 to 30437014 26 - TSS region transcription start site region 71761
Tssr71762 7 30437017 to 30437062 45 - TSS region transcription start site region 71762
Tssr71763 7 30437065 to 30437083 18 - TSS region transcription start site region 71763
Tssr71764 7 30438211 to 30438233 22 - TSS region transcription start site region 71764
Cpgi18801 7 30439966 to 30440272 306 CpG island CpG island 18801
Tssr71765 7 30440028 to 30440045 17 - TSS region transcription start site region 71765
Tssr71766 7 30440319 to 30440336 17 - TSS region transcription start site region 71766
Tssr71767 7 30440409 to 30440446 37 - TSS region transcription start site region 71767
Tssr65764 7 30442208 to 30442235 27 + TSS region transcription start site region 65764
Tssr71768 7 30442254 to 30442277 23 - TSS region transcription start site region 71768
Tssr71769 7 30442281 to 30442303 22 - TSS region transcription start site region 71769
Tssr71770 7 30442862 to 30442873 11 - TSS region transcription start site region 71770
Cpgi18802 7 30444184 to 30446032 1848 CpG island CpG island 18802
Tssr71771 7 30444416 to 30444430 14 - TSS region transcription start site region 71771
Tssr71772 7 30444579 to 30444611 32 - TSS region transcription start site region 71772
Tssr71773 7 30445462 to 30445494 32 - TSS region transcription start site region 71773
Tssr71774 7 30445495 to 30445501 6 - TSS region transcription start site region 71774
Tssr71775 7 30445508 to 30445591 83 - TSS region transcription start site region 71775
Tssr2185 7 30445597 to 30445606 9 - TSS region transcription start site region 2185
Kirrel2 7 30447766 to 30457515 9749 - protein coding gene kirre like nephrin family adhesion molecule 2
Cpgi18803 7 30453282 to 30454443 1161 CpG island CpG island 18803
Tssr71776 7 30453788 to 30453811 23 - TSS region transcription start site region 71776
Tssr65765 7 30454552 to 30454559 7 + TSS region transcription start site region 65765
Gm45979 7 30454701 to 30455622 921 + lncRNA gene predicted gene, 45979
Cpgi18804 7 30456855 to 30457472 617 CpG island CpG island 18804
Tssr71777 7 30457030 to 30457070 40 - TSS region transcription start site region 71777
Tssr71778 7 30457397 to 30457435 38 - TSS region transcription start site region 71778
Tssr65766 7 30457484 to 30457493 9 + TSS region transcription start site region 65766
Tssr65767 7 30458243 to 30458254 11 + TSS region transcription start site region 65767
Tssr65768 7 30458280 to 30458293 13 + TSS region transcription start site region 65768
Nphs1 7 30458315 to 30487223 28908 + protein coding gene nephrosis 1, nephrin
Tssr65769 7 30459691 to 30459700 9 + TSS region transcription start site region 65769
Tssr65770 7 30459713 to 30459745 32 + TSS region transcription start site region 65770
Tssr65771 7 30459752 to 30459763 11 + TSS region transcription start site region 65771
Nphs1os 7 30462164 to 30465591 3427 - antisense lncRNA gene nephrosis 1 homolog, nephrin, opposite strand
Tssr65772 7 30465295 to 30465318 23 + TSS region transcription start site region 65772
Tssr65773 7 30465326 to 30465364 38 + TSS region transcription start site region 65773
Cpgi18805 7 30465354 to 30466232 878 CpG island CpG island 18805
Tssr65774 7 30465365 to 30465383 18 + TSS region transcription start site region 65774
Tssr65775 7 30465488 to 30465499 11 + TSS region transcription start site region 65775
Tssr65776 7 30465735 to 30465762 27 + TSS region transcription start site region 65776
Rps12-ps4 7 30484701 to 30485097 396 - pseudogene ribosomal protein S12, pseudogene 4
Tssr71779 7 30485182 to 30485183 1 - TSS region transcription start site region 71779
Prodh2 7 30493622 to 30513402 19780 + protein coding gene proline dehydrogenase (oxidase) 2
Tssr65777 7 30493631 to 30493666 35 + TSS region transcription start site region 65777
Cpgi18806 7 30493811 to 30494345 534 CpG island CpG island 18806
D7Mit344 7 30494940 to 30495059 119 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 344
Arhgap33os 7 30515122 to 30522193 7071 + antisense lncRNA gene Rho GTPase activating protein 33, opposite strand
Tssr65778 7 30515145 to 30515156 11 + TSS region transcription start site region 65778
Tssr2186 7 30515229 to 30515236 7 + TSS region transcription start site region 2186
Arhgap33 7 30522226 to 30535060 12834 - protein coding gene Rho GTPase activating protein 33
Tssr71780 7 30524421 to 30524426 5 - TSS region transcription start site region 71780
Tssr71781 7 30526162 to 30526182 20 - TSS region transcription start site region 71781
Tssr71782 7 30526458 to 30526464 6 - TSS region transcription start site region 71782
Cpgi18807 7 30534195 to 30535560 1365 CpG island CpG island 18807
Tssr71783 7 30534792 to 30534815 23 - TSS region transcription start site region 71783
Tssr71784 7 30535006 to 30535047 41 - TSS region transcription start site region 71784
Tssr71785 7 30535056 to 30535066 10 - TSS region transcription start site region 71785
Tssr71786 7 30535082 to 30535093 11 - TSS region transcription start site region 71786
Proser3 7 30539134 to 30552299 13165 - protein coding gene proline and serine rich 3
1700019A23Rik 7 30539666 to 30539861 195 + unclassified gene RIKEN cDNA 1700019A23 gene
D7Mit343 7 30550602 to 30550721 119 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 343
Cpgi18808 7 30551981 to 30552651 670 CpG island CpG island 18808
Tssr71787 7 30552255 to 30552316 61 - TSS region transcription start site region 71787
Tssr71788 7 30552346 to 30552375 29 - TSS region transcription start site region 71788
Tssr65779 7 30552532 to 30552564 32 + TSS region transcription start site region 65779
Hspb6 7 30552556 to 30555439 2883 + protein coding gene heat shock protein, alpha-crystallin-related, B6
Gm38670 7 30552828 to 30552904 76 + miRNA gene predicted gene, 38670
Cpgi18809 7 30553191 to 30553534 343 CpG island CpG island 18809
Tssr65780 7 30553263 to 30553272 9 + TSS region transcription start site region 65780
Tssr65781 7 30553293 to 30553309 16 + TSS region transcription start site region 65781
Cpgi18810 7 30554226 to 30554597 371 CpG island CpG island 18810