Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:28694957-28824988

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93 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fbxo27 7 28692849 to 28699338 6489 + protein coding gene F-box protein 27
Tssr71557 7 28695255 to 28695272 17 - TSS region transcription start site region 71557
Tssr65500 7 28709701 to 28709730 29 + TSS region transcription start site region 65500
Cpgi18716 7 28716517 to 28717066 549 CpG island CpG island 18716
Tssr65501 7 28716777 to 28716840 63 + TSS region transcription start site region 65501
Fbxo17 7 28716804 to 28738144 21340 + protein coding gene F-box protein 17
Tssr65502 7 28716846 to 28716861 15 + TSS region transcription start site region 65502
Cpgi18717 7 28732355 to 28733255 900 CpG island CpG island 18717
Tssr65503 7 28735049 to 28735063 14 + TSS region transcription start site region 65503
Tssr65504 7 28735958 to 28735969 11 + TSS region transcription start site region 65504
Mrps12 7 28739641 to 28741820 2179 - protein coding gene mitochondrial ribosomal protein S12
Tssr71558 7 28741716 to 28741731 15 - TSS region transcription start site region 71558
Tssr71559 7 28741736 to 28741745 9 - TSS region transcription start site region 71559
Tssr71560 7 28741749 to 28741777 28 - TSS region transcription start site region 71560
Cpgi18718 7 28741758 to 28742354 596 CpG island CpG island 18718
Tssr71561 7 28741780 to 28741843 63 - TSS region transcription start site region 71561
Tssr65505 7 28741975 to 28742013 38 + TSS region transcription start site region 65505
Sars2 7 28741992 to 28753871 11879 + protein coding gene seryl-aminoacyl-tRNA synthetase 2
Tssr65506 7 28756138 to 28756157 19 + TSS region transcription start site region 65506
Ccer2 7 28756174 to 28758968 2794 + protein coding gene coiled-coil glutamate-rich protein 2
Nfkbib 7 28758251 to 28766644 8393 - protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta
Tssr71562 7 28759944 to 28759956 12 - TSS region transcription start site region 71562
Tssr71563 7 28759957 to 28759988 31 - TSS region transcription start site region 71563
Tssr71564 7 28761705 to 28761728 23 - TSS region transcription start site region 71564
Tssr71565 7 28761770 to 28761818 48 - TSS region transcription start site region 71565
Tssr71566 7 28761834 to 28761846 12 - TSS region transcription start site region 71566
Tssr71567 7 28762128 to 28762137 9 - TSS region transcription start site region 71567
Tssr71568 7 28764611 to 28764617 6 - TSS region transcription start site region 71568
Cpgi18719 7 28766156 to 28766956 800 CpG island CpG island 18719
Tssr71569 7 28766191 to 28766225 34 - TSS region transcription start site region 71569
Tssr71570 7 28766275 to 28766323 48 - TSS region transcription start site region 71570
Tssr65507 7 28766276 to 28766323 47 + TSS region transcription start site region 65507
Tssr71571 7 28766431 to 28766442 11 - TSS region transcription start site region 71571
Tssr71572 7 28766445 to 28766468 23 - TSS region transcription start site region 71572
Tssr71573 7 28766469 to 28766510 41 - TSS region transcription start site region 71573
Sirt2 7 28766735 to 28788661 21926 + protein coding gene sirtuin 2
Tssr65508 7 28766747 to 28766822 75 + TSS region transcription start site region 65508
Tssr65509 7 28766837 to 28766849 12 + TSS region transcription start site region 65509
Tssr71574 7 28766976 to 28766986 10 - TSS region transcription start site region 71574
Tssr71575 7 28767112 to 28767117 5 - TSS region transcription start site region 71575
Tssr71576 7 28767124 to 28767154 30 - TSS region transcription start site region 71576
Tssr65510 7 28767221 to 28767226 5 + TSS region transcription start site region 65510
Tssr65511 7 28767233 to 28767244 11 + TSS region transcription start site region 65511
Tssr65512 7 28767626 to 28767642 16 + TSS region transcription start site region 65512
Tssr65513 7 28769774 to 28769782 8 + TSS region transcription start site region 65513
Gm19897 7 28774899 to 28781514 6615 - lncRNA gene predicted gene, 19897
Tssr71577 7 28781334 to 28781380 46 - TSS region transcription start site region 71577
Tssr65514 7 28781564 to 28781577 13 + TSS region transcription start site region 65514
Tssr65515 7 28784353 to 28784365 12 + TSS region transcription start site region 65515
Tssr65516 7 28785365 to 28785384 19 + TSS region transcription start site region 65516
Tssr65517 7 28787773 to 28787786 13 + TSS region transcription start site region 65517
Tssr65518 7 28787968 to 28788017 49 + TSS region transcription start site region 65518
Tssr65519 7 28788223 to 28788239 16 + TSS region transcription start site region 65519
Tssr65520 7 28788252 to 28788266 14 + TSS region transcription start site region 65520
Tssr65521 7 28788939 to 28788942 3 + TSS region transcription start site region 65521
Tssr65522 7 28788955 to 28788986 31 + TSS region transcription start site region 65522
Rinl 7 28788969 to 28798963 9994 + protein coding gene Ras and Rab interactor-like
n-TKctt24 7 28793988 to 28794060 72 - tRNA gene nuclear encoded tRNA lysine 24 (anticodon TTT)
Tssr65523 7 28795972 to 28796001 29 + TSS region transcription start site region 65523
Tssr65524 7 28796009 to 28796070 61 + TSS region transcription start site region 65524
Cpgi18720 7 28796537 to 28797344 807 CpG island CpG island 18720
Tssr71578 7 28803859 to 28803863 4 - TSS region transcription start site region 71578
Hnrnpl 7 28808546 to 28822268 13722 + protein coding gene heterogeneous nuclear ribonucleoprotein L
Cpgi18721 7 28808566 to 28809935 1369 CpG island CpG island 18721
Tssr65525 7 28808795 to 28808832 37 + TSS region transcription start site region 65525
Tssr71579 7 28809059 to 28809081 22 - TSS region transcription start site region 71579
Tssr65526 7 28809230 to 28809251 21 + TSS region transcription start site region 65526
Gm44702 7 28809304 to 28810497 1193 - antisense lncRNA gene predicted gene 44702
Tssr71580 7 28810201 to 28810238 37 - TSS region transcription start site region 71580
Cpgi18722 7 28810372 to 28811624 1252 CpG island CpG island 18722
Tssr71581 7 28810494 to 28810522 28 - TSS region transcription start site region 71581
Tssr65527 7 28810886 to 28810918 32 + TSS region transcription start site region 65527
Tssr65528 7 28810928 to 28810951 23 + TSS region transcription start site region 65528
Tssr2172 7 28810964 to 28810972 8 + TSS region transcription start site region 2172
Tssr2173 7 28811072 to 28811077 5 + TSS region transcription start site region 2173
Tssr65529 7 28813275 to 28813294 19 + TSS region transcription start site region 65529
Tssr65530 7 28813908 to 28813935 27 + TSS region transcription start site region 65530
Tssr65531 7 28813991 to 28814002 11 + TSS region transcription start site region 65531
Tssr65532 7 28814009 to 28814023 14 + TSS region transcription start site region 65532
Tssr65533 7 28814025 to 28814043 18 + TSS region transcription start site region 65533
Tssr65534 7 28814843 to 28814847 4 + TSS region transcription start site region 65534
Tssr65535 7 28815142 to 28815157 15 + TSS region transcription start site region 65535
Tssr65536 7 28818457 to 28818478 21 + TSS region transcription start site region 65536
Tssr65537 7 28818540 to 28818551 11 + TSS region transcription start site region 65537
Tssr65538 7 28818592 to 28818603 11 + TSS region transcription start site region 65538
Tssr65539 7 28818680 to 28818705 25 + TSS region transcription start site region 65539
Tssr65540 7 28818750 to 28818763 13 + TSS region transcription start site region 65540
Tssr65541 7 28818779 to 28818807 28 + TSS region transcription start site region 65541
Tssr65542 7 28820629 to 28820646 17 + TSS region transcription start site region 65542
Tssr65543 7 28820652 to 28820713 61 + TSS region transcription start site region 65543
Tssr65544 7 28822007 to 28822030 23 + TSS region transcription start site region 65544
Tssr65545 7 28822033 to 28822044 11 + TSS region transcription start site region 65545
Tssr65546 7 28822051 to 28822053 2 + TSS region transcription start site region 65546