Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:25129857-25229896

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pou2f2 7 25091114 to 25179993 88879 - protein coding gene POU domain, class 2, transcription factor 2
Tssr71190 7 25132440 to 25132455 15 - TSS region transcription start site region 71190
Tssr71191 7 25132473 to 25132493 20 - TSS region transcription start site region 71191
Cpgi18579 7 25133041 to 25133604 563 CpG island CpG island 18579
Tssr65093 7 25152456 to 25152462 6 + TSS region transcription start site region 65093
D930028M14Rik 7 25152457 to 25156627 4170 + lincRNA gene RIKEN cDNA D930028M14 gene
Tssr65094 7 25155955 to 25155981 26 + TSS region transcription start site region 65094
Tssr2139 7 25178624 to 25178630 6 - TSS region transcription start site region 2139
Cpgi18580 7 25178717 to 25180145 1428 CpG island CpG island 18580
Tssr71192 7 25179773 to 25179786 13 - TSS region transcription start site region 71192
Tssr71193 7 25179857 to 25179896 39 - TSS region transcription start site region 71193
Lrdm1 7 25179993 to 3303532 -21876461 QTL lymphoproliferation (Fas) renal disease modifier 1
Cpgi18581 7 25181140 to 25181321 181 CpG island CpG island 18581
Cpgi18582 7 25181649 to 25182235 586 CpG island CpG island 18582
Dedd2 7 25202838 to 25219873 17035 - protein coding gene death effector domain-containing DNA binding protein 2
Tssr71194 7 25205444 to 25205455 11 - TSS region transcription start site region 71194
Tssr71195 7 25205952 to 25205962 10 - TSS region transcription start site region 71195
Tssr65095 7 25206120 to 25206130 10 + TSS region transcription start site region 65095
Tssr71196 7 25206527 to 25206538 11 - TSS region transcription start site region 71196
Mir7048 7 25217668 to 25217725 57 - miRNA gene microRNA 7048
Cpgi18583 7 25218705 to 25220222 1517 CpG island CpG island 18583
Tssr65096 7 25218914 to 25218924 10 + TSS region transcription start site region 65096
Tssr65097 7 25219340 to 25219378 38 + TSS region transcription start site region 65097
4933430L12Rik 7 25219368 to 25220930 1562 + antisense lncRNA gene RIKEN cDNA 4933430L12 gene
Tssr71197 7 25219823 to 25219880 57 - TSS region transcription start site region 71197
Cpgi18584 7 25221021 to 25221869 848 CpG island CpG island 18584
Tssr65098 7 25221417 to 25221469 52 + TSS region transcription start site region 65098
Zfp526 7 25221425 to 25227507 6082 + protein coding gene zinc finger protein 526
Gsk3a 7 25228258 to 25237851 9593 - protein coding gene glycogen synthase kinase 3 alpha
9130221H12Rik 7 25228723 to 25230264 1541 + antisense lncRNA gene RIKEN cDNA 9130221H12 gene
Tssr71198 7 25229560 to 25229575 15 - TSS region transcription start site region 71198