Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:24611670-24741679

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Phldb3 7 24610763 to 24629297 18534 + protein coding gene pleckstrin homology like domain, family B, member 3
Cpgi18553 7 24612421 to 24613068 647 CpG island CpG island 18553
D7Mit180 7 24627166 to 24627280 114 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 180
Gm26550 7 24631145 to 24637916 6771 - antisense lncRNA gene predicted gene, 26550
Tssr65017 7 24636479 to 24636520 41 + TSS region transcription start site region 65017
Tssr65018 7 24636544 to 24636564 20 + TSS region transcription start site region 65018
Tssr65019 7 24636566 to 24636589 23 + TSS region transcription start site region 65019
Lypd3 7 24636570 to 24641118 4548 + protein coding gene Ly6/Plaur domain containing 3
Tssr2135 7 24636613 to 24636614 1 + TSS region transcription start site region 2135
Cpgi18554 7 24637071 to 24637385 314 CpG island CpG island 18554
Cpgi18555 7 24638337 to 24639142 805 CpG island CpG island 18555
Tssr65020 7 24638776 to 24638783 7 + TSS region transcription start site region 65020
Tssr65021 7 24638784 to 24638797 13 + TSS region transcription start site region 65021
Cpgi18556 7 24640029 to 24640298 269 CpG island CpG island 18556
Tssr65022 7 24640199 to 24640217 18 + TSS region transcription start site region 65022
Tssr65023 7 24655780 to 24655786 6 + TSS region transcription start site region 65023
Gm4598 7 24661294 to 24663109 1815 + lincRNA gene predicted gene 4598
2200007N16Rik 7 24666733 to 24666970 237 + unclassified gene RIKEN cDNA 2200007N16 gene
Tex101 7 24668012 to 24672050 4038 - protein coding gene testis expressed gene 101
Cpgi18557 7 24671973 to 24672284 311 CpG island CpG island 18557
Tssr71095 7 24672032 to 24672048 16 - TSS region transcription start site region 71095
Tssr71096 7 24672054 to 24672066 12 - TSS region transcription start site region 71096
Tssr71097 7 24672068 to 24672077 9 - TSS region transcription start site region 71097
Tssr71098 7 24676670 to 24676679 9 - TSS region transcription start site region 71098
Gm44971 7 24684306 to 24684642 336 + pseudogene predicted gene 44971
Gm1096 7 24687908 to 24695219 7311 + protein coding gene predicted gene 1096
Gm36776 7 24706415 to 24706617 202 - pseudogene predicted gene, 36776
Cpgi18558 7 24708958 to 24709154 196 CpG island CpG island 18558
Tssr2136 7 24709222 to 24709228 6 + TSS region transcription start site region 2136
Tssr65024 7 24709229 to 24709234 5 + TSS region transcription start site region 65024
Tssr65025 7 24709237 to 24709271 34 + TSS region transcription start site region 65025
Lypd10 7 24709242 to 24714535 5293 + protein coding gene Ly6/PLAUR domain containing 10
Tssr2137 7 24709287 to 24709290 3 + TSS region transcription start site region 2137
Lypd11 7 24715023 to 24726908 11885 - protein coding gene Ly6/PLAUR domain containing 11
Gm44972 7 24729720 to 24730125 405 - pseudogene predicted gene 44972