Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:23289481-30965674

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2589 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nlrp4e 7 23301192 to 23362277 61085 + protein coding gene NLR family, pyrin domain containing 4E
Krt8-ps 7 23357125 to 23358069 944 + pseudogene keratin 8, pseudogene
Tssr2126 7 23357681 to 23357716 35 - TSS region transcription start site region 2126
Tssr71063 7 23357762 to 23357773 11 - TSS region transcription start site region 71063
Tssr64927 7 23385888 to 23385895 7 + TSS region transcription start site region 64927
Nlrp5 7 23385889 to 23441922 56033 + protein coding gene NLR family, pyrin domain containing 5
Gm25196 7 23406996 to 23407105 109 + miRNA gene predicted gene, 25196
Gm18598 7 23446299 to 23446895 596 + pseudogene predicted gene, 18598
Gm18306 7 23447588 to 23448156 568 - pseudogene predicted gene, 18306
Vmn1r-ps84 7 23486375 to 23487297 922 - pseudogene vomeronasal 1 receptor, pseudogene 84
Vmn1r167 7 23504642 to 23505589 947 - protein coding gene vomeronasal 1 receptor 167
Gm8745 7 23526174 to 23526955 781 + pseudogene predicted gene 8745
Gm18195 7 23535569 to 23536274 705 - pseudogene predicted gene, 18195
Vmn1r168 7 23540720 to 23541649 929 + protein coding gene vomeronasal 1 receptor 168
Vmn1r169 7 23577185 to 23578099 914 + protein coding gene vomeronasal 1 receptor 169
Vmn1r170 7 23606175 to 23607089 914 + protein coding gene vomeronasal 1 receptor 170
Vmn1r171 7 23631988 to 23633568 1580 + protein coding gene vomeronasal 1 receptor 171
Vmn1r172 7 23658316 to 23660663 2347 + protein coding gene vomeronasal 1 receptor 172
Vmn1r173 7 23702342 to 23703283 941 + protein coding gene vomeronasal 1 receptor 173
Vmn1r174 7 23753911 to 23754852 941 + protein coding gene vomeronasal 1 receptor 174
Vmn1r-ps85 7 23778388 to 23779247 859 + pseudogene vomeronasal 1 receptor, pseudogene 85
Gm17780 7 23786616 to 23787227 611 + pseudogene predicted gene, 17780
Gm44576 7 23800874 to 23801284 410 + pseudogene predicted gene 44576
Vmn1r175 7 23808286 to 23809200 914 - protein coding gene vomeronasal 1 receptor 175
Vmn1r176 7 23834812 to 23835726 914 - protein coding gene vomeronasal 1 receptor 176
Vmn1r177 7 23865520 to 23866449 929 - protein coding gene vomeronasal 1 receptor 177
Gm18206 7 23870853 to 23871778 925 + pseudogene predicted gene, 18206
Vmn1r178 7 23893529 to 23894443 914 + protein coding gene vomeronasal 1 receptor 178
Vmn1r179 7 23928386 to 23929357 971 + protein coding gene vomeronasal 1 receptor 179
Gm10175 7 23946646 to 23947290 644 - pseudogene predicted gene 10175
Tssr71064 7 23947290 to 23947300 10 - TSS region transcription start site region 71064
Vmn1r180 7 23952387 to 23953356 969 + protein coding gene vomeronasal 1 receptor 180
Gm5324 7 23965140 to 23965615 475 + pseudogene predicted gene 5324
Tssr64928 7 23974684 to 23974695 11 + TSS region transcription start site region 64928
Vmn1r181 7 23983961 to 23985048 1087 + protein coding gene vomeronasal 1 receptor 181
V1rd19 7 24003111 to 24004028 917 + protein coding gene vomeronasal 1 receptor, D19
Vmn1r183 7 24054774 to 24055691 917 + protein coding gene vomeronasal 1 receptor 183
Ptma-ps1 7 24063832 to 24064140 308 + pseudogene prothymosin alpha, pseudogene 1
Gm36694 7 24071174 to 24077901 6727 - antisense lncRNA gene predicted gene, 36694
Gm44943 7 24073915 to 24077969 4054 + pseudogene predicted gene 44943
Cpgi18524 7 24081686 to 24082494 808 CpG island CpG island 18524
Tssr64929 7 24081888 to 24081948 60 + TSS region transcription start site region 64929
Zfp180 7 24081924 to 24107713 25789 + protein coding gene zinc finger protein 180
Tssr64930 7 24082186 to 24082198 12 + TSS region transcription start site region 64930
Cpgi18525 7 24105607 to 24105999 392 CpG island CpG island 18525
Zfp112 7 24112314 to 24127952 15638 + protein coding gene zinc finger protein 112
Tssr64931 7 24112351 to 24112396 45 + TSS region transcription start site region 64931
Gm44793 7 24112454 to 24116600 4146 - antisense lncRNA gene predicted gene 44793
Cpgi18526 7 24134036 to 24134509 473 CpG island CpG island 18526
Tssr71065 7 24134076 to 24134094 18 - TSS region transcription start site region 71065
Tssr64932 7 24134148 to 24134184 36 + TSS region transcription start site region 64932
Zfp235 7 24134169 to 24143241 9072 + protein coding gene zinc finger protein 235
Tssr64933 7 24134185 to 24134212 27 + TSS region transcription start site region 64933
Tssr64934 7 24175032 to 24175061 29 + TSS region transcription start site region 64934
Zfp114 7 24175060 to 24183188 8128 + protein coding gene zinc finger protein 114
Cpgi18527 7 24175067 to 24175301 234 CpG island CpG island 18527
Zfp111 7 24193215 to 24208149 14934 - protein coding gene zinc finger protein 111
Cpgi18528 7 24207573 to 24207764 191 CpG island CpG island 18528
Tssr71066 7 24208093 to 24208139 46 - TSS region transcription start site region 71066
Gm44796 7 24213134 to 24214385 1251 + unclassified non-coding RNA gene predicted gene 44796
Zfp109 7 24227795 to 24237598 9803 - protein coding gene zinc finger protein 109
Cpgi18529 7 24237505 to 24237827 322 CpG island CpG island 18529
Tssr64935 7 24254744 to 24254812 68 + TSS region transcription start site region 64935
Zfp108 7 24254794 to 24262445 7651 + protein coding gene zinc finger protein 108
Cpgi18530 7 24254806 to 24254991 185 CpG island CpG island 18530
Tssr64936 7 24270397 to 24270471 74 + TSS region transcription start site region 64936
Zfp93 7 24270420 to 24277794 7374 + protein coding gene zinc finger protein 93
Tssr64937 7 24280552 to 24280597 45 + TSS region transcription start site region 64937
Tssr64938 7 24280662 to 24280700 38 + TSS region transcription start site region 64938
Gm18126 7 24287293 to 24288265 972 - pseudogene predicted gene, 18126
Zfp61 7 24291039 to 24301232 10193 - protein coding gene zinc finger protein 61
Cpgi18531 7 24298709 to 24299855 1146 CpG island CpG island 18531
Tssr71067 7 24299320 to 24299368 48 - TSS region transcription start site region 71067
Tssr71068 7 24299387 to 24299406 19 - TSS region transcription start site region 71068
Zfp94 7 24301704 to 24316666 14962 - protein coding gene zinc finger protein 94
Cpgi18532 7 24302774 to 24303000 226 CpG island CpG island 18532
Cpgi18533 7 24316148 to 24316989 841 CpG island CpG island 18533
Tssr71069 7 24316590 to 24316659 69 - TSS region transcription start site region 71069
Gm44513 7 24318381 to 24318819 438 + pseudogene predicted gene 44513
Gm15465 7 24320005 to 24322784 2779 - pseudogene predicted gene 15465
Gm17982 7 24326978 to 24327896 918 - pseudogene predicted gene, 17982
Cpgi18534 7 24333069 to 24334035 966 CpG island CpG island 18534
Tescl 7 24333082 to 24333936 854 - protein coding gene tescalcin-like
Tssr71070 7 24333922 to 24333955 33 - TSS region transcription start site region 71070
Tssr71071 7 24333959 to 24333969 10 - TSS region transcription start site region 71071
Tssr71072 7 24333975 to 24333982 7 - TSS region transcription start site region 71072
Gm27592 7 24336340 to 24336465 125 - miRNA gene predicted gene, 27592
Tssr64939 7 24349188 to 24349201 13 + TSS region transcription start site region 64939
Tssr64940 7 24349210 to 24349227 17 + TSS region transcription start site region 64940
Lypd5 7 24349224 to 24353833 4609 + protein coding gene Ly6/Plaur domain containing 5
Gm38964 7 24355066 to 24355873 807 - lncRNA gene predicted gene, 38964
Tssr71073 7 24355809 to 24355824 15 - TSS region transcription start site region 71073
Kcnn4 7 24369825 to 24385212 15387 + protein coding gene potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
Tssr64941 7 24369837 to 24369879 42 + TSS region transcription start site region 64941
Tssr64942 7 24369960 to 24369978 18 + TSS region transcription start site region 64942
Tssr64943 7 24370007 to 24370016 9 + TSS region transcription start site region 64943
Tssr64944 7 24370020 to 24370030 10 + TSS region transcription start site region 64944
Tssr64945 7 24370084 to 24370093 9 + TSS region transcription start site region 64945
Tssr64946 7 24370096 to 24370121 25 + TSS region transcription start site region 64946
Tssr64947 7 24370183 to 24370199 16 + TSS region transcription start site region 64947
Tssr64948 7 24370255 to 24370312 57 + TSS region transcription start site region 64948
Tssr64949 7 24370316 to 24370332 16 + TSS region transcription start site region 64949
Tssr64950 7 24370340 to 24370347 7 + TSS region transcription start site region 64950
Tssr64951 7 24370445 to 24370459 14 + TSS region transcription start site region 64951
Cpgi18535 7 24370450 to 24370601 151 CpG island CpG island 18535
Tssr64952 7 24370466 to 24370520 54 + TSS region transcription start site region 64952
Tssr71074 7 24372471 to 24372484 13 - TSS region transcription start site region 71074
Cpgi18536 7 24377042 to 24377798 756 CpG island CpG island 18536
Tssr64953 7 24377339 to 24377352 13 + TSS region transcription start site region 64953
Tssr64954 7 24378487 to 24378492 5 + TSS region transcription start site region 64954
Tssr64955 7 24381648 to 24381688 40 + TSS region transcription start site region 64955
Tssr64956 7 24386556 to 24386561 5 + TSS region transcription start site region 64956
Tssr64957 7 24387999 to 24388009 10 + TSS region transcription start site region 64957
Tssr64958 7 24389667 to 24389703 36 + TSS region transcription start site region 64958
Cpgi18537 7 24399186 to 24400088 902 CpG island CpG island 18537
Tssr64959 7 24399606 to 24399673 67 + TSS region transcription start site region 64959
Smg9 7 24399619 to 24422778 23159 + protein coding gene smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)
Tssr64960 7 24399674 to 24399727 53 + TSS region transcription start site region 64960
Tssr64961 7 24399813 to 24399818 5 + TSS region transcription start site region 64961
Tssr71075 7 24399858 to 24399919 61 - TSS region transcription start site region 71075
Tssr64962 7 24399959 to 24399975 16 + TSS region transcription start site region 64962
Tssr64963 7 24399977 to 24400011 34 + TSS region transcription start site region 64963
Tssr64964 7 24400013 to 24400030 17 + TSS region transcription start site region 64964
Tssr64965 7 24402861 to 24402873 12 + TSS region transcription start site region 64965
Tssr64966 7 24403026 to 24403045 19 + TSS region transcription start site region 64966
Tssr64967 7 24407235 to 24407260 25 + TSS region transcription start site region 64967
D7Bwg1348 7 24422604 to 24422768 164 DNA segment DNA segment, Chr 7, Brigham & Women's Genetics 1348
Irgc1 7 24431919 to 24445682 13763 - protein coding gene immunity-related GTPase family, cinema 1
Tssr71076 7 24431963 to 24431966 3 - TSS region transcription start site region 71076
Cpgi18538 7 24432064 to 24433381 1317 CpG island CpG island 18538
Tssr71077 7 24433579 to 24433603 24 - TSS region transcription start site region 71077
Tssr71078 7 24435462 to 24435469 7 - TSS region transcription start site region 71078
Tssr71079 7 24435482 to 24435488 6 - TSS region transcription start site region 71079
Tssr71080 7 24435491 to 24435554 63 - TSS region transcription start site region 71080
Tssr71081 7 24435563 to 24435580 17 - TSS region transcription start site region 71081
Tssr2127 7 24435582 to 24435585 3 - TSS region transcription start site region 2127
Tssr2128 7 24442536 to 24442559 23 + TSS region transcription start site region 2128
Tssr71082 7 24445588 to 24445610 22 - TSS region transcription start site region 71082
Tssr71083 7 24445635 to 24445637 2 - TSS region transcription start site region 71083
Tssr71084 7 24445694 to 24445703 9 - TSS region transcription start site region 71084
Tssr64968 7 24445790 to 24445797 7 + TSS region transcription start site region 64968
Gm36159 7 24448354 to 24451327 2973 + lincRNA gene predicted gene, 36159
Tssr71085 7 24450626 to 24450636 10 - TSS region transcription start site region 71085
Tssr64969 7 24450776 to 24450804 28 + TSS region transcription start site region 64969
Tssr2129 7 24450841 to 24450847 6 + TSS region transcription start site region 2129
Tssr2130 7 24457681 to 24457685 4 - TSS region transcription start site region 2130
Tssr71086 7 24457758 to 24457769 11 - TSS region transcription start site region 71086
Tssr71087 7 24457825 to 24457836 11 - TSS region transcription start site region 71087
Tssr2131 7 24457910 to 24457921 11 + TSS region transcription start site region 2131
Tssr64970 7 24457993 to 24458013 20 + TSS region transcription start site region 64970
Tssr64971 7 24458044 to 24458077 33 + TSS region transcription start site region 64971
Tssr64972 7 24460031 to 24460063 32 + TSS region transcription start site region 64972
Tssr64973 7 24460149 to 24460159 10 + TSS region transcription start site region 64973
Tssr64974 7 24461483 to 24461494 11 + TSS region transcription start site region 64974
Tssr64975 7 24461562 to 24461569 7 + TSS region transcription start site region 64975
Tssr64976 7 24462463 to 24462466 3 + TSS region transcription start site region 64976
Tssr64977 7 24462475 to 24462496 21 + TSS region transcription start site region 64977
Plaur 7 24462484 to 24475968 13484 + protein coding gene plasminogen activator, urokinase receptor
Tssr64978 7 24470303 to 24470305 2 + TSS region transcription start site region 64978
Tssr64979 7 24472579 to 24472621 42 + TSS region transcription start site region 64979
Tssr64980 7 24474198 to 24474201 3 + TSS region transcription start site region 64980
Tssr64981 7 24474291 to 24474304 13 + TSS region transcription start site region 64981
Tssr64982 7 24475240 to 24475261 21 + TSS region transcription start site region 64982
Tssr64983 7 24475303 to 24475320 17 + TSS region transcription start site region 64983
Tssr64984 7 24475504 to 24475543 39 + TSS region transcription start site region 64984
Cpgi18539 7 24481037 to 24482889 1852 CpG island CpG island 18539
Tssr64985 7 24481980 to 24481987 7 + TSS region transcription start site region 64985
Tssr64986 7 24481991 to 24482076 85 + TSS region transcription start site region 64986
Cadm4 7 24482023 to 24504533 22510 + protein coding gene cell adhesion molecule 4
Cpgi18540 7 24499493 to 24500735 1242 CpG island CpG island 18540
Tssr64987 7 24499599 to 24499604 5 + TSS region transcription start site region 64987
Tssr64988 7 24500728 to 24500738 10 + TSS region transcription start site region 64988
Cpgi18541 7 24501552 to 24501762 210 CpG island CpG island 18541
Tssr64989 7 24501624 to 24501637 13 + TSS region transcription start site region 64989
Tssr64990 7 24504492 to 24504500 8 + TSS region transcription start site region 64990
Cpgi18542 7 24506744 to 24507961 1217 CpG island CpG island 18542
Tssr64991 7 24507014 to 24507024 10 + TSS region transcription start site region 64991
Tssr64992 7 24507057 to 24507095 38 + TSS region transcription start site region 64992
Zfp428 7 24507087 to 24515682 8595 + protein coding gene zinc finger protein 428
Tssr64993 7 24507099 to 24507110 11 + TSS region transcription start site region 64993
Tssr64994 7 24507122 to 24507139 17 + TSS region transcription start site region 64994
Tssr64995 7 24507141 to 24507194 53 + TSS region transcription start site region 64995
Tssr64996 7 24507204 to 24507215 11 + TSS region transcription start site region 64996
Tssr64997 7 24507227 to 24507240 13 + TSS region transcription start site region 64997
Tssr64998 7 24507291 to 24507310 19 + TSS region transcription start site region 64998
Tssr64999 7 24507312 to 24507402 90 + TSS region transcription start site region 64999
Tssr71088 7 24507435 to 24507457 22 - TSS region transcription start site region 71088
Tssr65000 7 24507701 to 24507704 3 + TSS region transcription start site region 65000
Gm50092 7 24510483 to 24512455 1972 - protein coding gene predicted gene, 50092
Tssr2132 7 24512421 to 24512423 2 - TSS region transcription start site region 2132
Tssr71089 7 24512433 to 24512438 5 - TSS region transcription start site region 71089
Tssr71090 7 24512444 to 24512483 39 - TSS region transcription start site region 71090
Tssr65001 7 24512644 to 24512651 7 + TSS region transcription start site region 65001
Cpgi18543 7 24530051 to 24530872 821 CpG island CpG island 18543
Tssr65002 7 24530645 to 24530693 48 + TSS region transcription start site region 65002
Irgq 7 24530689 to 24538600 7911 + protein coding gene immunity-related GTPase family, Q
Tssr65003 7 24530723 to 24530734 11 + TSS region transcription start site region 65003
Tssr65004 7 24530817 to 24530841 24 + TSS region transcription start site region 65004
Tssr2133 7 24530935 to 24530942 7 + TSS region transcription start site region 2133
Cpgi18544 7 24531285 to 24532007 722 CpG island CpG island 18544