Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:19839413-22142829

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159 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34891 7 19830061 to 19847605 17544 + lncRNA gene predicted gene, 34891
Tssr71041 7 19844548 to 19844552 4 - TSS region transcription start site region 71041
Gm44658 7 19846973 to 19847609 636 + lincRNA gene predicted gene 44658
Tssr64912 7 19851994 to 19852022 28 + TSS region transcription start site region 64912
Gm19345 7 19852003 to 19858350 6347 + protein coding gene predicted gene, 19345
Tssr64913 7 19852024 to 19852045 21 + TSS region transcription start site region 64913
Cpgi18519 7 19852036 to 19852409 373 CpG island CpG island 18519
Tssr64914 7 19852054 to 19852061 7 + TSS region transcription start site region 64914
Ceacam16 7 19852097 to 19861299 9202 - protein coding gene carcinoembryonic antigen-related cell adhesion molecule 16
Cpgi18520 7 19853658 to 19853879 221 CpG island CpG island 18520
Cpgi18521 7 19857705 to 19858176 471 CpG island CpG island 18521
Tssr71042 7 19861222 to 19861225 3 - TSS region transcription start site region 71042
Tssr71043 7 19861228 to 19861242 14 - TSS region transcription start site region 71043
Tssr71044 7 19861295 to 19861299 4 - TSS region transcription start site region 71044
Gm44659 7 19868121 to 19871438 3317 - lincRNA gene predicted gene 44659
Tssr71045 7 19871302 to 19871315 13 - TSS region transcription start site region 71045
Tssr71046 7 19871331 to 19871345 14 - TSS region transcription start site region 71046
Tssr71047 7 19871360 to 19871375 15 - TSS region transcription start site region 71047
Tssr71048 7 19871409 to 19871424 15 - TSS region transcription start site region 71048
Ceacam19 7 19875742 to 19887965 12223 - protein coding gene carcinoembryonic antigen-related cell adhesion molecule 19
Tssr64915 7 19877159 to 19877161 2 + TSS region transcription start site region 64915
Tssr71049 7 19880284 to 19880327 43 - TSS region transcription start site region 71049
Tssr71050 7 19880428 to 19880440 12 - TSS region transcription start site region 71050
Tssr64916 7 19887341 to 19887350 9 + TSS region transcription start site region 64916
Tssr71051 7 19887908 to 19887945 37 - TSS region transcription start site region 71051
Tssr71052 7 19887946 to 19887962 16 - TSS region transcription start site region 71052
Tssr71053 7 19888067 to 19888091 24 - TSS region transcription start site region 71053
Gm44660 7 19897334 to 19899798 2464 + unclassified gene predicted gene 44660
Pvr 7 19903578 to 19921143 17565 - protein coding gene poliovirus receptor
Tssr71054 7 19904705 to 19904716 11 - TSS region transcription start site region 71054
Tssr71055 7 19906542 to 19906545 3 - TSS region transcription start site region 71055
Tssr64917 7 19911802 to 19911805 3 + TSS region transcription start site region 64917
Gm16184 7 19911843 to 19912406 563 + pseudogene predicted gene 16184
Tssr64918 7 19915501 to 19915504 3 + TSS region transcription start site region 64918
Cpgi18522 7 19920155 to 19921287 1132 CpG island CpG island 18522
Gm16251 7 19920729 to 19927607 6878 + antisense lncRNA gene predicted gene 16251
Tssr71056 7 19921104 to 19921121 17 - TSS region transcription start site region 71056
Tssr71057 7 19921126 to 19921136 10 - TSS region transcription start site region 71057
Tssr71058 7 19921139 to 19921146 7 - TSS region transcription start site region 71058
Cpgi18523 7 19935330 to 19935674 344 CpG island CpG island 18523
Tssr71059 7 19935437 to 19935456 19 - TSS region transcription start site region 71059
Tssr71060 7 19935487 to 19935509 22 - TSS region transcription start site region 71060
Igsf23 7 19937305 to 19950756 13451 - protein coding gene immunoglobulin superfamily, member 23
Tssr64919 7 19939872 to 19939877 5 + TSS region transcription start site region 64919
Tssr71061 7 19940353 to 19940388 35 - TSS region transcription start site region 71061
Tssr64920 7 19940451 to 19940465 14 + TSS region transcription start site region 64920
Tssr64921 7 19946123 to 19946140 17 + TSS region transcription start site region 64921
Gm44651 7 19949201 to 19949572 371 - pseudogene predicted gene 44651
Tssr71062 7 19950729 to 19950748 19 - TSS region transcription start site region 71062
Rpl7a-ps8 7 19953783 to 19954583 800 + pseudogene ribosomal protein L7A, pseudogene 8
Tssr64922 7 19965365 to 19965420 55 + TSS region transcription start site region 64922
Ceacam20 7 19965412 to 19991104 25692 + protein coding gene carcinoembryonic antigen-related cell adhesion molecule 20
Tssr64923 7 19965428 to 19965433 5 + TSS region transcription start site region 64923
Tssr64924 7 19965460 to 19965467 7 + TSS region transcription start site region 64924
Tssr64925 7 19965475 to 19965486 11 + TSS region transcription start site region 64925
Tssr64926 7 19965539 to 19965543 4 + TSS region transcription start site region 64926
Tssr2123 7 19989456 to 19989459 3 + TSS region transcription start site region 2123
Nlrp9b 7 19991393 to 20062942 71549 + protein coding gene NLR family, pyrin domain containing 9B
Tssr2124 7 20009640 to 20009649 9 + TSS region transcription start site region 2124
n-R5s152 7 20010084 to 20010202 118 - rRNA gene nuclear encoded rRNA 5S 152
Gm8432 7 20013534 to 20013933 399 - pseudogene predicted gene 8432
Gm18877 7 20072777 to 20073315 538 + pseudogene predicted gene, 18877
Vmn1r91 7 20101158 to 20102081 923 + protein coding gene vomeronasal 1 receptor 91
Gm16442 7 20121656 to 20122579 923 - protein coding gene predicted gene 16442
Vmn1r93 7 20138123 to 20139088 965 - protein coding gene vomeronasal 1 receptor 93
Vmn1r94 7 20167460 to 20168377 917 - protein coding gene vomeronasal 1 receptor 94
Gm44598 7 20183080 to 20183229 149 - pseudogene predicted gene 44598
Vmn1r95 7 20193710 to 20194633 923 + protein coding gene vomeronasal 1 receptor, 95
Gm6164 7 20204684 to 20205607 923 - protein coding gene predicted gene 6164
Gm4498 7 20232908 to 20233828 920 - protein coding gene predicted gene 4498
Gm18049 7 20258315 to 20259127 812 + pseudogene predicted gene, 18049
Gm5890 7 20260685 to 20261685 1000 - protein coding gene predicted gene 5890
Gm18455 7 20270710 to 20271168 458 + pseudogene predicted gene, 18455
Gm4501 7 20289784 to 20290331 547 + pseudogene predicted gene 4501
Gm46007 7 20311024 to 20331895 20871 + pseudogene predicted gene, 46007
Gm4133 7 20333142 to 20334065 923 - protein coding gene predicted gene 4133
Vmn1r-ps79 7 20356798 to 20357760 962 - pseudogene vomeronasal 1 receptor, pseudogene 79
Gm5728 7 20374493 to 20375410 917 - protein coding gene predicted gene 5728
Vmn1r100 7 20417942 to 20418865 923 + protein coding gene vomeronasal 1 receptor 100
Vmn1r101 7 20441670 to 20442593 923 - protein coding gene vomeronasal 1 receptor 101
Gm10670 7 20473960 to 20474925 965 - protein coding gene predicted gene 10670
Vmn1r103 7 20509617 to 20510534 917 - protein coding gene vomeronasal 1 receptor 103
Vmn1r104 7 20533837 to 20534760 923 + protein coding gene vomeronasal 1 receptor 104
Gm5726 7 20544834 to 20545757 923 - protein coding gene predicted gene 5726
Gm4141 7 20575321 to 20576241 920 - protein coding gene predicted gene 4141
Gm18050 7 20590910 to 20591722 812 + pseudogene predicted gene, 18050
Gm4513 7 20593051 to 20599021 5970 - protein coding gene predicted gene 4513
Gm18456 7 20602026 to 20602568 542 + pseudogene predicted gene, 18456
Gm8486 7 20618446 to 20637932 19486 + pseudogene predicted gene 8486
Vmn1r107 7 20668918 to 20669841 923 + protein coding gene vomeronasal 1 receptor 107
Vmn1r-ps71 7 20680414 to 20681337 923 - pseudogene vomeronasal 1 receptor, pseudogene 71
Vmn1r111 7 20702296 to 20703216 920 - protein coding gene vomeronasal 1 receptor 111
Gm18052 7 20722453 to 20723262 809 + pseudogene predicted gene, 18052
Gm10668 7 20724801 to 20725824 1023 - protein coding gene predicted gene 10668
Gm18458 7 20734768 to 20735136 368 + pseudogene predicted gene, 18458
Vmn1r112 7 20771185 to 20772078 893 + protein coding gene vomeronasal 1 receptor 112
Tssr2125 7 20782171 to 20782175 4 + TSS region transcription start site region 2125
Vmn1r113 7 20787285 to 20788208 923 + protein coding gene vomeronasal 1 receptor 113
Vmn1r114 7 20811221 to 20812186 965 - protein coding gene vomeronasal 1 receptor 114
Vmn1r115 7 20844098 to 20844985 887 - protein coding gene vomeronasal 1 receptor 115
Vmn1r116 7 20872256 to 20873179 923 + protein coding gene vomeronasal 1 receptor 116
Vmn1r117 7 20883198 to 20884121 923 - protein coding gene vomeronasal 1 receptor 117
Vmn1r118 7 20911427 to 20912347 920 - protein coding gene vomeronasal 1 receptor 118
Gm18053 7 20936839 to 20937651 812 + pseudogene predicted gene, 18053
Gm4526 7 20939291 to 20940210 919 - pseudogene predicted gene 4526
Gm18459 7 20947981 to 20948523 542 + pseudogene predicted gene, 18459
Gm4528 7 20968224 to 20968771 547 + pseudogene predicted gene 4528
Gm46008 7 20989413 to 20992829 3416 + protein coding gene predicted gene, 46008
Vmn1r119 7 21011532 to 21012455 923 - protein coding gene vomeronasal 1 receptor 119
Vmn1r-ps73 7 21035174 to 21037293 2119 - pseudogene vomeronasal 1 receptor, pseudogene 73
Vmn1r120 7 21052867 to 21053784 917 - protein coding gene vomeronasal 1 receptor 120
Vmn1r-ps74 7 21092110 to 21092679 569 + pseudogene vomeronasal 1 receptor, pseudogene 74
Vmn1r121 7 21097569 to 21098513 944 - protein coding gene vomeronasal 1 receptor 121
Vmn1r122 7 21133211 to 21134128 917 - protein coding gene vomeronasal 1 receptor 122
Vmn1r123 7 21162185 to 21163108 923 + protein coding gene vomeronasal 1 receptor 123
Gm18054 7 21182242 to 21183056 814 + pseudogene predicted gene, 18054
Gm5157 7 21184560 to 21185616 1056 - protein coding gene predicted gene 5157
Gm18460 7 21194597 to 21195060 463 + pseudogene predicted gene, 18460
Gm4536 7 21229656 to 21230197 541 + pseudogene predicted gene 4536
Vmn1r124 7 21259694 to 21260617 923 - protein coding gene vomeronasal 1 receptor 124
Vmn1r125 7 21272179 to 21273102 923 + protein coding gene vomeronasal 1 receptor 125
Vmn1r126 7 21300502 to 21301467 965 - protein coding gene vomeronasal 1 receptor 126
Vmn1r127 7 21318944 to 21319861 917 - protein coding gene vomeronasal 1 receptor 127
Vmn1r128 7 21349373 to 21350296 923 + protein coding gene vomeronasal 1 receptor 128
Vmn1r129 7 21360368 to 21361291 923 - protein coding gene vomeronasal 1 receptor 129
Vmn1r-ps75 7 21392341 to 21393260 919 - pseudogene vomeronasal 1 receptor, pseudogene 75
Gm18055 7 21424547 to 21425338 791 + pseudogene predicted gene, 18055
Gm6882 7 21427000 to 21427941 941 - protein coding gene predicted gene 6882
Gm18461 7 21436852 to 21437271 419 + pseudogene predicted gene, 18461
Gm4541 7 21453328 to 21467439 14111 + pseudogene predicted gene 4541
Vmn1r130 7 21511780 to 21512703 923 + protein coding gene vomeronasal 1 receptor 130
Vmn1r-ps76 7 21523277 to 21524200 923 - pseudogene vomeronasal 1 receptor, pseudogene 76
Vmn1r131 7 21545170 to 21546090 920 - protein coding gene vomeronasal 1 receptor 131
Gm18056 7 21565325 to 21566134 809 + pseudogene predicted gene, 18056
Gm4545 7 21568095 to 21568697 602 - pseudogene predicted gene 4545
Gm18462 7 21577652 to 21578068 416 + pseudogene predicted gene, 18462
Vmn1r132 7 21614092 to 21614985 893 + protein coding gene vomeronasal 1 receptor 132
Gm8600 7 21670547 to 21676420 5873 - pseudogene predicted gene 8600
Gm18463 7 21685414 to 21685887 473 + pseudogene predicted gene, 18463
Gm4548 7 21720460 to 21720968 508 + pseudogene predicted gene 4548
Gm4175 7 21760531 to 21761475 944 - protein coding gene predicted gene 4175
Gm4177 7 21795811 to 21796728 917 - protein coding gene predicted gene 4177
Gm44554 7 21813476 to 21813622 146 - pseudogene predicted gene 44554
Vmn1r135 7 21832351 to 21833274 923 + protein coding gene vomeronasal 1 receptor 135
Gm5725 7 21843344 to 21844267 923 - protein coding gene predicted gene 5725
Vmn1r-ps77 7 21875360 to 21876280 920 - pseudogene vomeronasal 1 receptor, pseudogene 77
Gm18057 7 21907345 to 21908086 741 + pseudogene predicted gene, 18057
Gm5891 7 21909434 to 21921291 11857 - protein coding gene predicted gene 5891
Gm18464 7 21919645 to 21920064 419 + pseudogene predicted gene, 18464
Gm16443 7 21936134 to 21956428 20294 + pseudogene predicted gene 16443
Vmn1r137 7 21994587 to 21995510 923 + protein coding gene vomeronasal 1 receptor 137
Vmn1r-ps78 7 22006084 to 22007007 923 - pseudogene vomeronasal 1 receptor, pseudogene 78
Vmn1r138 7 22027977 to 22028897 920 - protein coding gene vomeronasal 1 receptor 138
Gm18058 7 22048123 to 22048862 739 + pseudogene predicted gene, 18058
Gm6176 7 22050481 to 22051504 1023 - protein coding gene predicted gene 6176
Gm18465 7 22060442 to 22060810 368 + pseudogene predicted gene, 18465
Vmn1r139 7 22096867 to 22097760 893 + protein coding gene vomeronasal 1 receptor 139
Gm16451 7 22117322 to 22118245 923 - protein coding gene predicted pseudogene 16451
Gm10666 7 22133776 to 22134741 965 - protein coding gene predicted gene 10666