Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:19705611-19840403

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tomm40 7 19701313 to 19715429 14116 - protein coding gene translocase of outer mitochondrial membrane 40
Tssr71019 7 19710239 to 19710243 4 - TSS region transcription start site region 71019
Tssr71020 7 19713717 to 19713733 16 - TSS region transcription start site region 71020
Cpgi18509 7 19714623 to 19716188 1565 CpG island CpG island 18509
Gm20512 7 19715016 to 19721731 6715 + antisense lncRNA gene predicted gene 20512
Tssr71021 7 19715255 to 19715280 25 - TSS region transcription start site region 71021
Tssr71022 7 19715382 to 19715393 11 - TSS region transcription start site region 71022
Tssr71023 7 19715395 to 19715460 65 - TSS region transcription start site region 71023
Gm38955 7 19715623 to 19720152 4529 + lncRNA gene predicted gene, 38955
Nectin2 7 19716644 to 19749573 32929 - protein coding gene nectin cell adhesion molecule 2
Tssr71024 7 19717492 to 19717511 19 - TSS region transcription start site region 71024
Cpgi18510 7 19732806 to 19733205 399 CpG island CpG island 18510
Tssr71025 7 19733126 to 19733137 11 - TSS region transcription start site region 71025
Tssr71026 7 19733158 to 19733167 9 - TSS region transcription start site region 71026
Tssr71027 7 19733171 to 19733179 8 - TSS region transcription start site region 71027
Cpgi18511 7 19748906 to 19750023 1117 CpG island CpG island 18511
Tssr71028 7 19749464 to 19749542 78 - TSS region transcription start site region 71028
Gm34744 7 19749672 to 19790390 40718 + lncRNA gene predicted gene, 34744
Tssr64898 7 19749904 to 19749941 37 + TSS region transcription start site region 64898
Tssr64899 7 19749954 to 19749968 14 + TSS region transcription start site region 64899
Bcam 7 19756138 to 19770532 14394 - protein coding gene basal cell adhesion molecule
Tssr64900 7 19756202 to 19756237 35 + TSS region transcription start site region 64900
Tssr71029 7 19756784 to 19756804 20 - TSS region transcription start site region 71029
Tssr71030 7 19760085 to 19760111 26 - TSS region transcription start site region 71030
Gm45114 7 19760906 to 19762254 1348 - unclassified gene predicted gene 45114
Tssr71031 7 19764690 to 19764701 11 - TSS region transcription start site region 71031
Cpgi18512 7 19766715 to 19766974 259 CpG island CpG island 18512
Cpgi18513 7 19770359 to 19770871 512 CpG island CpG island 18513
Tssr71032 7 19770485 to 19770504 19 - TSS region transcription start site region 71032
Tssr71033 7 19770509 to 19770526 17 - TSS region transcription start site region 71033
Gm26600 7 19770611 to 19775403 4792 + antisense lncRNA gene predicted gene, 26600
Cblc 7 19779718 to 19796809 17091 - protein coding gene Casitas B-lineage lymphoma c
Cpgi18514 7 19796521 to 19796880 359 CpG island CpG island 18514
Tssr71034 7 19796789 to 19796829 40 - TSS region transcription start site region 71034
Tssr64901 7 19796918 to 19796933 15 + TSS region transcription start site region 64901
Bcl3 7 19808462 to 19822767 14305 - protein coding gene B cell leukemia/lymphoma 3
Cpgi18515 7 19809423 to 19809835 412 CpG island CpG island 18515
Tssr64902 7 19809578 to 19809587 9 + TSS region transcription start site region 64902
Gm16175 7 19809609 to 19811872 2263 + antisense lncRNA gene predicted gene 16175
Cpgi18516 7 19811014 to 19811616 602 CpG island CpG island 18516
Tssr64903 7 19815873 to 19815898 25 + TSS region transcription start site region 64903
Gm16174 7 19816553 to 19818625 2072 + antisense lncRNA gene predicted gene 16174
Tssr64904 7 19816578 to 19816594 16 + TSS region transcription start site region 64904
Tssr64905 7 19816613 to 19816631 18 + TSS region transcription start site region 64905
Cpgi18517 7 19817477 to 19817651 174 CpG island CpG island 18517
Tssr64906 7 19817717 to 19817732 15 + TSS region transcription start site region 64906
Tssr71035 7 19818804 to 19818848 44 - TSS region transcription start site region 71035
Tssr71036 7 19820204 to 19820214 10 - TSS region transcription start site region 71036
Cpgi18518 7 19822168 to 19823004 836 CpG island CpG island 18518
Tssr71037 7 19822698 to 19822776 78 - TSS region transcription start site region 71037
Tssr64907 7 19822897 to 19822916 19 + TSS region transcription start site region 64907
Tssr64908 7 19822928 to 19822943 15 + TSS region transcription start site region 64908
Tssr64909 7 19822958 to 19822967 9 + TSS region transcription start site region 64909
Tssr71038 7 19824248 to 19824259 11 - TSS region transcription start site region 71038
Tssr64910 7 19824480 to 19824498 18 + TSS region transcription start site region 64910
Gm34891 7 19830061 to 19847605 17544 + lncRNA gene predicted gene, 34891
Tssr71039 7 19831871 to 19831900 29 - TSS region transcription start site region 71039
Tssr71040 7 19831940 to 19831958 18 - TSS region transcription start site region 71040
Tssr64911 7 19832056 to 19832108 52 + TSS region transcription start site region 64911