Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:19696784-19816804

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94 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Apoe 7 19696244 to 19699188 2944 - protein coding gene apolipoprotein E
Cpgi18507 7 19696521 to 19697078 557 CpG island CpG island 18507
Tssr64888 7 19696780 to 19696790 10 + TSS region transcription start site region 64888
Tssr70989 7 19696794 to 19696805 11 - TSS region transcription start site region 70989
Tssr70990 7 19696806 to 19696824 18 - TSS region transcription start site region 70990
Tssr2118 7 19696831 to 19696864 33 + TSS region transcription start site region 2118
Tssr2119 7 19696840 to 19696841 1 - TSS region transcription start site region 2119
Tssr70991 7 19696851 to 19696854 3 - TSS region transcription start site region 70991
Tssr70992 7 19696859 to 19696866 7 - TSS region transcription start site region 70992
Tssr70993 7 19696868 to 19696895 27 - TSS region transcription start site region 70993
Tssr64889 7 19696874 to 19696897 23 + TSS region transcription start site region 64889
Tssr2120 7 19696903 to 19696914 11 + TSS region transcription start site region 2120
Tssr70994 7 19696909 to 19696910 1 - TSS region transcription start site region 70994
Tssr70995 7 19696914 to 19696943 29 - TSS region transcription start site region 70995
Tssr64890 7 19696920 to 19696931 11 + TSS region transcription start site region 64890
Tssr2121 7 19696935 to 19696940 5 + TSS region transcription start site region 2121
Tssr64891 7 19696943 to 19696959 16 + TSS region transcription start site region 64891
Tssr70996 7 19696947 to 19696969 22 - TSS region transcription start site region 70996
Tssr64892 7 19696976 to 19696990 14 + TSS region transcription start site region 64892
Tssr70997 7 19696981 to 19697035 54 - TSS region transcription start site region 70997
Tssr64893 7 19697011 to 19697084 73 + TSS region transcription start site region 64893
Tssr70998 7 19697043 to 19697055 12 - TSS region transcription start site region 70998
Tssr70999 7 19697061 to 19697111 50 - TSS region transcription start site region 70999
Tssr64894 7 19697465 to 19697498 33 + TSS region transcription start site region 64894
Tssr71000 7 19697504 to 19697522 18 - TSS region transcription start site region 71000
Tssr71001 7 19697534 to 19697588 54 - TSS region transcription start site region 71001
Tssr64895 7 19697561 to 19697577 16 + TSS region transcription start site region 64895
Tssr64896 7 19697587 to 19697601 14 + TSS region transcription start site region 64896
Tssr71002 7 19697594 to 19697607 13 - TSS region transcription start site region 71002
Tssr71003 7 19697612 to 19697635 23 - TSS region transcription start site region 71003
Tssr71004 7 19697640 to 19697653 13 - TSS region transcription start site region 71004
Tssr2122 7 19697655 to 19697665 10 - TSS region transcription start site region 2122
D7Mit57 7 19697771 to 19697919 148 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 57
Sluc30 7 19697771 to 19697919 148 QTL susceptibility to lung cancer 30
Tssr71005 7 19697991 to 19697998 7 - TSS region transcription start site region 71005
Tssr71006 7 19698024 to 19698031 7 - TSS region transcription start site region 71006
Tssr71007 7 19698082 to 19698093 11 - TSS region transcription start site region 71007
Tssr71008 7 19698188 to 19698199 11 - TSS region transcription start site region 71008
Tssr71009 7 19698206 to 19698261 55 - TSS region transcription start site region 71009
Tssr71010 7 19698350 to 19698381 31 - TSS region transcription start site region 71010
Tssr71011 7 19698383 to 19698405 22 - TSS region transcription start site region 71011
Cpgi18508 7 19698399 to 19698801 402 CpG island CpG island 18508
Tssr71012 7 19698419 to 19698435 16 - TSS region transcription start site region 71012
Tssr71013 7 19699045 to 19699063 18 - TSS region transcription start site region 71013
Tssr71014 7 19699594 to 19699607 13 - TSS region transcription start site region 71014
Tssr71015 7 19699719 to 19699737 18 - TSS region transcription start site region 71015
Tssr71016 7 19699955 to 19699961 6 - TSS region transcription start site region 71016
Tssr71017 7 19700404 to 19700434 30 - TSS region transcription start site region 71017
Tssr71018 7 19700445 to 19700458 13 - TSS region transcription start site region 71018
Tssr64897 7 19701309 to 19701329 20 + TSS region transcription start site region 64897
Tomm40 7 19701313 to 19715429 14116 - protein coding gene translocase of outer mitochondrial membrane 40
Tssr71019 7 19710239 to 19710243 4 - TSS region transcription start site region 71019
Tssr71020 7 19713717 to 19713733 16 - TSS region transcription start site region 71020
Cpgi18509 7 19714623 to 19716188 1565 CpG island CpG island 18509
Gm20512 7 19715016 to 19721731 6715 + antisense lncRNA gene predicted gene 20512
Tssr71021 7 19715255 to 19715280 25 - TSS region transcription start site region 71021
Tssr71022 7 19715382 to 19715393 11 - TSS region transcription start site region 71022
Tssr71023 7 19715395 to 19715460 65 - TSS region transcription start site region 71023
Gm38955 7 19715623 to 19720152 4529 + lncRNA gene predicted gene, 38955
Nectin2 7 19716644 to 19749573 32929 - protein coding gene nectin cell adhesion molecule 2
Tssr71024 7 19717492 to 19717511 19 - TSS region transcription start site region 71024
Cpgi18510 7 19732806 to 19733205 399 CpG island CpG island 18510
Tssr71025 7 19733126 to 19733137 11 - TSS region transcription start site region 71025
Tssr71026 7 19733158 to 19733167 9 - TSS region transcription start site region 71026
Tssr71027 7 19733171 to 19733179 8 - TSS region transcription start site region 71027
Cpgi18511 7 19748906 to 19750023 1117 CpG island CpG island 18511
Tssr71028 7 19749464 to 19749542 78 - TSS region transcription start site region 71028
Gm34744 7 19749672 to 19790390 40718 + lncRNA gene predicted gene, 34744
Tssr64898 7 19749904 to 19749941 37 + TSS region transcription start site region 64898
Tssr64899 7 19749954 to 19749968 14 + TSS region transcription start site region 64899
Bcam 7 19756138 to 19770532 14394 - protein coding gene basal cell adhesion molecule
Tssr64900 7 19756202 to 19756237 35 + TSS region transcription start site region 64900
Tssr71029 7 19756784 to 19756804 20 - TSS region transcription start site region 71029
Tssr71030 7 19760085 to 19760111 26 - TSS region transcription start site region 71030
Gm45114 7 19760906 to 19762254 1348 - unclassified gene predicted gene 45114
Tssr71031 7 19764690 to 19764701 11 - TSS region transcription start site region 71031
Cpgi18512 7 19766715 to 19766974 259 CpG island CpG island 18512
Cpgi18513 7 19770359 to 19770871 512 CpG island CpG island 18513
Tssr71032 7 19770485 to 19770504 19 - TSS region transcription start site region 71032
Tssr71033 7 19770509 to 19770526 17 - TSS region transcription start site region 71033
Gm26600 7 19770611 to 19775403 4792 + antisense lncRNA gene predicted gene, 26600
Cblc 7 19779718 to 19796809 17091 - protein coding gene Casitas B-lineage lymphoma c
Cpgi18514 7 19796521 to 19796880 359 CpG island CpG island 18514
Tssr71034 7 19796789 to 19796829 40 - TSS region transcription start site region 71034
Tssr64901 7 19796918 to 19796933 15 + TSS region transcription start site region 64901
Bcl3 7 19808462 to 19822767 14305 - protein coding gene B cell leukemia/lymphoma 3
Cpgi18515 7 19809423 to 19809835 412 CpG island CpG island 18515
Tssr64902 7 19809578 to 19809587 9 + TSS region transcription start site region 64902
Gm16175 7 19809609 to 19811872 2263 + antisense lncRNA gene predicted gene 16175
Cpgi18516 7 19811014 to 19811616 602 CpG island CpG island 18516
Tssr64903 7 19815873 to 19815898 25 + TSS region transcription start site region 64903
Gm16174 7 19816553 to 19818625 2072 + antisense lncRNA gene predicted gene 16174
Tssr64904 7 19816578 to 19816594 16 + TSS region transcription start site region 64904
Tssr64905 7 19816613 to 19816631 18 + TSS region transcription start site region 64905