Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:19579355-19679451

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp296 7 19577287 to 19580656 3369 + protein coding gene zinc finger protein 296
Clasrp 7 19581035 to 19604486 23451 - protein coding gene CLK4-associating serine/arginine rich protein
Tssr70939 7 19584354 to 19584364 10 - TSS region transcription start site region 70939
Cpgi18502 7 19585954 to 19587020 1066 CpG island CpG island 18502
Tssr70940 7 19586417 to 19586430 13 - TSS region transcription start site region 70940
Tssr70941 7 19586449 to 19586462 13 - TSS region transcription start site region 70941
Tssr70942 7 19592795 to 19592801 6 - TSS region transcription start site region 70942
Tssr70943 7 19592810 to 19592829 19 - TSS region transcription start site region 70943
Gm26890 7 19597293 to 19602294 5001 - lincRNA gene predicted gene, 26890
Cpgi18503 7 19603879 to 19604685 806 CpG island CpG island 18503
Tssr70944 7 19604427 to 19604438 11 - TSS region transcription start site region 70944
Tssr70945 7 19604444 to 19604492 48 - TSS region transcription start site region 70945
Relb 7 19606217 to 19629438 23221 - protein coding gene avian reticuloendotheliosis viral (v-rel) oncogene related B
Cpgi18504 7 19619415 to 19620072 657 CpG island CpG island 18504
Tssr70946 7 19622381 to 19622397 16 - TSS region transcription start site region 70946
Cpgi18505 7 19628375 to 19629956 1581 CpG island CpG island 18505
Tssr70947 7 19628403 to 19628429 26 - TSS region transcription start site region 70947
Tssr70948 7 19628669 to 19628675 6 - TSS region transcription start site region 70948
Tssr64873 7 19628978 to 19628998 20 + TSS region transcription start site region 64873
Tssr70949 7 19629355 to 19629451 96 - TSS region transcription start site region 70949
Clptm1 7 19631580 to 19665030 33450 - protein coding gene cleft lip and palate associated transmembrane protein 1
Tssr70950 7 19635798 to 19635820 22 - TSS region transcription start site region 70950
Tssr70951 7 19643089 to 19643122 33 - TSS region transcription start site region 70951
6430500G05Rik 7 19652635 to 19653869 1234 unclassified gene RIKEN cDNA 6430500G05 gene
Cpgi18506 7 19664191 to 19665823 1632 CpG island CpG island 18506
Tssr70952 7 19665005 to 19665028 23 - TSS region transcription start site region 70952
Tssr64874 7 19665449 to 19665482 33 + TSS region transcription start site region 64874
Apoc2 7 19671579 to 19677941 6362 - protein coding gene apolipoprotein C-II
Gm44805 7 19671584 to 19681423 9839 - protein coding gene predicted gene 44805
Tssr70953 7 19671693 to 19671703 10 - TSS region transcription start site region 70953
Tssr70954 7 19671789 to 19671828 39 - TSS region transcription start site region 70954
Tssr70955 7 19671829 to 19671850 21 - TSS region transcription start site region 70955
Tssr64875 7 19673222 to 19673254 32 + TSS region transcription start site region 64875
Tssr70956 7 19673588 to 19673600 12 - TSS region transcription start site region 70956
Tssr70957 7 19675900 to 19676005 105 - TSS region transcription start site region 70957
Tssr70958 7 19676749 to 19676767 18 - TSS region transcription start site region 70958
Tssr70959 7 19676782 to 19676800 18 - TSS region transcription start site region 70959
Tssr70960 7 19676824 to 19676866 42 - TSS region transcription start site region 70960
Tssr70961 7 19677020 to 19677032 12 - TSS region transcription start site region 70961
Tssr70962 7 19677947 to 19677952 5 - TSS region transcription start site region 70962
Apoc4 7 19678084 to 19681460 3376 - protein coding gene apolipoprotein C-IV
Tssr64876 7 19678179 to 19678210 31 + TSS region transcription start site region 64876