Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:19311186-19411201

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr64828 7 19316722 to 19316736 14 + TSS region transcription start site region 64828
Tssr64829 7 19319025 to 19319043 18 + TSS region transcription start site region 64829
Cpgi18469 7 19319522 to 19320353 831 CpG island CpG island 18469
Tssr2109 7 19319707 to 19319725 18 - TSS region transcription start site region 2109
Tssr70907 7 19320010 to 19320028 18 - TSS region transcription start site region 70907
Tssr70908 7 19320040 to 19320051 11 - TSS region transcription start site region 70908
D830036C21Rik 7 19320117 to 19342515 22398 - lincRNA gene RIKEN cDNA D830036C21 gene
Tssr64830 7 19320321 to 19320327 6 + TSS region transcription start site region 64830
Cpgi18470 7 19327129 to 19327548 419 CpG island CpG island 18470
Tssr70909 7 19327236 to 19327263 27 - TSS region transcription start site region 70909
Cpgi18471 7 19332556 to 19333492 936 CpG island CpG island 18471
Tssr64831 7 19332952 to 19332975 23 + TSS region transcription start site region 64831
Tssr64832 7 19333067 to 19333098 31 + TSS region transcription start site region 64832
Gm44698 7 19333129 to 19337655 4526 + lincRNA gene predicted gene 44698
Cpgi18472 7 19341826 to 19342952 1126 CpG island CpG island 18472
Tssr64833 7 19342259 to 19342265 6 + TSS region transcription start site region 64833
Tssr64834 7 19344542 to 19344555 13 + TSS region transcription start site region 64834
Ercc1 7 19344778 to 19356524 11746 + protein coding gene excision repair cross-complementing rodent repair deficiency, complementation group 1
Cpgi18473 7 19344947 to 19345653 706 CpG island CpG island 18473
Tssr64835 7 19345084 to 19345127 43 + TSS region transcription start site region 64835
Tssr64836 7 19345135 to 19345147 12 + TSS region transcription start site region 64836
Tssr64837 7 19345593 to 19345616 23 + TSS region transcription start site region 64837
Tssr64838 7 19345636 to 19345651 15 + TSS region transcription start site region 64838
Tssr64839 7 19345662 to 19345692 30 + TSS region transcription start site region 64839
Cd3eap 7 19356014 to 19359483 3469 - protein coding gene CD3E antigen, epsilon polypeptide associated protein
Cpgi18474 7 19359096 to 19360628 1532 CpG island CpG island 18474
Tssr70910 7 19359416 to 19359476 60 - TSS region transcription start site region 70910
Tssr70911 7 19359477 to 19359488 11 - TSS region transcription start site region 70911
Tssr64840 7 19359740 to 19359758 18 + TSS region transcription start site region 64840
Ppp1r13l 7 19359749 to 19378533 18784 + protein coding gene protein phosphatase 1, regulatory subunit 13 like
Cpgi18475 7 19360961 to 19361397 436 CpG island CpG island 18475
Tssr64841 7 19361186 to 19361201 15 + TSS region transcription start site region 64841
Tssr64842 7 19361207 to 19361262 55 + TSS region transcription start site region 64842
Cpgi18476 7 19361663 to 19362061 398 CpG island CpG island 18476
Cpgi18477 7 19363877 to 19364227 350 CpG island CpG island 18477
Cpgi18478 7 19368496 to 19368774 278 CpG island CpG island 18478
Tssr64843 7 19368502 to 19368553 51 + TSS region transcription start site region 64843
Cpgi18479 7 19369788 to 19370514 726 CpG island CpG island 18479
Cpgi18480 7 19375204 to 19375857 653 CpG island CpG island 18480
Cpgi18481 7 19381552 to 19382660 1108 CpG island CpG island 18481
Tssr64844 7 19382005 to 19382052 47 + TSS region transcription start site region 64844
Ercc2 7 19382039 to 19395692 13653 + protein coding gene excision repair cross-complementing rodent repair deficiency, complementation group 2
Gm26852 7 19382220 to 19392718 10498 - antisense lncRNA gene predicted gene, 26852
Mir343 7 19386643 to 19386717 74 + miRNA gene microRNA 343
Klc3 7 19394437 to 19404104 9667 - protein coding gene kinesin light chain 3
Cpgi18482 7 19399857 to 19400191 334 CpG island CpG island 18482
Tssr70912 7 19399859 to 19399909 50 - TSS region transcription start site region 70912
Cpgi18483 7 19403547 to 19404424 877 CpG island CpG island 18483
Tssr70913 7 19403790 to 19403818 28 - TSS region transcription start site region 70913
Tssr64845 7 19403909 to 19403924 15 + TSS region transcription start site region 64845
Tssr70914 7 19404082 to 19404130 48 - TSS region transcription start site region 70914
Cpgi18484 7 19405443 to 19405725 282 CpG island CpG island 18484
Gm38954 7 19405689 to 19408309 2620 + lncRNA gene predicted gene, 38954
Tssr64846 7 19411086 to 19411101 15 + TSS region transcription start site region 64846
Ckm 7 19411094 to 19421583 10489 + protein coding gene creatine kinase, muscle