Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:140880896-140960911

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sirt3 7 140863666 to 140882309 18643 - protein coding gene sirtuin 3
Cpgi19907 7 140881615 to 140882607 992 CpG island CpG island 19907
Tssr75527 7 140881811 to 140881849 38 - TSS region transcription start site region 75527
Tssr75528 7 140881857 to 140881871 14 - TSS region transcription start site region 75528
Tssr69860 7 140881898 to 140881910 12 + TSS region transcription start site region 69860
Tssr69861 7 140881960 to 140881983 23 + TSS region transcription start site region 69861
Tssr75529 7 140882252 to 140882272 20 - TSS region transcription start site region 75529
Tssr75530 7 140882274 to 140882330 56 - TSS region transcription start site region 75530
Tssr69862 7 140882381 to 140882426 45 + TSS region transcription start site region 69862
Psmd13 7 140882394 to 140898642 16248 + protein coding gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
Tssr69863 7 140882430 to 140882441 11 + TSS region transcription start site region 69863
Tssr69864 7 140890842 to 140890850 8 + TSS region transcription start site region 69864
Gm15542 7 140890887 to 140892080 1193 + pseudogene predicted gene 15542
Cox8b 7 140898945 to 140900446 1501 - protein coding gene cytochrome c oxidase subunit 8B
Tssr75531 7 140900385 to 140900396 11 - TSS region transcription start site region 75531
Tssr75532 7 140900401 to 140900419 18 - TSS region transcription start site region 75532
Tssr69865 7 140906002 to 140906033 31 + TSS region transcription start site region 69865
Tssr69866 7 140906049 to 140906091 42 + TSS region transcription start site region 69866
BC024386 7 140906064 to 140907979 1915 + lncRNA gene cDNA sequence BC023486
Tssr69867 7 140907071 to 140907076 5 + TSS region transcription start site region 69867
Cpgi19908 7 140908691 to 140909058 367 CpG island CpG island 19908
Tssr69868 7 140920857 to 140920881 24 + TSS region transcription start site region 69868
Tssr69869 7 140920896 to 140920911 15 + TSS region transcription start site region 69869
Nlrp6 7 140920902 to 140929192 8290 + protein coding gene NLR family, pyrin domain containing 6
Tssr69870 7 140920918 to 140920929 11 + TSS region transcription start site region 69870
Tssr69871 7 140920940 to 140920941 1 + TSS region transcription start site region 69871
Cpgi19909 7 140921623 to 140923416 1793 CpG island CpG island 19909
D7Ertd187e 7 140925474 to 140925697 223 DNA segment DNA segment, Chr 7, ERATO Doi 187, expressed
D7Mit257 7 140927048 to 140927168 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 257
Pgghg 7 140941391 to 140947664 6273 + protein coding gene protein glucosylgalactosylhydroxylysine glucosidase
Tssr75533 7 140941458 to 140941461 3 - TSS region transcription start site region 75533
Cpgi19910 7 140941483 to 140941951 468 CpG island CpG island 19910
Tssr69872 7 140941521 to 140941534 13 + TSS region transcription start site region 69872
Tssr69873 7 140941550 to 140941615 65 + TSS region transcription start site region 69873
Tssr69874 7 140941886 to 140941956 70 + TSS region transcription start site region 69874
Tssr69875 7 140942909 to 140942918 9 + TSS region transcription start site region 69875
Tssr69876 7 140943069 to 140943080 11 + TSS region transcription start site region 69876
Tssr69877 7 140943575 to 140943623 48 + TSS region transcription start site region 69877
Ifitm5 7 140948962 to 140950239 1277 - protein coding gene interferon induced transmembrane protein 5
Del(7Ifitm5-Ifitm6)1Masu 7 140948962 to 141016892 67930 chromosomal deletion deletion, Chr 7, M Azim Surani 1
Gm45717 7 140949222 to 140955937 6715 - protein coding gene predicted gene 45717
Tssr75534 7 140950236 to 140950257 21 - TSS region transcription start site region 75534
Tssr75535 7 140950282 to 140950291 9 - TSS region transcription start site region 75535
Tssr75536 7 140952181 to 140952185 4 - TSS region transcription start site region 75536
Tssr69878 7 140954445 to 140954451 6 + TSS region transcription start site region 69878
Ifitm2 7 140954839 to 140955961 1122 - protein coding gene interferon induced transmembrane protein 2
Tssr75537 7 140954942 to 140954976 34 - TSS region transcription start site region 75537
Tssr69879 7 140954990 to 140955014 24 + TSS region transcription start site region 69879
Tssr75538 7 140955148 to 140955160 12 - TSS region transcription start site region 75538
Tssr75539 7 140955438 to 140955493 55 - TSS region transcription start site region 75539
Tssr75540 7 140955696 to 140955715 19 - TSS region transcription start site region 75540
Tssr75541 7 140955817 to 140955822 5 - TSS region transcription start site region 75541
Tssr75542 7 140955902 to 140955913 11 - TSS region transcription start site region 75542
Tssr75543 7 140955915 to 140955926 11 - TSS region transcription start site region 75543
Tssr75544 7 140955960 to 140955997 37 - TSS region transcription start site region 75544
Tssr75545 7 140956003 to 140956014 11 - TSS region transcription start site region 75545
Tssr75546 7 140956175 to 140956182 7 - TSS region transcription start site region 75546
Tssr75547 7 140956273 to 140956284 11 - TSS region transcription start site region 75547
Tssr75548 7 140956296 to 140956315 19 - TSS region transcription start site region 75548