Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:48719006-48759019

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bmiq3 6 4503823 to 48726677 44222854 QTL body mass index QTL 3
Axtq2 6 4503823 to 48726677 44222854 QTL anxiety QTL 2
Aaj2 6 4503823 to 48726677 44222854 QTL anxiety in A/J 2
Gm28053 6 48718607 to 48752644 34037 + protein coding gene predicted gene, 28053
Gimap7 6 48718621 to 48724636 6015 + protein coding gene GTPase, IMAP family member 7
Tssr56194 6 48720438 to 48720445 7 + TSS region transcription start site region 56194
Tssr56195 6 48720474 to 48720481 7 + TSS region transcription start site region 56195
Tssr60759 6 48723622 to 48723660 38 - TSS region transcription start site region 60759
Tssr60760 6 48725561 to 48725603 42 - TSS region transcription start site region 60760
Tssr56196 6 48725781 to 48725793 12 + TSS region transcription start site region 56196
Srilp 6 48726556 to 75447710 26721154 QTL sleep response to influenza, light phase
D6Mit74 6 48726556 to 48726705 149 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 74
Obrq4 6 48726565 to 48726677 112 QTL obesity resistance QTL 4
D6Mit274 6 48726565 to 48726677 112 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 274
Tssr56197 6 48728079 to 48728086 7 + TSS region transcription start site region 56197
Tssr56198 6 48728141 to 48728157 16 + TSS region transcription start site region 56198
Tssr56199 6 48728163 to 48728174 11 + TSS region transcription start site region 56199
Tssr56200 6 48728184 to 48728192 8 + TSS region transcription start site region 56200
A130009E19Rik 6 48729549 to 48733665 4116 unclassified gene RIKEN cDNA A130009E19 gene
Tssr60761 6 48732669 to 48732683 14 - TSS region transcription start site region 60761
Tssr60762 6 48737022 to 48737065 43 - TSS region transcription start site region 60762
Tssr60763 6 48737111 to 48737123 12 - TSS region transcription start site region 60763
Tssr56201 6 48737332 to 48737340 8 + TSS region transcription start site region 56201
Tssr56202 6 48737364 to 48737394 30 + TSS region transcription start site region 56202
Tssr60764 6 48737900 to 48737931 31 - TSS region transcription start site region 60764
Gimap1os 6 48738346 to 48741444 3098 - unclassified non-coding RNA gene GTPase, IMAP family member 1, opposite strand
Tssr60765 6 48738883 to 48738899 16 - TSS region transcription start site region 60765
Tssr60766 6 48738905 to 48738913 8 - TSS region transcription start site region 60766
Tssr60767 6 48738917 to 48738932 15 - TSS region transcription start site region 60767
Tssr60768 6 48738952 to 48738966 14 - TSS region transcription start site region 60768
Tssr56203 6 48739006 to 48739019 13 + TSS region transcription start site region 56203
Tssr56204 6 48739039 to 48739096 57 + TSS region transcription start site region 56204
Gimap1 6 48739054 to 48743795 4741 + protein coding gene GTPase, IMAP family member 1
Tssr60769 6 48739187 to 48739204 17 - TSS region transcription start site region 60769
Tssr60770 6 48739207 to 48739221 14 - TSS region transcription start site region 60770
Tssr60771 6 48739244 to 48739255 11 - TSS region transcription start site region 60771
Tssr60772 6 48739459 to 48739463 4 - TSS region transcription start site region 60772
Tssr56205 6 48739868 to 48739877 9 + TSS region transcription start site region 56205
Tssr56206 6 48740012 to 48740024 12 + TSS region transcription start site region 56206
Tssr60773 6 48740613 to 48740632 19 - TSS region transcription start site region 60773
Tssr60774 6 48740764 to 48740774 10 - TSS region transcription start site region 60774
Tssr60775 6 48741328 to 48741344 16 - TSS region transcription start site region 60775
Tssr60776 6 48741434 to 48741449 15 - TSS region transcription start site region 60776
Tssr60777 6 48741462 to 48741473 11 - TSS region transcription start site region 60777
Tssr60778 6 48742010 to 48742030 20 - TSS region transcription start site region 60778
Cpgi17377 6 48742563 to 48743289 726 CpG island CpG island 17377
Tssr60779 6 48746094 to 48746104 10 - TSS region transcription start site region 60779
Tssr56207 6 48746169 to 48746180 11 + TSS region transcription start site region 56207
Tssr56208 6 48746188 to 48746212 24 + TSS region transcription start site region 56208
Gimap5 6 48746197 to 48754210 8013 + protein coding gene GTPase, IMAP family member 5
Tssr56209 6 48746223 to 48746234 11 + TSS region transcription start site region 56209
Tssr56210 6 48746237 to 48746302 65 + TSS region transcription start site region 56210
Tssr56211 6 48746707 to 48746718 11 + TSS region transcription start site region 56211
Tssr60780 6 48747501 to 48747519 18 - TSS region transcription start site region 60780
Tssr60781 6 48747535 to 48747547 12 - TSS region transcription start site region 60781
Tssr1832 6 48747663 to 48747679 16 - TSS region transcription start site region 1832
Tssr60782 6 48747741 to 48747755 14 - TSS region transcription start site region 60782
Tssr56212 6 48747924 to 48747957 33 + TSS region transcription start site region 56212
Gm44226 6 48754230 to 48755986 1756 - lincRNA gene predicted gene, 44226
4833403J16Rik 6 48755338 to 48756368 1030 + lincRNA gene RIKEN cDNA 4833403J16 gene
Eila2 6 125356785 to 48726556 -76630229 QTL ethanol induced locomotor activity 2