Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:67246937-67416834

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40314 5 67243802 to 67250234 6432 - lncRNA gene predicted gene, 40314
Gm42670 5 67259971 to 67261262 1291 - antisense lncRNA gene predicted gene 42670
Cpgi15930 5 67260463 to 67261363 900 CpG island CpG island 15930
Tmem33 5 67260565 to 67291461 30896 + protein coding gene transmembrane protein 33
Tssr46566 5 67260671 to 67260692 21 + TSS region transcription start site region 46566
Tssr46567 5 67260697 to 67260711 14 + TSS region transcription start site region 46567
Tssr1501 5 67260716 to 67260720 4 + TSS region transcription start site region 1501
Tssr46568 5 67260725 to 67260741 16 + TSS region transcription start site region 46568
Tssr46569 5 67260744 to 67260779 35 + TSS region transcription start site region 46569
Tssr46570 5 67260794 to 67260814 20 + TSS region transcription start site region 46570
Tssr46571 5 67260818 to 67260827 9 + TSS region transcription start site region 46571
Tssr46572 5 67260925 to 67260970 45 + TSS region transcription start site region 46572
Tssr51231 5 67261068 to 67261114 46 - TSS region transcription start site region 51231
Tssr51232 5 67269477 to 67269490 13 - TSS region transcription start site region 51232
Tssr51233 5 67269498 to 67269505 7 - TSS region transcription start site region 51233
Tssr46573 5 67287441 to 67287446 5 + TSS region transcription start site region 46573
D5Ncnp3 5 67295278 to 67295656 378 DNA segment DNA segment, Chr 5, National Center of Neurology and Psychiatry 3
Cpgi15931 5 67306541 to 67307671 1130 CpG island CpG island 15931
Slc30a9 5 67306937 to 67356834 49897 + protein coding gene solute carrier family 30 (zinc transporter), member 9
Tssr46574 5 67306941 to 67306977 36 + TSS region transcription start site region 46574
Tssr46575 5 67306978 to 67307014 36 + TSS region transcription start site region 46575
Tssr46576 5 67307024 to 67307033 9 + TSS region transcription start site region 46576
Tssr46577 5 67315786 to 67315806 20 + TSS region transcription start site region 46577
Tssr46578 5 67360367 to 67360377 10 + TSS region transcription start site region 46578
Gm43698 5 67360387 to 67366599 6212 + lincRNA gene predicted gene 43698
9430027B09Rik 5 67381178 to 67382135 957 unclassified gene RIKEN cDNA 9430027B09 gene
Bend4 5 67392147 to 67428310 36163 - protein coding gene BEN domain containing 4
D5Ncnp4 5 67393832 to 67393978 146 DNA segment DNA segment, Chr 5, National Center of Neurology and Psychiatry 4
Tssr51234 5 67394355 to 67394359 4 - TSS region transcription start site region 51234
Tssr46579 5 67395706 to 67395711 5 + TSS region transcription start site region 46579
Tssr46580 5 67404602 to 67404614 12 + TSS region transcription start site region 46580
Gm33345 5 67405468 to 67417978 12510 + lncRNA gene predicted gene, 33345