Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:135934158-136034161

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ywhag 5 135908409 to 135934616 26207 - protein coding gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
Gm40346 5 135930673 to 135934316 3643 - lncRNA gene predicted gene, 40346
Cpgi16773 5 135933938 to 135935080 1142 CpG island CpG island 16773
Tssr53780 5 135934557 to 135934568 11 - TSS region transcription start site region 53780
Tssr53781 5 135934590 to 135934613 23 - TSS region transcription start site region 53781
Tssr53782 5 135934619 to 135934633 14 - TSS region transcription start site region 53782
Tssr49205 5 135935089 to 135935120 31 + TSS region transcription start site region 49205
Tssr53783 5 135957510 to 135957521 11 - TSS region transcription start site region 53783
Tssr53784 5 135957531 to 135957571 40 - TSS region transcription start site region 53784
Tssr53785 5 135957580 to 135957590 10 - TSS region transcription start site region 53785
Cpgi16774 5 135957609 to 135957940 331 CpG island CpG island 16774
Tssr1667 5 135957882 to 135957899 17 + TSS region transcription start site region 1667
Tssr49206 5 135958103 to 135958107 4 + TSS region transcription start site region 49206
Ssc4d 5 135960220 to 135974535 14315 - protein coding gene scavenger receptor cysteine rich family, 4 domains
Tssr53786 5 135962265 to 135962274 9 - TSS region transcription start site region 53786
Tssr53787 5 135962275 to 135962328 53 - TSS region transcription start site region 53787
Cpgi16775 5 135962437 to 135963451 1014 CpG island CpG island 16775
Tssr49207 5 135962919 to 135962932 13 + TSS region transcription start site region 49207
Tssr49208 5 135962939 to 135962960 21 + TSS region transcription start site region 49208
Cpgi16776 5 135965461 to 135965928 467 CpG island CpG island 16776
Cpgi16777 5 135967804 to 135968141 337 CpG island CpG island 16777
Tssr1668 5 135974520 to 135974552 32 - TSS region transcription start site region 1668
Tssr49209 5 135980104 to 135980108 4 + TSS region transcription start site region 49209
Zp3 5 135980105 to 135988624 8519 + protein coding gene zona pellucida glycoprotein 3
Cpgi16778 5 135980313 to 135980644 331 CpG island CpG island 16778
Tssr49210 5 135984158 to 135984161 3 + TSS region transcription start site region 49210
Tssr49211 5 135984205 to 135984216 11 + TSS region transcription start site region 49211
Cpgi16779 5 135994678 to 135995250 572 CpG island CpG island 16779
Tssr49212 5 135994796 to 135994884 88 + TSS region transcription start site region 49212
Dtx2 5 135994800 to 136032872 38072 + protein coding gene deltex 2, E3 ubiquitin ligase
Tssr1669 5 136015186 to 136015203 17 + TSS region transcription start site region 1669