Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:122382444-122484912

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gpn3 5 122372508 to 122382771 10263 + protein coding gene GPN-loop GTPase 3
Gm32853 5 122380057 to 122394812 14755 - lncRNA gene predicted gene, 32853
Cpgi16551 5 122391714 to 122392713 999 CpG island CpG island 16551
Tssr53099 5 122391741 to 122391762 21 - TSS region transcription start site region 53099
Arpc3 5 122391878 to 122406181 14303 + protein coding gene actin related protein 2/3 complex, subunit 3
Tssr48682 5 122391890 to 122391928 38 + TSS region transcription start site region 48682
Tssr48683 5 122391942 to 122391958 16 + TSS region transcription start site region 48683
Tssr48684 5 122391959 to 122391960 1 + TSS region transcription start site region 48684
Tssr48685 5 122392270 to 122392274 4 + TSS region transcription start site region 48685
Tssr48686 5 122396747 to 122396753 6 + TSS region transcription start site region 48686
Tssr48687 5 122396838 to 122396895 57 + TSS region transcription start site region 48687
Tssr53100 5 122396890 to 122396903 13 - TSS region transcription start site region 53100
Tssr53101 5 122397013 to 122397025 12 - TSS region transcription start site region 53101
Tssr48688 5 122401629 to 122401650 21 + TSS region transcription start site region 48688
Tssr48689 5 122403356 to 122403404 48 + TSS region transcription start site region 48689
Tssr48690 5 122404140 to 122404195 55 + TSS region transcription start site region 48690
Tssr48691 5 122406074 to 122406115 41 + TSS region transcription start site region 48691
Gm42829 5 122408490 to 122411074 2584 + sense intronic lncRNA gene predicted gene 42829
D730048M23Rik 5 122419283 to 122420599 1316 unclassified gene RIKEN cDNA D730048M23 gene
Cpgi16552 5 122421970 to 122423116 1146 CpG island CpG island 16552
Tssr48692 5 122422440 to 122422495 55 + TSS region transcription start site region 48692
Anapc7 5 122422444 to 122444912 22468 + protein coding gene anaphase promoting complex subunit 7
Tssr48693 5 122422496 to 122422520 24 + TSS region transcription start site region 48693
Gm15846 5 122438596 to 122438915 319 - pseudogene predicted gene 15846
Atp2a2 5 122453513 to 122502225 48712 - protein coding gene ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
Tssr53102 5 122456929 to 122456959 30 - TSS region transcription start site region 53102
Tssr53103 5 122456986 to 122456999 13 - TSS region transcription start site region 53103
Tssr53104 5 122457026 to 122457047 21 - TSS region transcription start site region 53104
Tssr53105 5 122458483 to 122458501 18 - TSS region transcription start site region 53105
Tssr53106 5 122458517 to 122458536 19 - TSS region transcription start site region 53106
Tssr53107 5 122458542 to 122458551 9 - TSS region transcription start site region 53107
Tssr1625 5 122458556 to 122458567 11 - TSS region transcription start site region 1625
Tssr53108 5 122459495 to 122459532 37 - TSS region transcription start site region 53108
Tssr53109 5 122459538 to 122459559 21 - TSS region transcription start site region 53109
Tssr53110 5 122459604 to 122459620 16 - TSS region transcription start site region 53110
Tssr53111 5 122459625 to 122459636 11 - TSS region transcription start site region 53111
Tssr53112 5 122460111 to 122460148 37 - TSS region transcription start site region 53112
Tssr53113 5 122460696 to 122460713 17 - TSS region transcription start site region 53113
Tssr53114 5 122460938 to 122460954 16 - TSS region transcription start site region 53114
Tssr53115 5 122465975 to 122465992 17 - TSS region transcription start site region 53115
Tssr53116 5 122469484 to 122469542 58 - TSS region transcription start site region 53116
Tssr53117 5 122471207 to 122471256 49 - TSS region transcription start site region 53117
Tssr53118 5 122479566 to 122479570 4 - TSS region transcription start site region 53118
Tssr53119 5 122480407 to 122480415 8 - TSS region transcription start site region 53119
Gm43359 5 122482800 to 122484999 2199 - unclassified gene predicted gene 43359