Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:72561032-74245072

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D4Mit322 4 72600290 to 72600413 123 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 322
Aldoart1 4 72850583 to 72852634 2051 - protein coding gene aldolase 1 A, retrogene 1
Tssr42134 4 72852600 to 72852609 9 - TSS region transcription start site region 42134
Tssr42135 4 72852622 to 72852648 26 - TSS region transcription start site region 42135
Gm5287 4 72893781 to 72894378 597 + pseudogene predicted gene 5287
Tssr42136 4 72903712 to 72903716 4 - TSS region transcription start site region 42136
Gm25653 4 72906201 to 72906338 137 - snoRNA gene predicted gene, 25653
Gm11251 4 73029819 to 73036069 6250 + pseudogene predicted gene 11251
Gm25769 4 73114657 to 73114783 126 + snoRNA gene predicted gene, 25769
Gm11487 4 73401032 to 73405072 4040 - protein coding gene predicted gene 11487
Gm11486 4 73415301 to 73418690 3389 - pseudogene predicted gene 11486
Gm11485 4 73422148 to 73423319 1171 - pseudogene predicted gene 11485
Gm11488 4 73497615 to 73498477 862 - pseudogene predicted gene 11488
Gm24170 4 73589082 to 73589214 132 - snoRNA gene predicted gene, 24170
Gm38423 4 73605544 to 73611922 6378 + protein coding gene predicted gene, 38423
Gm11237 4 73622984 to 73627027 4043 + protein coding gene predicted gene 11237
Gm11236 4 73638121 to 73642161 4040 + protein coding gene predicted gene 11236
Gm11238 4 73650910 to 73657292 6382 + protein coding gene predicted gene 11238
Gm11239 4 73668354 to 73672396 4042 + protein coding gene predicted gene 11239
Gm428 4 73683516 to 73687558 4042 + protein coding gene predicted gene 428
Rasef 4 73714579 to 73790994 76415 - protein coding gene RAS and EF hand domain containing
Tssr42137 4 73718538 to 73718542 4 - TSS region transcription start site region 42137
Tssr42138 4 73771091 to 73771099 8 - TSS region transcription start site region 42138
Tssr42139 4 73771121 to 73771134 13 - TSS region transcription start site region 42139
Tssr42140 4 73771143 to 73771146 3 - TSS region transcription start site region 42140
Cpgi14387 4 73790339 to 73791355 1016 CpG island CpG island 14387
Tssr37631 4 73790901 to 73790904 3 + TSS region transcription start site region 37631
Tssr37632 4 73790916 to 73790940 24 + TSS region transcription start site region 37632
Tssr42141 4 73790993 to 73791053 60 - TSS region transcription start site region 42141
Tssr42142 4 73791138 to 73791153 15 - TSS region transcription start site region 42142
Gm11240 4 73791246 to 73798372 7126 + lncRNA gene predicted gene 11240
Gm13867 4 73864397 to 73865092 695 + pseudogene predicted gene 13867
Gm11758 4 73872219 to 73876266 4047 - protein coding gene predicted gene 11758
Gm11757 4 73887066 to 73891080 4014 - protein coding gene predicted gene 11757
Gm13871 4 73901906 to 73905921 4015 - protein coding gene predicted gene 13871
Gm11756 4 73916727 to 73920716 3989 - protein coding gene predicted gene 11756
2310002L09Rik 4 73939371 to 73950846 11475 - protein coding gene RIKEN cDNA 2310002L09 gene
Tssr42143 4 73950498 to 73950515 17 - TSS region transcription start site region 42143
Tssr42144 4 73950779 to 73950790 11 - TSS region transcription start site region 42144
Tssr42145 4 73950814 to 73950833 19 - TSS region transcription start site region 42145
Tssr42146 4 73950834 to 73950853 19 - TSS region transcription start site region 42146
Cpgi14388 4 74013260 to 74014244 984 CpG island CpG island 14388
Tssr37633 4 74013594 to 74013674 80 + TSS region transcription start site region 37633
Frmd3 4 74013603 to 74202214 188611 + protein coding gene FERM domain containing 3
Tssr1205 4 74043433 to 74043435 2 - TSS region transcription start site region 1205
Gm11760 4 74044388 to 74045183 795 + pseudogene predicted gene 11760
D4Mit142 4 74219337 to 74219454 117 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 142
Gm11405 4 74228197 to 74229749 1552 + pseudogene predicted gene 11405
Tssr37634 4 74242468 to 74242481 13 + TSS region transcription start site region 37634
Kdm4c 4 74242497 to 74405860 163363 + protein coding gene lysine (K)-specific demethylase 4C
Anxty 4 128115487 to 74219337 -53896150 QTL anxiety