Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:71842600-73862609

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm11233 4 71867988 to 71868977 989 + pseudogene predicted gene 11233
Gm11234 4 71980477 to 71999559 19082 + lincRNA gene predicted gene 11234
Tle1 4 72117142 to 72200919 83777 - protein coding gene transducin-like enhancer of split 1
Tssr42125 4 72137116 to 72137129 13 - TSS region transcription start site region 42125
Gm11250 4 72168768 to 72169449 681 + antisense lncRNA gene predicted gene 11250
Tssr42126 4 72169546 to 72169549 3 - TSS region transcription start site region 42126
Tssr42127 4 72169580 to 72169585 5 - TSS region transcription start site region 42127
Tssr42128 4 72193341 to 72193353 12 - TSS region transcription start site region 42128
Tssr42129 4 72198308 to 72198319 11 - TSS region transcription start site region 42129
Cpgi14385 4 72198985 to 72199320 335 CpG island CpG island 14385
Tssr42130 4 72199030 to 72199063 33 - TSS region transcription start site region 42130
Tssr42131 4 72199071 to 72199108 37 - TSS region transcription start site region 42131
Cpgi14386 4 72199638 to 72201789 2151 CpG island CpG island 14386
Tssr42132 4 72200739 to 72200746 7 - TSS region transcription start site region 42132
Tssr42133 4 72200833 to 72200928 95 - TSS region transcription start site region 42133
C630043F03Rik 4 72201244 to 72203930 2686 + lncRNA gene RIKEN cDNA C630043F03 gene
Tssr37630 4 72201258 to 72201365 107 + TSS region transcription start site region 37630
D4Mit85 4 72377575 to 72377715 140 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 85
D4Mit275 4 72514689 to 72514887 198 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 275
Gm11235 4 72542666 to 72542998 332 + pseudogene predicted gene 11235
D4Mit322 4 72600290 to 72600413 123 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 322
Aldoart1 4 72850583 to 72852634 2051 - protein coding gene aldolase 1 A, retrogene 1
Tssr42134 4 72852600 to 72852609 9 - TSS region transcription start site region 42134
Tssr42135 4 72852622 to 72852648 26 - TSS region transcription start site region 42135
Gm5287 4 72893781 to 72894378 597 + pseudogene predicted gene 5287
Tssr42136 4 72903712 to 72903716 4 - TSS region transcription start site region 42136
Gm25653 4 72906201 to 72906338 137 - snoRNA gene predicted gene, 25653
Gm11251 4 73029819 to 73036069 6250 + pseudogene predicted gene 11251
Gm25769 4 73114657 to 73114783 126 + snoRNA gene predicted gene, 25769
Gm11487 4 73401032 to 73405072 4040 - protein coding gene predicted gene 11487
Gm11486 4 73415301 to 73418690 3389 - pseudogene predicted gene 11486
Gm11485 4 73422148 to 73423319 1171 - pseudogene predicted gene 11485
Gm11488 4 73497615 to 73498477 862 - pseudogene predicted gene 11488
Gm24170 4 73589082 to 73589214 132 - snoRNA gene predicted gene, 24170
Gm38423 4 73605544 to 73611922 6378 + protein coding gene predicted gene, 38423
Gm11237 4 73622984 to 73627027 4043 + protein coding gene predicted gene 11237
Gm11236 4 73638121 to 73642161 4040 + protein coding gene predicted gene 11236
Gm11238 4 73650910 to 73657292 6382 + protein coding gene predicted gene 11238
Gm11239 4 73668354 to 73672396 4042 + protein coding gene predicted gene 11239
Gm428 4 73683516 to 73687558 4042 + protein coding gene predicted gene 428
Rasef 4 73714579 to 73790994 76415 - protein coding gene RAS and EF hand domain containing
Tssr42137 4 73718538 to 73718542 4 - TSS region transcription start site region 42137
Tssr42138 4 73771091 to 73771099 8 - TSS region transcription start site region 42138
Tssr42139 4 73771121 to 73771134 13 - TSS region transcription start site region 42139
Tssr42140 4 73771143 to 73771146 3 - TSS region transcription start site region 42140
Cpgi14387 4 73790339 to 73791355 1016 CpG island CpG island 14387
Tssr37631 4 73790901 to 73790904 3 + TSS region transcription start site region 37631
Tssr37632 4 73790916 to 73790940 24 + TSS region transcription start site region 37632
Tssr42141 4 73790993 to 73791053 60 - TSS region transcription start site region 42141
Tssr42142 4 73791138 to 73791153 15 - TSS region transcription start site region 42142
Gm11240 4 73791246 to 73798372 7126 + lncRNA gene predicted gene 11240