MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:54013352-54923592

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr41774	4	54028746 to 54028753	7	-	TSS region	transcription start site region 41774
Gm33893	4	54029718 to 54070691	40973	+	lncRNA gene	predicted gene, 33893
Gm12484	4	54151831 to 54163678	11847	-	lincRNA gene	predicted gene 12484
Gm34008	4	54183218 to 54191833	8615	+	lncRNA gene	predicted gene, 34008
Tssr41775	4	54190157 to 54190187	30	-	TSS region	transcription start site region 41775
Gm12469	4	54235670 to 54235876	206	-	pseudogene	predicted gene 12469
Tssr37311	4	54297857 to 54297881	24	+	TSS region	transcription start site region 37311
Gm25687	4	54468352 to 54468592	240	+	unclassified non-coding RNA gene	predicted gene, 25687
Gm34072	4	54550320 to 54551475	1155	-	lncRNA gene	predicted gene, 34072
Tpt1-ps2	4	54564623 to 54565143	520	+	pseudogene	tumor protein, translationally-controlled, pseudogene 2
D4Mit274	4	54571525 to 54571620	95		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 274
Gm29067	4	54645811 to 54646280	469	-	lincRNA gene	predicted gene 29067
Gm12478	4	54646542 to 54689451	42909	+	lincRNA gene	predicted gene 12478
Gm12480	4	54651903 to 54656077	4174	+	lincRNA gene	predicted gene 12480
Gm12477	4	54669622 to 54670192	570	-	pseudogene	predicted gene 12477
Gm24628	4	54710624 to 54710912	288	+	unclassified non-coding RNA gene	predicted gene, 24628
Cpgi14309	4	54758267 to 54758451	184		CpG island	CpG island 14309
Gm34133	4	54851245 to 54893939	42694	-	lncRNA gene	predicted gene, 34133
Gm12479	4	54853128 to 54854712	1584	+	pseudogene	predicted gene 12479