MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:53860670-54610876

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tmem38b	4	53826045 to 53862019	35974	+	protein coding gene	transmembrane protein 38B
n-R5s185	4	53860652 to 53860770	118	+	rRNA gene	nuclear encoded rRNA 5S 185
Gm12468	4	53877925 to 53878328	403	+	pseudogene	predicted gene 12468
Cpgi14308	4	53878656 to 53879062	406		CpG island	CpG island 14308
Gm23745	4	53905696 to 53905820	124	+	snoRNA gene	predicted gene, 23745
Gm33840	4	53948265 to 53951306	3041	-	lncRNA gene	predicted gene, 33840
D4Mit320	4	53973679 to 53973791	112		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 320
Gm24177	4	54004057 to 54004187	130	+	snoRNA gene	predicted gene, 24177
Tssr41774	4	54028746 to 54028753	7	-	TSS region	transcription start site region 41774
Gm33893	4	54029718 to 54070691	40973	+	lncRNA gene	predicted gene, 33893
Gm12484	4	54151831 to 54163678	11847	-	lincRNA gene	predicted gene 12484
Gm34008	4	54183218 to 54191833	8615	+	lncRNA gene	predicted gene, 34008
Tssr41775	4	54190157 to 54190187	30	-	TSS region	transcription start site region 41775
Gm12469	4	54235670 to 54235876	206	-	pseudogene	predicted gene 12469
Tssr37311	4	54297857 to 54297881	24	+	TSS region	transcription start site region 37311
Gm25687	4	54468352 to 54468592	240	+	unclassified non-coding RNA gene	predicted gene, 25687
Gm34072	4	54550320 to 54551475	1155	-	lncRNA gene	predicted gene, 34072
Tpt1-ps2	4	54564623 to 54565143	520	+	pseudogene	tumor protein, translationally-controlled, pseudogene 2
D4Mit274	4	54571525 to 54571620	95		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 274