Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:52110826-52612211

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D4Mit88 4 52154171 to 52154335 164 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 88
Tssr41707 4 52197211 to 52197217 6 - TSS region transcription start site region 41707
Tssr37273 4 52240860 to 52240872 12 + TSS region transcription start site region 37273
Gm12466 4 52240903 to 52241522 619 + pseudogene predicted gene 12466
Gm12467 4 52241712 to 52242456 744 + pseudogene predicted gene 12467
Gm12475 4 52360826 to 52362211 1385 - pseudogene predicted gene 12475
Smc2os 4 52430284 to 52438964 8680 - antisense lncRNA gene structural maintenance of chromosomes 2, opposite strand
Cpgi14294 4 52438884 to 52439658 774 CpG island CpG island 14294
Tssr37274 4 52439224 to 52439232 8 + TSS region transcription start site region 37274
Tssr37275 4 52439235 to 52439287 52 + TSS region transcription start site region 37275
Smc2 4 52439243 to 52488260 49017 + protein coding gene structural maintenance of chromosomes 2
Tssr37276 4 52440108 to 52440113 5 + TSS region transcription start site region 37276
Tmc4-ps 4 52443915 to 52444172 257 - pseudogene Tmc4 retrotransposed pseudogene
Tssr41708 4 52445415 to 52445440 25 - TSS region transcription start site region 41708
Tssr37277 4 52450856 to 52450866 10 + TSS region transcription start site region 37277
Tssr1174 4 52462964 to 52462977 13 + TSS region transcription start site region 1174
Tssr37278 4 52465928 to 52465941 13 + TSS region transcription start site region 37278
Vma21-ps 4 52496939 to 52497244 305 - pseudogene VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), pseudogene
Tssr37279 4 52596270 to 52596276 6 + TSS region transcription start site region 37279
Toporsl 4 52596274 to 52612424 16150 + protein coding gene topoisomerase I binding, arginine/serine-rich like
Tssr37280 4 52596285 to 52596299 14 + TSS region transcription start site region 37280
Tssr37281 4 52607204 to 52607215 11 + TSS region transcription start site region 37281