Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:49413870-49533887

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbpj-ps2 4 49430226 to 49444084 13858 + pseudogene recombination signal binding protein for immunoglobulin kappa J region, pseudogene 2
Tssr41649 4 49446293 to 49446312 19 - TSS region transcription start site region 41649
Acnat1 4 49447105 to 49473912 26807 - protein coding gene acyl-coenzyme A amino acid N-acyltransferase 1
Tssr41650 4 49447172 to 49447176 4 - TSS region transcription start site region 41650
Tssr41651 4 49451234 to 49451274 40 - TSS region transcription start site region 41651
Tssr41652 4 49473870 to 49473887 17 - TSS region transcription start site region 41652
Tssr41653 4 49473905 to 49473918 13 - TSS region transcription start site region 41653
Gm26424 4 49474307 to 49474410 103 + snRNA gene predicted gene, 26424
Gm33009 4 49474707 to 49487266 12559 + lncRNA gene predicted gene, 33009
9030417H13Rik 4 49478385 to 49481035 2650 unclassified gene RIKEN cDNA 9030417H13 gene
Tssr41654 4 49481034 to 49481044 10 - TSS region transcription start site region 41654
Tssr41655 4 49481098 to 49481108 10 - TSS region transcription start site region 41655
Tssr41656 4 49481117 to 49481128 11 - TSS region transcription start site region 41656
Tssr41657 4 49481168 to 49481182 14 - TSS region transcription start site region 41657
Tssr41658 4 49481197 to 49481208 11 - TSS region transcription start site region 41658
Tssr41659 4 49481273 to 49481309 36 - TSS region transcription start site region 41659
Gm32894 4 49488479 to 49504473 15994 + lncRNA gene predicted gene, 32894
Baat 4 49489422 to 49506557 17135 - protein coding gene bile acid-Coenzyme A: amino acid N-acyltransferase
Tssr41660 4 49506490 to 49506513 23 - TSS region transcription start site region 41660
Tssr41661 4 49506528 to 49506533 5 - TSS region transcription start site region 41661
Tssr41662 4 49506538 to 49506563 25 - TSS region transcription start site region 41662
Mrpl50 4 49512597 to 49521083 8486 - protein coding gene mitochondrial ribosomal protein L50
Cpgi14289 4 49520651 to 49521678 1027 CpG island CpG island 14289
Tssr41663 4 49521036 to 49521089 53 - TSS region transcription start site region 41663
Zfp189 4 49521176 to 49531517 10341 + protein coding gene zinc finger protein 189
Tssr37258 4 49521214 to 49521296 82 + TSS region transcription start site region 37258
1110065F06Rik 4 49532183 to 49533792 1609 unclassified gene RIKEN cDNA 1110065F06 gene