Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:43665335-43976433

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam221b 4 43659622 to 43668859 9237 - protein coding gene family with sequence similarity 221, member B
Tssr41474 4 43668800 to 43668831 31 - TSS region transcription start site region 41474
Tssr41475 4 43668833 to 43668863 30 - TSS region transcription start site region 41475
Cpgi14199 4 43668864 to 43669891 1027 CpG island CpG island 14199
Tmem8b 4 43668971 to 43692668 23697 + protein coding gene transmembrane protein 8B
Tssr41476 4 43669146 to 43669200 54 - TSS region transcription start site region 41476
Tssr41477 4 43669204 to 43669215 11 - TSS region transcription start site region 41477
Tssr36992 4 43669266 to 43669287 21 + TSS region transcription start site region 36992
Tssr36993 4 43669288 to 43669329 41 + TSS region transcription start site region 36993
Tssr36994 4 43669666 to 43669678 12 + TSS region transcription start site region 36994
Gm23257 4 43692686 to 43692817 131 + rRNA gene predicted gene, 23257
Olfr70 4 43695000 to 43700807 5807 - protein coding gene olfactory receptor 70
Olfr71 4 43705628 to 43706566 938 - protein coding gene olfactory receptor 71
Tssr36995 4 43727181 to 43727205 24 + TSS region transcription start site region 36995
Hrct1 4 43727198 to 43728110 912 + protein coding gene histidine rich carboxyl terminus 1
Tssr36996 4 43727206 to 43727243 37 + TSS region transcription start site region 36996
Tssr36997 4 43727245 to 43727262 17 + TSS region transcription start site region 36997
Tssr36998 4 43727276 to 43727313 37 + TSS region transcription start site region 36998
Spaar 4 43730034 to 43734534 4500 + lincRNA gene small regulatory polypeptide of amino acid response
Tssr36999 4 43730426 to 43730451 25 + TSS region transcription start site region 36999
Cpgi14200 4 43731032 to 43731219 187 CpG island CpG island 14200
2900073C16Rik 4 43748025 to 43748642 617 unclassified gene RIKEN cDNA 2900073C16 gene
A630077J23Rik 4 43751859 to 43759464 7605 + lncRNA gene RIKEN cDNA A630077J23 gene
D4Mit91 4 43760628 to 43760862 234 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 91
Sicd3 4 43760862 to 9395525 -34365337 QTL seizure-induced cell death 3
Olfr269-ps1 4 43767476 to 43767777 301 - pseudogene olfactory receptor 269, pseudogene 1
Olfr159 4 43770050 to 43771009 959 - protein coding gene olfactory receptor 159
Olfr29-ps1 4 43781365 to 43782327 962 - polymorphic pseudogene olfactory receptor 29, pseudogene 1
Tssr1157 4 43791624 to 43791635 11 + TSS region transcription start site region 1157
Gm12492 4 43798899 to 43800255 1356 - pseudogene predicted gene 12492
Olfr156 4 43820335 to 43821433 1098 - protein coding gene olfactory receptor 156
Gm30318 4 43823154 to 43830474 7320 + lncRNA gene predicted gene, 30318
Olfr157 4 43834752 to 43837643 2891 - protein coding gene olfactory receptor 157
Olfr155 4 43854292 to 43855463 1171 + protein coding gene olfactory receptor 155
Cpgi14201 4 43875038 to 43876493 1455 CpG island CpG island 14201
Tssr37000 4 43875524 to 43875558 34 + TSS region transcription start site region 37000
Reck 4 43875530 to 43944806 69276 + protein coding gene reversion-inducing-cysteine-rich protein with kazal motifs
Tssr37001 4 43875567 to 43875582 15 + TSS region transcription start site region 37001
Gm27265 4 43905078 to 43905154 76 + unclassified non-coding RNA gene predicted gene, 27265
Tssr37002 4 43937319 to 43937331 12 + TSS region transcription start site region 37002
Tssr37003 4 43937341 to 43937380 39 + TSS region transcription start site region 37003
Gm30377 4 43955718 to 43957476 1758 - lncRNA gene predicted gene, 30377
Cpgi14202 4 43957160 to 43958430 1270 CpG island CpG island 14202
Tssr37004 4 43957461 to 43957496 35 + TSS region transcription start site region 37004
Tssr37005 4 43957501 to 43957527 26 + TSS region transcription start site region 37005
Tssr37006 4 43957678 to 43957735 57 + TSS region transcription start site region 37006
Glipr2 4 43957702 to 43979118 21416 + protein coding gene GLI pathogenesis-related 2
Tssr37007 4 43965550 to 43965555 5 + TSS region transcription start site region 37007
Tssr1158 4 43966350 to 43966379 29 + TSS region transcription start site region 1158
Tssr41478 4 43972161 to 43972172 11 - TSS region transcription start site region 41478
Tssr37008 4 43972487 to 43972490 3 + TSS region transcription start site region 37008